FFCP PHASE1:Hg19::chr1:242613002..242613023,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=200150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26879 | |||
|TSSclassifier=N | |||
|UniProt=Q8N7P1 | |||
|association_with_transcript=-218bp_to_ENST00000427495,NM_001195811,NM_001195812_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_11_at_PLD5_5end | |||
|id=chr1:242613002..242613023,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.25e-38!57;UBERON:0005068!2.25e-38!57;UBERON:0006241!2.25e-38!57;UBERON:0007135!2.25e-38!57;UBERON:0002616!5.33e-37!59;UBERON:0003075!5.20e-35!86;UBERON:0007284!5.20e-35!86;UBERON:0005743!1.41e-34!86;UBERON:0000073!1.92e-34!94;UBERON:0001016!1.92e-34!94;UBERON:0002346!2.49e-33!90;UBERON:0000955!7.95e-31!69;UBERON:0006238!7.95e-31!69;UBERON:0001017!6.10e-29!82;UBERON:0004733!2.35e-25!12;UBERON:0002028!2.35e-25!12;UBERON:0007277!2.35e-25!12;UBERON:0004732!2.24e-23!13;UBERON:0007023!6.44e-23!115;UBERON:0002791!2.38e-22!33;UBERON:0002780!1.09e-21!41;UBERON:0001890!1.09e-21!41;UBERON:0006240!1.09e-21!41;UBERON:0001893!1.14e-21!34;UBERON:0003080!3.82e-21!42;UBERON:0000033!7.15e-21!123;UBERON:0003076!3.32e-20!15;UBERON:0003057!3.32e-20!15;UBERON:0003056!3.67e-20!61;UBERON:0000153!9.06e-20!129;UBERON:0007811!9.06e-20!129;UBERON:0001869!1.20e-18!32;UBERON:0004121!5.86e-18!169;UBERON:0002020!1.64e-17!34;UBERON:0003528!1.64e-17!34;UBERON:0000924!1.80e-17!173;UBERON:0006601!1.80e-17!173;UBERON:0002619!1.16e-16!22;UBERON:0002680!1.47e-15!9;UBERON:0001895!1.47e-15!9;UBERON:0010092!1.47e-15!9;UBERON:0000956!1.17e-14!25;UBERON:0000203!1.17e-14!25;UBERON:0002037!1.04e-13!6;UBERON:0006215!1.04e-13!6;UBERON:0001950!1.71e-13!20;UBERON:0001896!1.92e-12!3;UBERON:0005290!1.92e-12!3;UBERON:0010096!1.92e-12!3;UBERON:0002298!3.98e-10!8;UBERON:0002336!1.36e-09!1;UBERON:0001018!1.36e-09!1;UBERON:0002473!1.36e-09!1;UBERON:0005340!1.36e-09!1;UBERON:0002316!1.36e-09!1;UBERON:0003544!1.36e-09!1;UBERON:0001020!1.36e-09!1;UBERON:0005970!1.36e-09!1;UBERON:0002437!1.36e-09!1;UBERON:0002581!1.48e-09!1;UBERON:0002022!1.76e-09!1;UBERON:0002902!2.26e-09!1;UBERON:0009899!2.26e-09!1;UBERON:0000025!2.46e-09!194;UBERON:0001882!2.46e-09!1;UBERON:0005403!2.46e-09!1;UBERON:0000369!5.41e-09!4;UBERON:0002435!5.41e-09!4;UBERON:0000204!5.41e-09!4;UBERON:0010082!5.41e-09!4;UBERON:0000064!5.68e-08!219;UBERON:0000966!7.71e-08!5;UBERON:0005388!7.71e-08!5;UBERON:0001802!7.71e-08!5;UBERON:0000349!1.61e-07!5;UBERON:0002021!1.83e-07!5;UBERON:0000483!2.21e-07!309;UBERON:0000119!2.82e-07!312;UBERON:0004111!6.19e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.23e-09;53!UBERON:0002616;8.23e-09;53!UBERON:0001016;9.29e-08;83!UBERON:0000955;1.67e-07;68!UBERON:0001017;8.51e-07;75 | |||
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|short_description=p11@PLD5 | |||
}} |
Revision as of 04:36, 12 September 2013
Short description: | p11@PLD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PLD5_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -218bp_to_ENST00000427495, NM_001195811, NM_001195812_5end |
EntrezGene: | PLD5 |
HGNC: | 26879 |
UniProt: | Q8N7P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.