FFCP PHASE1:Hg19::chr17:7095704..7095716,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1742|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2903|TSSclassifier=W|UniProt=|association_with_transcript=-150bp_to_ENST00000489885_5end|coexpression_cluster_id=C85|description=CAGE_peak_25_at_DLG4_5end|id=chr17:7095704..7095716,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;5.98e-34;3!UBERON:0005425;6.72e-26;1!UBERON:0003056;1.47e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:154;1.14e-13;2!DOID:4236;1.14e-13;2|ontology_enrichment_disease_v019_2=DOID:154,1.07e-13,2;DOID:4236,1.07e-13,2|ontology_enrichment_uberon=UBERON:0001049!1.09e-19!57;UBERON:0005068!1.09e-19!57;UBERON:0006241!1.09e-19!57;UBERON:0007135!1.09e-19!57;UBERON:0002616!8.82e-19!59;UBERON:0001893!3.88e-17!34;UBERON:0000073!1.27e-16!94;UBERON:0001016!1.27e-16!94;UBERON:0001869!1.47e-16!32;UBERON:0005743!2.63e-16!86;UBERON:0001017!2.88e-16!82;UBERON:0000955!4.72e-16!69;UBERON:0006238!4.72e-16!69;UBERON:0002791!6.32e-16!33;UBERON:0002619!1.34e-15!22;UBERON:0002020!1.95e-15!34;UBERON:0003528!1.95e-15!34;UBERON:0000956!1.97e-15!25;UBERON:0000203!1.97e-15!25;UBERON:0002346!2.49e-15!90;UBERON:0001950!5.59e-15!20;UBERON:0002780!1.96e-13!41;UBERON:0001890!1.96e-13!41;UBERON:0006240!1.96e-13!41;UBERON:0003080!5.26e-13!42;UBERON:0003075!1.01e-12!86;UBERON:0007284!1.01e-12!86;UBERON:0004732!1.59e-12!13;UBERON:0000924!2.05e-11!173;UBERON:0006601!2.05e-11!173;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0007023!1.35e-09!115;UBERON:0004121!1.41e-09!169;UBERON:0003056!1.53e-09!61;UBERON:0000033!7.80e-09!123;UBERON:0002680!7.91e-09!9;UBERON:0001895!7.91e-09!9;UBERON:0010092!7.91e-09!9;UBERON:0000153!9.39e-09!129;UBERON:0007811!9.39e-09!129;UBERON:0003076!3.38e-08!15;UBERON:0003057!3.38e-08!15;UBERON:0001872!2.34e-07!5|ontology_enrichment_uberon_v019=UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0004732;7.64e-18;13!UBERON:0002037;1.50e-17;6!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0000010;4.54e-12;8!UBERON:0002680;4.80e-12;9!UBERON:0001895;4.80e-12;9!UBERON:0004733;2.83e-09;12!UBERON:0002028;2.83e-09;12|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.79e-26,1;UBERON:0001785,9.79e-26,1;UBERON:0002464,9.79e-26,1;UBERON:0004904,9.79e-26,1;UBERON:0001021,9.79e-26,1;UBERON:0003902,9.79e-26,1;UBERON:0005425,9.79e-26,1;UBERON:0004732,8.57e-18,13;UBERON:0002037,1.57e-17,6;UBERON:0006215,1.57e-17,6;UBERON:0003714,1.37e-13,2;UBERON:0005162,1.37e-13,2;UBERON:0000122,1.37e-13,2;UBERON:0002680,4.94e-12,9;UBERON:0000010,4.94e-12,8;UBERON:0001895,4.94e-12,9;UBERON:0010092,4.94e-12,9;UBERON:0001016,8.55e-10,89;UBERON:0004733,2.89e-09,12;UBERON:0002028,2.89e-09,12;UBERON:0007277,2.89e-09,12;UBERON:0003076,1.35e-07,15;UBERON:0003057,1.35e-07,15;UBERON:0001781,1.92e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56262495439963,0,0,3.05163472634166,0.221158519862449,1.47773809476774,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0.91821828489147,0,0,0,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2903 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-150bp_to_ENST00000489885_5end | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_25_at_DLG4_5end | |||
|id=chr17:7095704..7095716,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.98e-34;3!UBERON:0005425;6.72e-26;1!UBERON:0003056;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.14e-13;2!DOID:4236;1.14e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.07e-13,2;DOID:4236,1.07e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.09e-19!57;UBERON:0005068!1.09e-19!57;UBERON:0006241!1.09e-19!57;UBERON:0007135!1.09e-19!57;UBERON:0002616!8.82e-19!59;UBERON:0001893!3.88e-17!34;UBERON:0000073!1.27e-16!94;UBERON:0001016!1.27e-16!94;UBERON:0001869!1.47e-16!32;UBERON:0005743!2.63e-16!86;UBERON:0001017!2.88e-16!82;UBERON:0000955!4.72e-16!69;UBERON:0006238!4.72e-16!69;UBERON:0002791!6.32e-16!33;UBERON:0002619!1.34e-15!22;UBERON:0002020!1.95e-15!34;UBERON:0003528!1.95e-15!34;UBERON:0000956!1.97e-15!25;UBERON:0000203!1.97e-15!25;UBERON:0002346!2.49e-15!90;UBERON:0001950!5.59e-15!20;UBERON:0002780!1.96e-13!41;UBERON:0001890!1.96e-13!41;UBERON:0006240!1.96e-13!41;UBERON:0003080!5.26e-13!42;UBERON:0003075!1.01e-12!86;UBERON:0007284!1.01e-12!86;UBERON:0004732!1.59e-12!13;UBERON:0000924!2.05e-11!173;UBERON:0006601!2.05e-11!173;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0007023!1.35e-09!115;UBERON:0004121!1.41e-09!169;UBERON:0003056!1.53e-09!61;UBERON:0000033!7.80e-09!123;UBERON:0002680!7.91e-09!9;UBERON:0001895!7.91e-09!9;UBERON:0010092!7.91e-09!9;UBERON:0000153!9.39e-09!129;UBERON:0007811!9.39e-09!129;UBERON:0003076!3.38e-08!15;UBERON:0003057!3.38e-08!15;UBERON:0001872!2.34e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0004732;7.64e-18;13!UBERON:0002037;1.50e-17;6!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0000010;4.54e-12;8!UBERON:0002680;4.80e-12;9!UBERON:0001895;4.80e-12;9!UBERON:0004733;2.83e-09;12!UBERON:0002028;2.83e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.79e-26,1;UBERON:0001785,9.79e-26,1;UBERON:0002464,9.79e-26,1;UBERON:0004904,9.79e-26,1;UBERON:0001021,9.79e-26,1;UBERON:0003902,9.79e-26,1;UBERON:0005425,9.79e-26,1;UBERON:0004732,8.57e-18,13;UBERON:0002037,1.57e-17,6;UBERON:0006215,1.57e-17,6;UBERON:0003714,1.37e-13,2;UBERON:0005162,1.37e-13,2;UBERON:0000122,1.37e-13,2;UBERON:0002680,4.94e-12,9;UBERON:0000010,4.94e-12,8;UBERON:0001895,4.94e-12,9;UBERON:0010092,4.94e-12,9;UBERON:0001016,8.55e-10,89;UBERON:0004733,2.89e-09,12;UBERON:0002028,2.89e-09,12;UBERON:0007277,2.89e-09,12;UBERON:0003076,1.35e-07,15;UBERON:0003057,1.35e-07,15;UBERON:0001781,1.92e-07,4 | |||
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|short_description=p25@DLG4 | |||
}} |
Revision as of 15:24, 11 September 2013
Short description: | p25@DLG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_DLG4_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -150bp_to_ENST00000489885_5end |
EntrezGene: | DLG4 |
HGNC: | 2903 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.79e-26 | 1 |
cranial nerve | 9.79e-26 | 1 |
nerve trunk | 9.79e-26 | 1 |
nerve connecting eye with brain | 9.79e-26 | 1 |
nerve | 9.79e-26 | 1 |
retinal neural layer | 9.79e-26 | 1 |
presumptive neural retina | 9.79e-26 | 1 |
segmental subdivision of nervous system | 8.57e-18 | 13 |
cerebellum | 1.57e-17 | 6 |
rhombic lip | 1.57e-17 | 6 |
neural tissue | 1.37e-13 | 2 |
multi cell component structure | 1.37e-13 | 2 |
neuron projection bundle | 1.37e-13 | 2 |
regional part of metencephalon | 4.94e-12 | 9 |
peripheral nervous system | 4.94e-12 | 8 |
metencephalon | 4.94e-12 | 9 |
future metencephalon | 4.94e-12 | 9 |
nervous system | 8.55e-10 | 89 |
segmental subdivision of hindbrain | 2.89e-09 | 12 |
hindbrain | 2.89e-09 | 12 |
presumptive hindbrain | 2.89e-09 | 12 |
posterior neural tube | 1.35e-07 | 15 |
chordal neural plate | 1.35e-07 | 15 |
layer of retina | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.07e-13 | 2 |
carcinosarcoma | 1.07e-13 | 2 |
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