FFCP PHASE1:Hg19::chr19:7660842..7660853,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57662|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29307|TSSclassifier=S|UniProt=Q9P1Y5|association_with_transcript=54bp_to_ENST00000160298,ENST00000446248,NM_001080429,NM_020902,uc002mgu.3,uc002mgv.3_5end|description=CAGE_peak_3_at_CAMSAP3_5end|id=chr19:7660842..7660853,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;2.97e-19;1!CL:0000164;2.97e-19;1!CL:0000502;2.97e-19;1!CL:0000172;2.97e-19;1!CL:0000173;2.97e-19;1|ontology_enrichment_celltype_v019_2=CL:0000167,2.25e-19,1;CL:0000164,2.25e-19,1;CL:0000502,2.25e-19,1;CL:0000172,2.25e-19,1;CL:0000173,2.25e-19,1;CL:0002351,2.25e-19,1|ontology_enrichment_development_v019=CL:0002351;2.97e-19;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;2.97e-19;1|ontology_enrichment_disease_v019_2=DOID:4430,2.25e-19,1|ontology_enrichment_uberon=UBERON:0001950!6.50e-21!20;UBERON:0002619!9.27e-21!22;UBERON:0001869!1.86e-19!32;UBERON:0002020!2.48e-19!34;UBERON:0003528!2.48e-19!34;UBERON:0007023!4.00e-19!115;UBERON:0001893!6.72e-18!34;UBERON:0001049!7.13e-18!57;UBERON:0005068!7.13e-18!57;UBERON:0006241!7.13e-18!57;UBERON:0007135!7.13e-18!57;UBERON:0000956!1.29e-17!25;UBERON:0000203!1.29e-17!25;UBERON:0002791!9.80e-17!33;UBERON:0002616!1.36e-15!59;UBERON:0002780!5.24e-15!41;UBERON:0001890!5.24e-15!41;UBERON:0006240!5.24e-15!41;UBERON:0000955!6.29e-15!69;UBERON:0006238!6.29e-15!69;UBERON:0003080!1.77e-14!42;UBERON:0001017!7.94e-14!82;UBERON:0000073!8.32e-14!94;UBERON:0001016!8.32e-14!94;UBERON:0005743!1.35e-13!86;UBERON:0002346!1.73e-12!90;UBERON:0000924!2.55e-12!173;UBERON:0006601!2.55e-12!173;UBERON:0000033!1.85e-11!123;UBERON:0004121!3.96e-11!169;UBERON:0003075!4.43e-11!86;UBERON:0007284!4.43e-11!86;UBERON:0003056!1.80e-10!61;UBERON:0000153!2.32e-10!129;UBERON:0007811!2.32e-10!129;UBERON:0000064!6.31e-10!219;UBERON:0000200!3.11e-09!6;UBERON:0004119!7.44e-09!169;UBERON:0000925!7.44e-09!169;UBERON:0006595!7.44e-09!169;UBERON:0001872!1.01e-08!5;UBERON:0002021!1.44e-08!5;UBERON:0000481!1.22e-07!347;UBERON:0000922!1.28e-07!612|ontology_enrichment_uberon_v019=UBERON:0002021;1.25e-57;5!UBERON:0001950;1.39e-41;20!UBERON:0002619;5.83e-38;22!UBERON:0000956;1.43e-33;25!UBERON:0000203;1.43e-33;25!UBERON:0001869;2.00e-25;32!UBERON:0002791;4.92e-24;32!UBERON:0001893;1.32e-20;34!UBERON:0003528;1.32e-20;34!UBERON:0002020;1.32e-20;34!UBERON:0002581;2.97e-19;1!UBERON:0002902;2.97e-19;1!UBERON:0009899;2.97e-19;1!UBERON:0002780;3.86e-17;41!UBERON:0001890;3.86e-17;41!UBERON:0002108;1.68e-15;4!UBERON:0001872;2.51e-15;5!UBERON:0000200;4.39e-13;6!UBERON:0002702;1.57e-10;2!UBERON:0000073;1.49e-09;53!UBERON:0002616;1.49e-09;53!UBERON:0000955;1.42e-07;68!UBERON:0001870;1.93e-07;3!UBERON:0002114;1.93e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.48e-58,5;UBERON:0001950,1.00e-41,20;UBERON:0002619,4.30e-38,22;UBERON:0000956,1.09e-33,25;UBERON:0000203,1.09e-33,25;UBERON:0002791,1.63e-26,32;UBERON:0001869,1.63e-26,32;UBERON:0003528,5.44e-25,34;UBERON:0002020,5.44e-25,34;UBERON:0001893,5.44e-25,34;UBERON:0002780,8.54e-21,41;UBERON:0001890,8.54e-21,41;UBERON:0003080,8.54e-21,41;UBERON:0006240,8.54e-21,41;UBERON:0002902,3.25e-19,1;UBERON:0009899,3.25e-19,1;UBERON:0002581,3.91e-19,1;UBERON:0000073,4.02e-16,53;UBERON:0002616,4.02e-16,53;UBERON:0001872,2.17e-15,5;UBERON:0002108,2.34e-15,4;UBERON:0001049,2.93e-15,56;UBERON:0005068,2.93e-15,56;UBERON:0006241,2.93e-15,56;UBERON:0007135,2.93e-15,56;UBERON:0003056,5.25e-14,61;UBERON:0000200,4.81e-13,6;UBERON:0000955,2.27e-12,68;UBERON:0006238,2.27e-12,68;UBERON:0002702,1.57e-10,2;UBERON:0001017,2.22e-10,81;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0002346,6.91e-10,86;UBERON:0001016,2.50e-09,89;UBERON:0010371,3.99e-08,104;UBERON:0001870,1.93e-07,3;UBERON:0002114,2.05e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29307 | |||
|TSSclassifier=S | |||
|UniProt=Q9P1Y5 | |||
|association_with_transcript=54bp_to_ENST00000160298,ENST00000446248,NM_001080429,NM_020902,uc002mgu.3,uc002mgv.3_5end | |||
|description=CAGE_peak_3_at_CAMSAP3_5end | |||
|id=chr19:7660842..7660853,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.97e-19;1!CL:0000164;2.97e-19;1!CL:0000502;2.97e-19;1!CL:0000172;2.97e-19;1!CL:0000173;2.97e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.25e-19,1;CL:0000164,2.25e-19,1;CL:0000502,2.25e-19,1;CL:0000172,2.25e-19,1;CL:0000173,2.25e-19,1;CL:0002351,2.25e-19,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.97e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.97e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.25e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0001950!6.50e-21!20;UBERON:0002619!9.27e-21!22;UBERON:0001869!1.86e-19!32;UBERON:0002020!2.48e-19!34;UBERON:0003528!2.48e-19!34;UBERON:0007023!4.00e-19!115;UBERON:0001893!6.72e-18!34;UBERON:0001049!7.13e-18!57;UBERON:0005068!7.13e-18!57;UBERON:0006241!7.13e-18!57;UBERON:0007135!7.13e-18!57;UBERON:0000956!1.29e-17!25;UBERON:0000203!1.29e-17!25;UBERON:0002791!9.80e-17!33;UBERON:0002616!1.36e-15!59;UBERON:0002780!5.24e-15!41;UBERON:0001890!5.24e-15!41;UBERON:0006240!5.24e-15!41;UBERON:0000955!6.29e-15!69;UBERON:0006238!6.29e-15!69;UBERON:0003080!1.77e-14!42;UBERON:0001017!7.94e-14!82;UBERON:0000073!8.32e-14!94;UBERON:0001016!8.32e-14!94;UBERON:0005743!1.35e-13!86;UBERON:0002346!1.73e-12!90;UBERON:0000924!2.55e-12!173;UBERON:0006601!2.55e-12!173;UBERON:0000033!1.85e-11!123;UBERON:0004121!3.96e-11!169;UBERON:0003075!4.43e-11!86;UBERON:0007284!4.43e-11!86;UBERON:0003056!1.80e-10!61;UBERON:0000153!2.32e-10!129;UBERON:0007811!2.32e-10!129;UBERON:0000064!6.31e-10!219;UBERON:0000200!3.11e-09!6;UBERON:0004119!7.44e-09!169;UBERON:0000925!7.44e-09!169;UBERON:0006595!7.44e-09!169;UBERON:0001872!1.01e-08!5;UBERON:0002021!1.44e-08!5;UBERON:0000481!1.22e-07!347;UBERON:0000922!1.28e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.25e-57;5!UBERON:0001950;1.39e-41;20!UBERON:0002619;5.83e-38;22!UBERON:0000956;1.43e-33;25!UBERON:0000203;1.43e-33;25!UBERON:0001869;2.00e-25;32!UBERON:0002791;4.92e-24;32!UBERON:0001893;1.32e-20;34!UBERON:0003528;1.32e-20;34!UBERON:0002020;1.32e-20;34!UBERON:0002581;2.97e-19;1!UBERON:0002902;2.97e-19;1!UBERON:0009899;2.97e-19;1!UBERON:0002780;3.86e-17;41!UBERON:0001890;3.86e-17;41!UBERON:0002108;1.68e-15;4!UBERON:0001872;2.51e-15;5!UBERON:0000200;4.39e-13;6!UBERON:0002702;1.57e-10;2!UBERON:0000073;1.49e-09;53!UBERON:0002616;1.49e-09;53!UBERON:0000955;1.42e-07;68!UBERON:0001870;1.93e-07;3!UBERON:0002114;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.48e-58,5;UBERON:0001950,1.00e-41,20;UBERON:0002619,4.30e-38,22;UBERON:0000956,1.09e-33,25;UBERON:0000203,1.09e-33,25;UBERON:0002791,1.63e-26,32;UBERON:0001869,1.63e-26,32;UBERON:0003528,5.44e-25,34;UBERON:0002020,5.44e-25,34;UBERON:0001893,5.44e-25,34;UBERON:0002780,8.54e-21,41;UBERON:0001890,8.54e-21,41;UBERON:0003080,8.54e-21,41;UBERON:0006240,8.54e-21,41;UBERON:0002902,3.25e-19,1;UBERON:0009899,3.25e-19,1;UBERON:0002581,3.91e-19,1;UBERON:0000073,4.02e-16,53;UBERON:0002616,4.02e-16,53;UBERON:0001872,2.17e-15,5;UBERON:0002108,2.34e-15,4;UBERON:0001049,2.93e-15,56;UBERON:0005068,2.93e-15,56;UBERON:0006241,2.93e-15,56;UBERON:0007135,2.93e-15,56;UBERON:0003056,5.25e-14,61;UBERON:0000200,4.81e-13,6;UBERON:0000955,2.27e-12,68;UBERON:0006238,2.27e-12,68;UBERON:0002702,1.57e-10,2;UBERON:0001017,2.22e-10,81;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0002346,6.91e-10,86;UBERON:0001016,2.50e-09,89;UBERON:0010371,3.99e-08,104;UBERON:0001870,1.93e-07,3;UBERON:0002114,2.05e-07,2 | |||
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|short_description=p3@CAMSAP3 | |||
}} |
Revision as of 22:55, 11 September 2013
Short description: | p3@CAMSAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CAMSAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_ENST00000160298, ENST00000446248, NM_001080429, NM_020902, uc002mgu.3, uc002mgv.3_5end |
EntrezGene: | CAMSAP3 |
HGNC: | 29307 |
UniProt: | Q9P1Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.25e-19 | 1 |
enteroendocrine cell | 2.25e-19 | 1 |
type D enteroendocrine cell | 2.25e-19 | 1 |
somatostatin secreting cell | 2.25e-19 | 1 |
pancreatic D cell | 2.25e-19 | 1 |
progenitor cell of endocrine pancreas | 2.25e-19 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.25e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.