FFCP PHASE1:Hg19::chr11:64428841..64428860,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9379|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8009|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000496291_5end|description=CAGE_peak_7_at_NRXN2_5end|id=chr11:64428841..64428860,-|ontology_enrichment_celltype=CL:0000055!1.08e-29!180;CL:0000057!2.33e-23!75;CL:0002620!1.04e-14!23;CL:0000680!4.23e-10!57;CL:0000056!4.23e-10!57;CL:0000355!4.23e-10!57;CL:0000188!7.14e-09!9;CL:0000183!3.41e-08!59;CL:0000187!3.45e-08!54|ontology_enrichment_celltype_v019=CL:0000680;9.62e-15;7!CL:0002620;2.59e-12;23!CL:0000056;3.62e-12;4!CL:0000188;2.17e-10;9!CL:0000346;2.94e-10;3!CL:1000428;2.94e-10;3!CL:0002559;2.94e-10;5!CL:0000515;6.48e-10;3!CL:0002592;5.70e-09;3!CL:0002556;4.56e-08;6!CL:0002494;9.16e-08;16!CL:0000569;4.66e-07;4|ontology_enrichment_celltype_v019_2=CL:0002620,3.37e-12,23;CL:0000515,3.97e-12,4;CL:0000057,8.99e-11,76;CL:0000188,2.22e-10,9;CL:0000346,2.67e-10,3;CL:1000428,2.67e-10,3;CL:0002559,2.70e-10,5;CL:0000680,1.22e-09,58;CL:0000056,1.22e-09,58;CL:0000355,1.22e-09,58;CL:0002592,7.56e-09,3;CL:0002556,5.61e-08,6;CL:0002494,9.95e-08,16;CL:0000569,4.73e-07,4;CL:0000011,4.73e-07,4;CL:0000048,4.90e-07,427;CL:0000723,9.06e-07,433|ontology_enrichment_development_v019=CL:0000515;3.62e-12;4!CL:0000011;4.66e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.57e-18!83;UBERON:0002329!1.57e-18!83;UBERON:0003077!1.57e-18!83;UBERON:0003059!1.57e-18!83;UBERON:0007282!1.57e-18!83;UBERON:0009618!1.57e-18!83;UBERON:0007285!1.57e-18!83;UBERON:0004290!5.56e-16!70;UBERON:0002199!1.10e-13!45;UBERON:0002416!1.10e-13!45;UBERON:0003102!3.34e-13!95;UBERON:0000486!4.13e-13!82;UBERON:0002097!5.70e-13!40;UBERON:0001134!2.85e-10!61;UBERON:0002036!2.85e-10!61;UBERON:0003082!2.85e-10!61;UBERON:0002385!2.86e-10!63;UBERON:0001015!2.86e-10!63;UBERON:0000383!2.86e-10!63;UBERON:0002067!1.75e-09!9;UBERON:0004016!1.75e-09!9;UBERON:0010083!1.75e-09!9;UBERON:0000475!8.47e-09!365;UBERON:0005256!3.60e-08!143;UBERON:0000479!8.66e-07!787|ontology_enrichment_uberon_v019=UBERON:0001134;9.19e-13;16!UBERON:0002036;9.19e-13;16!UBERON:0002067;2.71e-11;9!UBERON:0002097;5.06e-11;41!UBERON:0000412;2.94e-10;3!UBERON:0001992;2.94e-10;3!UBERON:0002073;2.94e-10;5!UBERON:0002199;2.74e-09;46!UBERON:0002416;2.74e-09;46!UBERON:0002204;4.29e-09;70!UBERON:0003498;5.70e-09;3!UBERON:0005985;5.70e-09;3!UBERON:0001621;5.70e-09;3!UBERON:0000948;1.21e-08;22!UBERON:0002385;1.78e-08;31!UBERON:0001015;1.78e-08;31!UBERON:0000383;1.78e-08;31!UBERON:0001758;4.56e-08;6!UBERON:0003672;4.56e-08;6!UBERON:0003102;6.00e-08;50!UBERON:0007100;2.08e-07;25!UBERON:0001434;3.82e-07;36!UBERON:0003129;6.60e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.67e-15,71;UBERON:0003059,5.67e-15,71;UBERON:0007282,5.67e-15,71;UBERON:0004290,5.67e-15,71;UBERON:0009618,5.67e-15,71;UBERON:0003077,1.11e-14,72;UBERON:0007285,1.11e-14,72;UBERON:0007524,2.12e-14,73;UBERON:0002097,1.11e-13,41;UBERON:0000486,2.82e-13,83;UBERON:0007503,4.26e-13,78;UBERON:0002199,9.11e-12,46;UBERON:0002416,9.11e-12,46;UBERON:0002067,2.11e-11,9;UBERON:0004016,2.11e-11,9;UBERON:0010083,2.11e-11,9;UBERON:0000412,2.67e-10,3;UBERON:0001992,2.67e-10,3;UBERON:0002073,2.70e-10,5;UBERON:0005086,2.70e-10,5;UBERON:0001621,7.56e-09,3;UBERON:0001134,9.18e-09,62;UBERON:0002036,9.18e-09,62;UBERON:0003082,9.18e-09,62;UBERON:0002385,2.28e-08,64;UBERON:0001015,2.28e-08,64;UBERON:0000383,2.28e-08,64;UBERON:0003102,3.36e-08,99;UBERON:0001758,5.61e-08,6;UBERON:0003672,5.61e-08,6;UBERON:0000948,8.38e-08,24;UBERON:0005498,8.38e-08,24;UBERON:0004140,8.38e-08,24;UBERON:0009881,8.38e-08,24;UBERON:0004141,8.38e-08,24;UBERON:0003084,8.38e-08,24;UBERON:0007005,8.38e-08,24;UBERON:0004139,8.38e-08,24;UBERON:0004291,8.38e-08,24;UBERON:0005256,3.40e-07,122;UBERON:0003129,7.86e-07,7;UBERON:0002204,8.15e-07,167;UBERON:0007100,9.37e-07,27|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.123121058076788,0,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.13967460498122,2.25095607382472,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0,1.5608003841516,2.2818872861778,1.49448680551801,0.469737994575059,0.809364721840658,0.842704840213491,0.204154171254893,0.368502951935304,0.516628905878827,2.37600571456411,1.97813543422845,0,2.87447256726495,1.17835279767846,0.500474079487857,0.554128230968366,2.19488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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9379 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8009 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000496291_5end | |||
|description=CAGE_peak_7_at_NRXN2_5end | |||
|id=chr11:64428841..64428860,- | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-29!180;CL:0000057!2.33e-23!75;CL:0002620!1.04e-14!23;CL:0000680!4.23e-10!57;CL:0000056!4.23e-10!57;CL:0000355!4.23e-10!57;CL:0000188!7.14e-09!9;CL:0000183!3.41e-08!59;CL:0000187!3.45e-08!54 | |||
|ontology_enrichment_celltype_v019=CL:0000680;9.62e-15;7!CL:0002620;2.59e-12;23!CL:0000056;3.62e-12;4!CL:0000188;2.17e-10;9!CL:0000346;2.94e-10;3!CL:1000428;2.94e-10;3!CL:0002559;2.94e-10;5!CL:0000515;6.48e-10;3!CL:0002592;5.70e-09;3!CL:0002556;4.56e-08;6!CL:0002494;9.16e-08;16!CL:0000569;4.66e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.37e-12,23;CL:0000515,3.97e-12,4;CL:0000057,8.99e-11,76;CL:0000188,2.22e-10,9;CL:0000346,2.67e-10,3;CL:1000428,2.67e-10,3;CL:0002559,2.70e-10,5;CL:0000680,1.22e-09,58;CL:0000056,1.22e-09,58;CL:0000355,1.22e-09,58;CL:0002592,7.56e-09,3;CL:0002556,5.61e-08,6;CL:0002494,9.95e-08,16;CL:0000569,4.73e-07,4;CL:0000011,4.73e-07,4;CL:0000048,4.90e-07,427;CL:0000723,9.06e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000515;3.62e-12;4!CL:0000011;4.66e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.57e-18!83;UBERON:0002329!1.57e-18!83;UBERON:0003077!1.57e-18!83;UBERON:0003059!1.57e-18!83;UBERON:0007282!1.57e-18!83;UBERON:0009618!1.57e-18!83;UBERON:0007285!1.57e-18!83;UBERON:0004290!5.56e-16!70;UBERON:0002199!1.10e-13!45;UBERON:0002416!1.10e-13!45;UBERON:0003102!3.34e-13!95;UBERON:0000486!4.13e-13!82;UBERON:0002097!5.70e-13!40;UBERON:0001134!2.85e-10!61;UBERON:0002036!2.85e-10!61;UBERON:0003082!2.85e-10!61;UBERON:0002385!2.86e-10!63;UBERON:0001015!2.86e-10!63;UBERON:0000383!2.86e-10!63;UBERON:0002067!1.75e-09!9;UBERON:0004016!1.75e-09!9;UBERON:0010083!1.75e-09!9;UBERON:0000475!8.47e-09!365;UBERON:0005256!3.60e-08!143;UBERON:0000479!8.66e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.19e-13;16!UBERON:0002036;9.19e-13;16!UBERON:0002067;2.71e-11;9!UBERON:0002097;5.06e-11;41!UBERON:0000412;2.94e-10;3!UBERON:0001992;2.94e-10;3!UBERON:0002073;2.94e-10;5!UBERON:0002199;2.74e-09;46!UBERON:0002416;2.74e-09;46!UBERON:0002204;4.29e-09;70!UBERON:0003498;5.70e-09;3!UBERON:0005985;5.70e-09;3!UBERON:0001621;5.70e-09;3!UBERON:0000948;1.21e-08;22!UBERON:0002385;1.78e-08;31!UBERON:0001015;1.78e-08;31!UBERON:0000383;1.78e-08;31!UBERON:0001758;4.56e-08;6!UBERON:0003672;4.56e-08;6!UBERON:0003102;6.00e-08;50!UBERON:0007100;2.08e-07;25!UBERON:0001434;3.82e-07;36!UBERON:0003129;6.60e-07;7 | |||
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| |||
|short_description=p7@NRXN2 | |||
}} |
Revision as of 18:47, 10 September 2013
Short description: | p7@NRXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NRXN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000496291_5end |
EntrezGene: | NRXN2 |
HGNC: | 8009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.37e-12 | 23 |
skeletal muscle myoblast | 3.97e-12 | 4 |
fibroblast | 8.99e-11 | 76 |
cell of skeletal muscle | 2.22e-10 | 9 |
hair follicle dermal papilla cell | 2.67e-10 | 3 |
stem cell of epidermis | 2.67e-10 | 3 |
hair follicle cell | 2.70e-10 | 5 |
muscle precursor cell | 1.22e-09 | 58 |
myoblast | 1.22e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-09 | 58 |
smooth muscle cell of the coronary artery | 7.56e-09 | 3 |
fibroblast of periodontium | 5.61e-08 | 6 |
cardiocyte | 9.95e-08 | 16 |
cardiac mesenchymal cell | 4.73e-07 | 4 |
migratory trunk neural crest cell | 4.73e-07 | 4 |
multi fate stem cell | 4.90e-07 | 427 |
somatic stem cell | 9.06e-07 | 433 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.