FFCP PHASE1:Hg19::chr1:114302066..114302080,-: Difference between revisions
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{{FFCP | 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430227358820278,1.41998400876678,2.04512171421978,0,0.4582137370881,1.24082554265728,0.955538938977433,0,0.883352102537187,0.243835849964539,0.647428837187895,0.821302454849976,0,0.485710993059139,1.63757624423474,0.596852325484105,0.356760272332706,0,0.549702583727146,0.452888530700021,0.0771741581079447,0.218559560503957,1.41095188908457,0,0,1.57046773691956,0.297046400327086,0.8453114551668,2.0391253762538,0.657887425858975,0.45120521581504,0.299823467774787,0.178553938605658,1.41157948686277,0.641930933513346,0,0,0.143339583151451,0.473314686579554,0.203974470572744,0,0,1.11598505450025,1.38652688589425,0.432626562123789,1.13549782351571,2.62237372712869,2.15387451719443,0.917899467677836,0.26721740526556,0.275684698604535,1.0028301571695,0.757786982182394,0.535928260312357,0,0.413731983447581,0.426467963801962,0,0.0645889098360061,0,1.56984607612859,0.12729431655633,0.606351566874658,0.435433495793923,0,0.336760265072938,0.78894425931944,0.332660356546013,1.62806537221949,2.34800160930974,3.8614456457388,0.988077223172456,0,0.244482888365733,0,1.33151354837103,0.402547587182052,0.320568492303233|short_description=p2@PHTF1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8939 | |||
|TSSclassifier=S | |||
|UniProt=Q5TCQ3 | |||
|association_with_transcript=-7bp_to_ENST00000369600_5end | |||
|description=CAGE_peak_2_at_PHTF1_5end | |||
|id=chr1:114302066..114302080,- | |||
|ontology_enrichment_celltype=CL:0000012!1.81e-17!682;CL:0000144!2.81e-16!625;CL:0000548!4.68e-16!679;CL:0000004!4.68e-16!679;CL:0000255!4.68e-16!679;CL:0000860!2.06e-14!45;CL:0002371!1.24e-13!591;CL:0002057!5.76e-13!42;CL:0000003!1.26e-12!722;CL:0000766!4.54e-12!76;CL:0002009!5.29e-12!65;CL:0000763!1.33e-11!112;CL:0000049!1.33e-11!112;CL:0000557!2.36e-11!71;CL:0002194!4.58e-11!63;CL:0000576!4.58e-11!63;CL:0000040!4.58e-11!63;CL:0000559!4.58e-11!63;CL:0000034!1.17e-10!444;CL:0000048!1.29e-10!430;CL:0000839!1.63e-10!70;CL:0000723!1.24e-09!436;CL:0000222!4.07e-09!119;CL:0000063!1.73e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.33e-20;33!CL:0002057;7.33e-20;33!CL:0000473;1.71e-13;39!CL:0000234;1.71e-13;39!CL:0000576;1.32e-09;48!CL:0000766;4.73e-08;69!CL:0002139;3.87e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.35e-17,42;CL:0002057,6.35e-17,42;CL:0000473,4.11e-14,48;CL:0000234,4.11e-14,48;CL:0002009,7.30e-13,61;CL:0000766,1.71e-12,72;CL:0000034,5.24e-12,441;CL:0000557,5.80e-12,67;CL:0000048,6.06e-12,427;CL:0002194,1.01e-11,59;CL:0000576,1.01e-11,59;CL:0000040,1.01e-11,59;CL:0000559,1.01e-11,59;CL:0000763,2.18e-11,108;CL:0000049,2.18e-11,108;CL:0000723,5.16e-11,433;CL:0000839,1.76e-10,66;CL:0000222,3.62e-09,121;CL:0002139,3.84e-07,24;CL:0000213,7.41e-07,58;CL:0000215,7.41e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.99e-14!216;UBERON:0002371!1.32e-10!80;UBERON:0002204!2.74e-10!167;UBERON:0001474!3.94e-10!86;UBERON:0004872!9.89e-09!84;UBERON:0004535!1.60e-08!110;UBERON:0000055!2.43e-08!69;UBERON:0002049!2.87e-08!79;UBERON:0007798!2.87e-08!79;UBERON:0004765!2.99e-08!101;UBERON:0001434!2.99e-08!101;UBERON:0002390!4.44e-08!102;UBERON:0003061!4.44e-08!102;UBERON:0001981!5.50e-08!60;UBERON:0007500!5.50e-08!60;UBERON:0004537!5.50e-08!60;UBERON:0006965!5.50e-08!60;UBERON:0002193!6.38e-08!112;UBERON:0001009!7.89e-08!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.68e-15,203;UBERON:0000926,3.39e-12,315;UBERON:0004120,3.39e-12,315;UBERON:0006603,3.39e-12,315;UBERON:0002371,5.26e-11,76;UBERON:0001474,2.48e-10,82;UBERON:0002405,2.26e-09,93;UBERON:0000055,3.78e-09,68;UBERON:0002204,4.84e-09,167;UBERON:0004535,7.15e-09,109;UBERON:0002049,1.12e-08,78;UBERON:0007798,1.12e-08,78;UBERON:0004872,1.25e-08,83;UBERON:0007500,1.74e-08,59;UBERON:0001981,1.74e-08,59;UBERON:0004537,1.74e-08,59;UBERON:0006965,1.74e-08,59;UBERON:0002390,2.69e-08,98;UBERON:0003061,2.69e-08,98;UBERON:0004765,2.73e-08,90;UBERON:0002193,3.39e-08,108;UBERON:0001009,3.99e-08,112;UBERON:0000487,1.20e-07,22;UBERON:0003914,2.29e-07,117;UBERON:0001434,3.44e-07,100;UBERON:0001637,3.97e-07,42;UBERON:0003509,3.97e-07,42;UBERON:0004572,3.97e-07,42;UBERON:0006914,6.40e-07,25 | |||
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| |||
|short_description=p2@PHTF1 | |||
}} |
Revision as of 23:37, 11 September 2013
Short description: | p2@PHTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PHTF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000369600_5end |
EntrezGene: | PHTF1 |
HGNC: | 8939 |
UniProt: | Q5TCQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.35e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.35e-17 | 42 |
defensive cell | 4.11e-14 | 48 |
phagocyte | 4.11e-14 | 48 |
macrophage dendritic cell progenitor | 7.30e-13 | 61 |
myeloid leukocyte | 1.71e-12 | 72 |
stem cell | 5.24e-12 | 441 |
granulocyte monocyte progenitor cell | 5.80e-12 | 67 |
multi fate stem cell | 6.06e-12 | 427 |
monopoietic cell | 1.01e-11 | 59 |
monocyte | 1.01e-11 | 59 |
monoblast | 1.01e-11 | 59 |
promonocyte | 1.01e-11 | 59 |
myeloid cell | 2.18e-11 | 108 |
common myeloid progenitor | 2.18e-11 | 108 |
somatic stem cell | 5.16e-11 | 433 |
myeloid lineage restricted progenitor cell | 1.76e-10 | 66 |
mesodermal cell | 3.62e-09 | 121 |
endothelial cell of vascular tree | 3.84e-07 | 24 |
lining cell | 7.41e-07 | 58 |
barrier cell | 7.41e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.68e-15 | 203 |
mesoderm | 3.39e-12 | 315 |
mesoderm-derived structure | 3.39e-12 | 315 |
presumptive mesoderm | 3.39e-12 | 315 |
bone marrow | 5.26e-11 | 76 |
bone element | 2.48e-10 | 82 |
immune system | 2.26e-09 | 93 |
vessel | 3.78e-09 | 68 |
musculoskeletal system | 4.84e-09 | 167 |
cardiovascular system | 7.15e-09 | 109 |
vasculature | 1.12e-08 | 78 |
vascular system | 1.12e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 1.25e-08 | 83 |
epithelial tube open at both ends | 1.74e-08 | 59 |
blood vessel | 1.74e-08 | 59 |
blood vasculature | 1.74e-08 | 59 |
vascular cord | 1.74e-08 | 59 |
hematopoietic system | 2.69e-08 | 98 |
blood island | 2.69e-08 | 98 |
skeletal element | 2.73e-08 | 90 |
hemolymphoid system | 3.39e-08 | 108 |
circulatory system | 3.99e-08 | 112 |
simple squamous epithelium | 1.20e-07 | 22 |
epithelial tube | 2.29e-07 | 117 |
skeletal system | 3.44e-07 | 100 |
artery | 3.97e-07 | 42 |
arterial blood vessel | 3.97e-07 | 42 |
arterial system | 3.97e-07 | 42 |
squamous epithelium | 6.40e-07 | 25 |
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