FFCP PHASE1:Hg19::chr1:115053955..115053993,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1739|description=CAGE_peak_at_chr1:115053955..115053993,+|id=chr1:115053955..115053993,+|ontology_enrichment_celltype=CL:0000037!1.09e-37!172;CL:0000566!1.09e-37!172;CL:0000738!1.53e-37!140;CL:0000988!1.18e-35!182;CL:0002032!9.94e-35!165;CL:0000837!9.94e-35!165;CL:0002031!9.64e-30!124;CL:0002087!3.79e-27!119;CL:0000763!6.98e-21!112;CL:0000049!6.98e-21!112;CL:0000766!4.85e-19!76;CL:0000860!1.47e-17!45;CL:0002057!4.09e-17!42;CL:0000557!4.43e-17!71;CL:0000839!6.70e-16!70;CL:0002009!4.63e-14!65;CL:0002194!6.00e-13!63;CL:0000576!6.00e-13!63;CL:0000040!6.00e-13!63;CL:0000559!6.00e-13!63;CL:0000542!8.67e-13!53;CL:0000051!8.67e-13!53;CL:0000838!1.71e-12!52;CL:0002393!1.71e-08!9;CL:0002397!1.71e-08!9;CL:0000791!1.86e-08!18;CL:0000789!1.86e-08!18;CL:0002420!1.86e-08!18;CL:0002419!1.86e-08!18;CL:0000790!1.86e-08!18;CL:0000084!5.27e-08!25;CL:0000827!5.27e-08!25|ontology_enrichment_celltype_v019=CL:0000791;3.54e-20;18!CL:0000789;3.54e-20;18!CL:0002419;3.54e-20;18!CL:0002393;1.59e-14;6!CL:0002397;1.59e-14;6!CL:0000084;1.82e-13;25!CL:0000766;1.95e-13;69!CL:0000624;5.40e-13;6!CL:0000094;7.04e-13;8!CL:0002087;3.13e-11;104!CL:0000625;5.18e-11;11!CL:0000576;6.31e-11;48!CL:0000542;4.63e-10;53!CL:0000081;5.14e-09;11!CL:0000860;1.48e-08;33!CL:0002057;1.48e-08;33!CL:0000738;2.26e-08;136!CL:0000623;7.20e-08;3!CL:0000898;2.98e-07;3!CL:0000236;3.86e-07;13!CL:0000875;4.18e-07;3!CL:0002396;4.18e-07;3!CL:0000988;4.70e-07;177!CL:0000767;6.20e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,1.80e-49,136;CL:0000037,5.32e-41,168;CL:0000988,5.66e-38,177;CL:0002032,2.15e-37,161;CL:0000837,2.15e-37,161;CL:0002031,9.47e-37,120;CL:0002087,2.59e-33,115;CL:0000766,1.07e-25,72;CL:0000860,1.30e-21,42;CL:0002057,1.30e-21,42;CL:0000557,7.43e-21,67;CL:0000791,3.87e-20,18;CL:0000789,3.87e-20,18;CL:0002420,3.87e-20,18;CL:0002419,3.87e-20,18;CL:0000790,3.87e-20,18;CL:0002393,6.72e-20,9;CL:0002397,6.72e-20,9;CL:0000763,1.13e-19,108;CL:0000049,1.13e-19,108;CL:0000473,4.76e-18,48;CL:0000234,4.76e-18,48;CL:0000838,2.15e-17,52;CL:0000542,6.22e-17,53;CL:0000051,6.22e-17,53;CL:0002009,9.86e-17,61;CL:0000839,1.42e-16,66;CL:0002194,1.66e-14,59;CL:0000576,1.66e-14,59;CL:0000040,1.66e-14,59;CL:0000559,1.66e-14,59;CL:0000084,1.93e-13,25;CL:0000827,1.93e-13,25;CL:0000624,4.07e-13,6;CL:0000094,4.20e-13,8;CL:0000134,3.12e-11,354;CL:0000625,6.79e-11,11;CL:0002320,1.10e-10,361;CL:0000219,2.82e-09,386;CL:0000081,3.59e-09,11;CL:0000623,6.48e-08,3;CL:0000825,6.48e-08,3;CL:0000898,3.16e-07,3;CL:0000875,4.07e-07,3;CL:0002396,4.07e-07,3;CL:0000767,4.16e-07,3;CL:0000034,4.39e-07,441|ontology_enrichment_development_v019=CL:0000790;3.54e-20;18!CL:0002057;6.34e-16;42!CL:0000051;4.63e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.93e-21!102;UBERON:0003061!6.93e-21!102;UBERON:0002193!7.15e-19!112;UBERON:0002371!2.63e-16!80;UBERON:0001474!6.31e-15!86;UBERON:0002405!7.42e-11!115;UBERON:0004765!2.06e-09!101;UBERON:0001434!2.06e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.46e-20,76;UBERON:0002390,2.07e-19,98;UBERON:0003061,2.07e-19,98;UBERON:0001474,7.28e-18,82;UBERON:0002193,1.17e-16,108;UBERON:0002405,6.48e-16,93;UBERON:0004765,1.75e-15,90;UBERON:0001434,4.60e-13,100;UBERON:0002384,1.80e-10,371|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.246301768349837,0.314843125254717,4.72037132218685,1.91914699048606,2.32224184974114,0,0,0,0.232401601740905,0.142169232487422,1.17440175733939,8.86392653651004,5.41470008169383,11.2845652772243,0,0.647787332037959,0,0.726991193897824,1.88937971844405,0,1.39457422143411,0,1.85823822537062,0.575384784644301,0.768482119587302,0.236482229888585,1.72372840368309,0,1.35426486594342,0.188242339542605,1.09162460023138,1.34834090667051,0.612167784741805,1.28371610830437,0.639337125799041,0,0.797854630486527,0.426224750532694,0.870627715885752,1.13477044938228,0,0.502497330513487,0.521482918420201,0.65156653411535,1.81619850790011,1.10483290796269,1.26584954976354,5.0701268714866,5.74031609905618,7.54771123830153,2.2465726229299,3.30389164251314,1.44653028027372,2.56511469367124,2.38700012638908,3.10529061399878,0,0,3.55803701545422,2.13365111283254,0.400395987036012,1.72425731986345,1.32208974556972,0,6.83055562931338,5.87237189370939,2.6759125968766,1.32171328579026,1.12101712596307,0.790152254325231,3.93419540227666,3.53709686474248,3.90642848099067,1.33749196312542,3.58514493296949,2.36723902867367,1.94826728407911,2.22820913770347,2.3568472597987,1.10766947291811,2.16643091012012,0.512365278902701,1.95089021339817,0.822189523018381,1.93445012450094,1.15921234294021,3.41059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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1739 | |||
|description=CAGE_peak_at_chr1:115053955..115053993,+ | |||
|id=chr1:115053955..115053993,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.09e-37!172;CL:0000566!1.09e-37!172;CL:0000738!1.53e-37!140;CL:0000988!1.18e-35!182;CL:0002032!9.94e-35!165;CL:0000837!9.94e-35!165;CL:0002031!9.64e-30!124;CL:0002087!3.79e-27!119;CL:0000763!6.98e-21!112;CL:0000049!6.98e-21!112;CL:0000766!4.85e-19!76;CL:0000860!1.47e-17!45;CL:0002057!4.09e-17!42;CL:0000557!4.43e-17!71;CL:0000839!6.70e-16!70;CL:0002009!4.63e-14!65;CL:0002194!6.00e-13!63;CL:0000576!6.00e-13!63;CL:0000040!6.00e-13!63;CL:0000559!6.00e-13!63;CL:0000542!8.67e-13!53;CL:0000051!8.67e-13!53;CL:0000838!1.71e-12!52;CL:0002393!1.71e-08!9;CL:0002397!1.71e-08!9;CL:0000791!1.86e-08!18;CL:0000789!1.86e-08!18;CL:0002420!1.86e-08!18;CL:0002419!1.86e-08!18;CL:0000790!1.86e-08!18;CL:0000084!5.27e-08!25;CL:0000827!5.27e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.54e-20;18!CL:0000789;3.54e-20;18!CL:0002419;3.54e-20;18!CL:0002393;1.59e-14;6!CL:0002397;1.59e-14;6!CL:0000084;1.82e-13;25!CL:0000766;1.95e-13;69!CL:0000624;5.40e-13;6!CL:0000094;7.04e-13;8!CL:0002087;3.13e-11;104!CL:0000625;5.18e-11;11!CL:0000576;6.31e-11;48!CL:0000542;4.63e-10;53!CL:0000081;5.14e-09;11!CL:0000860;1.48e-08;33!CL:0002057;1.48e-08;33!CL:0000738;2.26e-08;136!CL:0000623;7.20e-08;3!CL:0000898;2.98e-07;3!CL:0000236;3.86e-07;13!CL:0000875;4.18e-07;3!CL:0002396;4.18e-07;3!CL:0000988;4.70e-07;177!CL:0000767;6.20e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.80e-49,136;CL:0000037,5.32e-41,168;CL:0000988,5.66e-38,177;CL:0002032,2.15e-37,161;CL:0000837,2.15e-37,161;CL:0002031,9.47e-37,120;CL:0002087,2.59e-33,115;CL:0000766,1.07e-25,72;CL:0000860,1.30e-21,42;CL:0002057,1.30e-21,42;CL:0000557,7.43e-21,67;CL:0000791,3.87e-20,18;CL:0000789,3.87e-20,18;CL:0002420,3.87e-20,18;CL:0002419,3.87e-20,18;CL:0000790,3.87e-20,18;CL:0002393,6.72e-20,9;CL:0002397,6.72e-20,9;CL:0000763,1.13e-19,108;CL:0000049,1.13e-19,108;CL:0000473,4.76e-18,48;CL:0000234,4.76e-18,48;CL:0000838,2.15e-17,52;CL:0000542,6.22e-17,53;CL:0000051,6.22e-17,53;CL:0002009,9.86e-17,61;CL:0000839,1.42e-16,66;CL:0002194,1.66e-14,59;CL:0000576,1.66e-14,59;CL:0000040,1.66e-14,59;CL:0000559,1.66e-14,59;CL:0000084,1.93e-13,25;CL:0000827,1.93e-13,25;CL:0000624,4.07e-13,6;CL:0000094,4.20e-13,8;CL:0000134,3.12e-11,354;CL:0000625,6.79e-11,11;CL:0002320,1.10e-10,361;CL:0000219,2.82e-09,386;CL:0000081,3.59e-09,11;CL:0000623,6.48e-08,3;CL:0000825,6.48e-08,3;CL:0000898,3.16e-07,3;CL:0000875,4.07e-07,3;CL:0002396,4.07e-07,3;CL:0000767,4.16e-07,3;CL:0000034,4.39e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;3.54e-20;18!CL:0002057;6.34e-16;42!CL:0000051;4.63e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.93e-21!102;UBERON:0003061!6.93e-21!102;UBERON:0002193!7.15e-19!112;UBERON:0002371!2.63e-16!80;UBERON:0001474!6.31e-15!86;UBERON:0002405!7.42e-11!115;UBERON:0004765!2.06e-09!101;UBERON:0001434!2.06e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.46e-20,76;UBERON:0002390,2.07e-19,98;UBERON:0003061,2.07e-19,98;UBERON:0001474,7.28e-18,82;UBERON:0002193,1.17e-16,108;UBERON:0002405,6.48e-16,93;UBERON:0004765,1.75e-15,90;UBERON:0001434,4.60e-13,100;UBERON:0002384,1.80e-10,371 | |||
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| |||
|short_description=p@chr1:115053955..115053993,+ | |||
}} |
Revision as of 23:39, 11 September 2013
Short description: | p@chr1:115053955..115053993, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:115053955..115053993, + |
Coexpression cluster: | C1739_CD14_Mast_Natural_Eosinophils_immature_Melanocyte_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.46e-20 | 76 |
hematopoietic system | 2.07e-19 | 98 |
blood island | 2.07e-19 | 98 |
bone element | 7.28e-18 | 82 |
hemolymphoid system | 1.17e-16 | 108 |
immune system | 6.48e-16 | 93 |
skeletal element | 1.75e-15 | 90 |
skeletal system | 4.60e-13 | 100 |
connective tissue | 1.80e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.