FFCP PHASE1:Hg19::chr15:51669607..51669617,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=342035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29514|TSSclassifier=S|UniProt=|association_with_transcript=-35bp_to_ENST00000537339_5end|description=CAGE_peak_6_at_GLDN_5end|id=chr15:51669607..51669617,+|ontology_enrichment_celltype=CL:0002622!1.43e-17!3;CL:1000487!1.29e-12!2|ontology_enrichment_celltype_v019=CL:1000487;3.44e-21;2!CL:0002622;1.31e-14;3|ontology_enrichment_celltype_v019_2=CL:1000487,3.81e-21,2;CL:0002622,1.22e-14,3|ontology_enrichment_development_v019=UBERON:0003124;1.48e-40;1!UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3!UBERON:0004872;5.70e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.40e-15!69;UBERON:0006238!1.40e-15!69;UBERON:0001049!8.54e-15!57;UBERON:0005068!8.54e-15!57;UBERON:0006241!8.54e-15!57;UBERON:0007135!8.54e-15!57;UBERON:0002616!3.31e-14!59;UBERON:0002780!5.39e-13!41;UBERON:0001890!5.39e-13!41;UBERON:0006240!5.39e-13!41;UBERON:0002367!8.55e-13!11;UBERON:0010147!8.55e-13!11;UBERON:0009846!8.55e-13!11;UBERON:0003353!8.55e-13!11;UBERON:0004902!8.55e-13!11;UBERON:0003820!8.55e-13!11;UBERON:0009847!8.55e-13!11;UBERON:0001017!1.19e-12!82;UBERON:0003080!1.20e-12!42;UBERON:0007023!1.36e-12!115;UBERON:0000073!3.90e-12!94;UBERON:0001016!3.90e-12!94;UBERON:0005162!6.17e-12!2;UBERON:0000122!6.17e-12!2;UBERON:0005743!6.31e-12!86;UBERON:0003937!1.05e-11!12;UBERON:0005399!1.05e-11!12;UBERON:0000033!2.99e-11!123;UBERON:0002298!7.30e-11!8;UBERON:0001893!1.46e-10!34;UBERON:0000153!1.49e-10!129;UBERON:0007811!1.49e-10!129;UBERON:0003075!1.86e-10!86;UBERON:0007284!1.86e-10!86;UBERON:0001046!3.25e-10!19;UBERON:0000162!5.40e-10!14;UBERON:0001353!5.40e-10!14;UBERON:0000163!5.40e-10!14;UBERON:0006866!5.40e-10!14;UBERON:0000164!5.40e-10!14;UBERON:0000931!5.40e-10!14;UBERON:0002346!7.29e-10!90;UBERON:0003056!7.30e-10!61;UBERON:0004122!2.62e-09!15;UBERON:0002791!1.18e-08!33;UBERON:0002020!2.09e-08!34;UBERON:0003528!2.09e-08!34;UBERON:0000988!4.23e-08!3;UBERON:0006331!4.89e-08!3;UBERON:0004111!1.21e-07!241;UBERON:0000941!3.52e-07!1;UBERON:0004904!3.52e-07!1;UBERON:0002464!3.52e-07!1;UBERON:0001021!3.52e-07!1;UBERON:0001785!3.52e-07!1;UBERON:0004121!4.12e-07!169;UBERON:0001154!6.60e-07!1;UBERON:0001153!6.60e-07!1;UBERON:0001869!7.01e-07!32;UBERON:0000924!7.29e-07!173;UBERON:0006601!7.29e-07!173;UBERON:0004732!7.38e-07!13;UBERON:0002581!9.79e-07!1|ontology_enrichment_uberon_v019=UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0002367;1.62e-15;11!UBERON:0010147;1.62e-15;11!UBERON:0003937;2.57e-14;12!UBERON:0005399;2.57e-14;12!UBERON:0000077;4.53e-14;27!UBERON:0001987;3.10e-11;4!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0002367,1.62e-15,11;UBERON:0010147,1.62e-15,11;UBERON:0009846,1.62e-15,11;UBERON:0003353,1.62e-15,11;UBERON:0004902,1.62e-15,11;UBERON:0003820,1.62e-15,11;UBERON:0009847,1.62e-15,11;UBERON:0003937,2.57e-14,12;UBERON:0005399,2.57e-14,12;UBERON:0000077,3.69e-13,29;UBERON:0000162,2.00e-12,14;UBERON:0001353,2.00e-12,14;UBERON:0000163,2.00e-12,14;UBERON:0006866,2.00e-12,14;UBERON:0000164,2.00e-12,14;UBERON:0000931,2.00e-12,14;UBERON:0004122,1.15e-11,15;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0001781,3.42e-11,4;UBERON:0001046,1.99e-09,19;UBERON:0006554,2.00e-08,47;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0001008,2.89e-08,48;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0003124,5.70e-07,7;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,3.4444334449382,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=342035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29514 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENST00000537339_5end | |||
|description=CAGE_peak_6_at_GLDN_5end | |||
|id=chr15:51669607..51669617,+ | |||
|ontology_enrichment_celltype=CL:0002622!1.43e-17!3;CL:1000487!1.29e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:1000487;3.44e-21;2!CL:0002622;1.31e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,3.81e-21,2;CL:0002622,1.22e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.48e-40;1!UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3!UBERON:0004872;5.70e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.40e-15!69;UBERON:0006238!1.40e-15!69;UBERON:0001049!8.54e-15!57;UBERON:0005068!8.54e-15!57;UBERON:0006241!8.54e-15!57;UBERON:0007135!8.54e-15!57;UBERON:0002616!3.31e-14!59;UBERON:0002780!5.39e-13!41;UBERON:0001890!5.39e-13!41;UBERON:0006240!5.39e-13!41;UBERON:0002367!8.55e-13!11;UBERON:0010147!8.55e-13!11;UBERON:0009846!8.55e-13!11;UBERON:0003353!8.55e-13!11;UBERON:0004902!8.55e-13!11;UBERON:0003820!8.55e-13!11;UBERON:0009847!8.55e-13!11;UBERON:0001017!1.19e-12!82;UBERON:0003080!1.20e-12!42;UBERON:0007023!1.36e-12!115;UBERON:0000073!3.90e-12!94;UBERON:0001016!3.90e-12!94;UBERON:0005162!6.17e-12!2;UBERON:0000122!6.17e-12!2;UBERON:0005743!6.31e-12!86;UBERON:0003937!1.05e-11!12;UBERON:0005399!1.05e-11!12;UBERON:0000033!2.99e-11!123;UBERON:0002298!7.30e-11!8;UBERON:0001893!1.46e-10!34;UBERON:0000153!1.49e-10!129;UBERON:0007811!1.49e-10!129;UBERON:0003075!1.86e-10!86;UBERON:0007284!1.86e-10!86;UBERON:0001046!3.25e-10!19;UBERON:0000162!5.40e-10!14;UBERON:0001353!5.40e-10!14;UBERON:0000163!5.40e-10!14;UBERON:0006866!5.40e-10!14;UBERON:0000164!5.40e-10!14;UBERON:0000931!5.40e-10!14;UBERON:0002346!7.29e-10!90;UBERON:0003056!7.30e-10!61;UBERON:0004122!2.62e-09!15;UBERON:0002791!1.18e-08!33;UBERON:0002020!2.09e-08!34;UBERON:0003528!2.09e-08!34;UBERON:0000988!4.23e-08!3;UBERON:0006331!4.89e-08!3;UBERON:0004111!1.21e-07!241;UBERON:0000941!3.52e-07!1;UBERON:0004904!3.52e-07!1;UBERON:0002464!3.52e-07!1;UBERON:0001021!3.52e-07!1;UBERON:0001785!3.52e-07!1;UBERON:0004121!4.12e-07!169;UBERON:0001154!6.60e-07!1;UBERON:0001153!6.60e-07!1;UBERON:0001869!7.01e-07!32;UBERON:0000924!7.29e-07!173;UBERON:0006601!7.29e-07!173;UBERON:0004732!7.38e-07!13;UBERON:0002581!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0002367;1.62e-15;11!UBERON:0010147;1.62e-15;11!UBERON:0003937;2.57e-14;12!UBERON:0005399;2.57e-14;12!UBERON:0000077;4.53e-14;27!UBERON:0001987;3.10e-11;4!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
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|short_description=p6@GLDN | |||
}} |
Revision as of 07:22, 11 September 2013
Short description: | p6@GLDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_GLDN_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000537339_5end |
EntrezGene: | GLDN |
HGNC: | 29514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 3.81e-21 | 2 |
prostate stromal cell | 1.22e-14 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.