FFCP PHASE1:Hg19::chr20:825327..825342,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83541|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16188|TSSclassifier=S|UniProt=Q9BQ89|association_with_transcript=42bp_to_ENST00000541082,NM_031424,uc002weh.1_5end|coexpression_cluster_id=C92|description=CAGE_peak_4_at_FAM110A_5end|id=chr20:825327..825342,+|ontology_enrichment_celltype=CL:0000738!9.43e-20!140;CL:0002057!4.37e-18!42;CL:0000037!8.13e-18!172;CL:0000566!8.13e-18!172;CL:0000988!2.49e-17!182;CL:0002032!7.76e-17!165;CL:0000837!7.76e-17!165;CL:0000860!1.29e-16!45;CL:0002031!1.83e-16!124;CL:0000766!2.77e-16!76;CL:0002087!9.29e-16!119;CL:0000839!8.76e-13!70;CL:0000763!1.06e-12!112;CL:0000049!1.06e-12!112;CL:0000557!1.25e-12!71;CL:0002009!9.23e-12!65;CL:0002194!3.24e-11!63;CL:0000576!3.24e-11!63;CL:0000040!3.24e-11!63;CL:0000559!3.24e-11!63;CL:0000084!7.50e-08!25;CL:0000827!7.50e-08!25;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18|ontology_enrichment_celltype_v019=CL:0000860;1.54e-13;33!CL:0002057;1.54e-13;33!CL:0000576;4.89e-12;48!CL:0000766;5.65e-12;69!CL:0000473;2.68e-10;39!CL:0000234;2.68e-10;39!CL:0000791;4.47e-10;18!CL:0000789;4.47e-10;18!CL:0002419;4.47e-10;18!CL:0000084;4.63e-09;25!CL:0000625;3.94e-08;11!CL:0000094;4.92e-08;8!CL:0000763;7.62e-08;100!CL:0002087;1.16e-07;104|ontology_enrichment_celltype_v019_2=CL:0000738,4.12e-28,136;CL:0000037,2.01e-27,168;CL:0000988,6.40e-26,177;CL:0002032,3.10e-25,161;CL:0000837,3.10e-25,161;CL:0000766,2.18e-23,72;CL:0002031,1.25e-22,120;CL:0000860,3.39e-22,42;CL:0002057,3.39e-22,42;CL:0002087,2.12e-21,115;CL:0000473,5.02e-20,48;CL:0000234,5.02e-20,48;CL:0000763,1.34e-19,108;CL:0000049,1.34e-19,108;CL:0000839,1.22e-17,66;CL:0000557,2.23e-17,67;CL:0002009,2.80e-15,61;CL:0002194,4.09e-15,59;CL:0000576,4.09e-15,59;CL:0000040,4.09e-15,59;CL:0000559,4.09e-15,59;CL:0000791,1.84e-10,18;CL:0000789,1.84e-10,18;CL:0002420,1.84e-10,18;CL:0002419,1.84e-10,18;CL:0000790,1.84e-10,18;CL:0000084,2.97e-09,25;CL:0000827,2.97e-09,25;CL:0002393,5.19e-09,9;CL:0002397,5.19e-09,9;CL:0000625,1.39e-08,11;CL:0000094,4.14e-08,8|ontology_enrichment_development_v019=CL:0002057;2.23e-16;42!CL:0000790;4.47e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.54e-18!102;UBERON:0003061!5.54e-18!102;UBERON:0002193!8.66e-16!112;UBERON:0002371!8.81e-12!80;UBERON:0001474!1.04e-09!86;UBERON:0002405!8.48e-08!115;UBERON:0000178!2.79e-07!15;UBERON:0000179!2.79e-07!15;UBERON:0000463!2.79e-07!15;UBERON:0004765!7.14e-07!101;UBERON:0001434!7.14e-07!101|ontology_enrichment_uberon_v019=UBERON:0000178;7.64e-10;15!UBERON:0000179;7.64e-10;15!UBERON:0000463;7.64e-10;15!UBERON:0002390;6.18e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-24,98;UBERON:0003061,1.28e-24,98;UBERON:0002193,5.52e-22,108;UBERON:0002371,6.96e-16,76;UBERON:0002405,8.13e-15,93;UBERON:0001474,1.30e-13,82;UBERON:0004765,4.04e-11,90;UBERON:0000178,8.09e-10,15;UBERON:0000179,8.09e-10,15;UBERON:0000463,8.09e-10,15;UBERON:0001434,1.16e-08,100|phase1_expression=0,0,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0,0,1.39560233594486,0.436882744260345,1.05506791291381,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.821246550437305,0.627713197974014,0.229240217243854,0.164201178899891,0.157421562627358,75.9193054318385,2.68680578668049,4.18003532953405,0,0.90361775633475,0,1.16200800870452,0,1.17440175733939,1.10799081706375,1.20326668482085,1.95309783644267,0.671746422719773,1.94336199611388,0.77272670290256,14.2490274003973,15.1150377475524,11.1588668146395,6.97287110717054,5.75635043230556,3.09706370895104,1.7261543539329,1.5369642391746,0.47296445977717,5.5159308917859,0.645484683583826,2.70852973188684,7.71793592124679,3.82068610080984,2.47195832889593,4.89734227793444,1.92557416245656,2.55734850319616,4.61791820261403,4.18873681005427,4.68847225585964,4.06292934080018,0.56738522469114,3.11411124497787,2.26123798731069,2.08593167368081,0.868755378820466,3.63239701580021,1.47311054395026,3.16462387440884,24.5056132121852,30.8276234949313,15.3050811221114,1.34794357375794,0.450530678524519,0.48217676009124,80.3735937350321,94.0875883151696,53.7032612068024,0,1.09227722252426,0,1.70692089026603,0.400395987036012,4.02326707968138,1.98313461835459,0,0,1.17447437874188,0,1.32171328579026,0.560508562981536,1.58030450865046,2.16380747125216,4.71612915298998,4.31763147898969,6.52027332023645,3.58514493296949,4.73447805734733,9.74133642039557,9.13565746458423,10.3112067616193,9.74749136167933,5.41607727530031,18.1889674010459,14.1764688840267,6.74195408875072,3.31620021343018,2.89803085735052,1.92772532110679,2.1403266247177,5.22677619024884,3.28597093822942,0.766440987203842,2.40539211837841,0.759059076058509,3.82278497188916,3.90650072313851,2.85135613334512,1.95747654801105,1.79181255616186,6.2465363276172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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16188 | |||
|TSSclassifier=S | |||
|UniProt=Q9BQ89 | |||
|association_with_transcript=42bp_to_ENST00000541082,NM_031424,uc002weh.1_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_4_at_FAM110A_5end | |||
|id=chr20:825327..825342,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.43e-20!140;CL:0002057!4.37e-18!42;CL:0000037!8.13e-18!172;CL:0000566!8.13e-18!172;CL:0000988!2.49e-17!182;CL:0002032!7.76e-17!165;CL:0000837!7.76e-17!165;CL:0000860!1.29e-16!45;CL:0002031!1.83e-16!124;CL:0000766!2.77e-16!76;CL:0002087!9.29e-16!119;CL:0000839!8.76e-13!70;CL:0000763!1.06e-12!112;CL:0000049!1.06e-12!112;CL:0000557!1.25e-12!71;CL:0002009!9.23e-12!65;CL:0002194!3.24e-11!63;CL:0000576!3.24e-11!63;CL:0000040!3.24e-11!63;CL:0000559!3.24e-11!63;CL:0000084!7.50e-08!25;CL:0000827!7.50e-08!25;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-13;33!CL:0002057;1.54e-13;33!CL:0000576;4.89e-12;48!CL:0000766;5.65e-12;69!CL:0000473;2.68e-10;39!CL:0000234;2.68e-10;39!CL:0000791;4.47e-10;18!CL:0000789;4.47e-10;18!CL:0002419;4.47e-10;18!CL:0000084;4.63e-09;25!CL:0000625;3.94e-08;11!CL:0000094;4.92e-08;8!CL:0000763;7.62e-08;100!CL:0002087;1.16e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.12e-28,136;CL:0000037,2.01e-27,168;CL:0000988,6.40e-26,177;CL:0002032,3.10e-25,161;CL:0000837,3.10e-25,161;CL:0000766,2.18e-23,72;CL:0002031,1.25e-22,120;CL:0000860,3.39e-22,42;CL:0002057,3.39e-22,42;CL:0002087,2.12e-21,115;CL:0000473,5.02e-20,48;CL:0000234,5.02e-20,48;CL:0000763,1.34e-19,108;CL:0000049,1.34e-19,108;CL:0000839,1.22e-17,66;CL:0000557,2.23e-17,67;CL:0002009,2.80e-15,61;CL:0002194,4.09e-15,59;CL:0000576,4.09e-15,59;CL:0000040,4.09e-15,59;CL:0000559,4.09e-15,59;CL:0000791,1.84e-10,18;CL:0000789,1.84e-10,18;CL:0002420,1.84e-10,18;CL:0002419,1.84e-10,18;CL:0000790,1.84e-10,18;CL:0000084,2.97e-09,25;CL:0000827,2.97e-09,25;CL:0002393,5.19e-09,9;CL:0002397,5.19e-09,9;CL:0000625,1.39e-08,11;CL:0000094,4.14e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-16;42!CL:0000790;4.47e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.54e-18!102;UBERON:0003061!5.54e-18!102;UBERON:0002193!8.66e-16!112;UBERON:0002371!8.81e-12!80;UBERON:0001474!1.04e-09!86;UBERON:0002405!8.48e-08!115;UBERON:0000178!2.79e-07!15;UBERON:0000179!2.79e-07!15;UBERON:0000463!2.79e-07!15;UBERON:0004765!7.14e-07!101;UBERON:0001434!7.14e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.64e-10;15!UBERON:0000179;7.64e-10;15!UBERON:0000463;7.64e-10;15!UBERON:0002390;6.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-24,98;UBERON:0003061,1.28e-24,98;UBERON:0002193,5.52e-22,108;UBERON:0002371,6.96e-16,76;UBERON:0002405,8.13e-15,93;UBERON:0001474,1.30e-13,82;UBERON:0004765,4.04e-11,90;UBERON:0000178,8.09e-10,15;UBERON:0000179,8.09e-10,15;UBERON:0000463,8.09e-10,15;UBERON:0001434,1.16e-08,100 | |||
|phase1_expression=0,0,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0,0,1.39560233594486,0.436882744260345,1.05506791291381,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.821246550437305,0.627713197974014,0.229240217243854,0.164201178899891,0.157421562627358,75.9193054318385,2.68680578668049,4.18003532953405,0,0.90361775633475,0,1.16200800870452,0,1.17440175733939,1.10799081706375,1.20326668482085,1.95309783644267,0.671746422719773,1.94336199611388,0.77272670290256,14.2490274003973,15.1150377475524,11.1588668146395,6.97287110717054,5.75635043230556,3.09706370895104,1.7261543539329,1.5369642391746,0.47296445977717,5.5159308917859,0.645484683583826,2.70852973188684,7.71793592124679,3.82068610080984,2.47195832889593,4.89734227793444,1.92557416245656,2.55734850319616,4.61791820261403,4.18873681005427,4.68847225585964,4.06292934080018,0.56738522469114,3.11411124497787,2.26123798731069,2.08593167368081,0.868755378820466,3.63239701580021,1.47311054395026,3.16462387440884,24.5056132121852,30.8276234949313,15.3050811221114,1.34794357375794,0.450530678524519,0.48217676009124,80.3735937350321,94.0875883151696,53.7032612068024,0,1.09227722252426,0,1.70692089026603,0.400395987036012,4.02326707968138,1.98313461835459,0,0,1.17447437874188,0,1.32171328579026,0.560508562981536,1.58030450865046,2.16380747125216,4.71612915298998,4.31763147898969,6.52027332023645,3.58514493296949,4.73447805734733,9.74133642039557,9.13565746458423,10.3112067616193,9.74749136167933,5.41607727530031,18.1889674010459,14.1764688840267,6.74195408875072,3.31620021343018,2.89803085735052,1.92772532110679,2.1403266247177,5.22677619024884,3.28597093822942,0.766440987203842,2.40539211837841,0.759059076058509,3.82278497188916,3.90650072313851,2.85135613334512,1.95747654801105,1.79181255616186,6.24653632761729,3.07810427657222,1.64225599384209,2.01606743224732,2.94184215361858,3.47578569318718,0,0,0,0,0,0.289693037921647,0,0,0.472674085820339,0.886917589850256,0.351339142772504,0.785874452986276,0.728590576585084,1.48313777113772,0,1.21890816109487,0.664789802594326,0,0,0,0,0,1.04142150482278,0,0,1.10047216776027,0,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0.357198913136319,0.22452937262617,0,0,0.949265659568129,0.366403487860815,2.63560834872127,3.87780264148325,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0.204154171254893,0.491337269247072,0,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.567160915800105,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,2.51239109112286,0.272746120590835,1.43402297694502,0.853815942907168,1.32529768321485,1.74290914304278,3.21349270547648,2.01856680700503,4.37972830890996,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0.982827216677626,0.590789906681404,3.5317047953172,0.122988438543114,0,0.658501712451753,0,1.00528972411631,1.66659201285353,0,1.03993478527958,0,0.927443239800615,0.117408694235822,0,0.462985512576611,0.380508304469197,5.53143078571493,3.43394464837949,0,0,0.445893486866185,0.93733833986777,0,0.141775097242386,0.179117045405697,0.581267877027924,0.766765358330422,0,25.0938036937694,11.6103744702832,9.07955706526857,11.614303875227,0,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0,0,0,0,3.12022310734098,0.514414748524284,1.41849132023278,0.532844358032199,0,0,0.823240336780769,0,0,1.58390374586686,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0.289562613335158,0.410952645100767,0.179060963239896,0,1.57624608161542,4.9594342217689,3.7219480521127,0.76228387266739,2.60279707715243,10.05275456611,9.71594338939223,9.56908127479745,6.74106321552464,20.9413021442817,3.31532410748828,0.12269149171914,0.500170521059677,0.542530047399471,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,4.13536052245775,12.0799952458425,3.52200940751366,0.303127571446259,0,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,1.53512174720011,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,1.00253235151642,0.828728900423067,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0.784349769176855,2.92278449306521,0.105551628892876,0,0.850468526382578,0.431831832204279,0,0.541892875087706,2.50844886927427,0,1.66215201785745,1.56712328305525,1.53481913652154,0.261435451024901,0.256450125116389,0,0.325378394664303,1.13345112812495,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0.386682873168488,0.154048617114644,0.307007349452259,0,0,0,0,0.178064071293475,0.165284915360978,0.384380134730212,0.255225424989168,0,0,0,0,0.308033580176089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| |||
|short_description=p4@FAM110A | |||
}} |
Revision as of 09:43, 12 September 2013
Short description: | p4@FAM110A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FAM110A_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 42bp_to_ENST00000541082, NM_031424, uc002weh.1_5end |
EntrezGene: | FAM110A |
HGNC: | 16188 |
UniProt: | Q9BQ89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-24 | 98 |
blood island | 1.28e-24 | 98 |
hemolymphoid system | 5.52e-22 | 108 |
bone marrow | 6.96e-16 | 76 |
immune system | 8.13e-15 | 93 |
bone element | 1.30e-13 | 82 |
skeletal element | 4.04e-11 | 90 |
blood | 8.09e-10 | 15 |
haemolymphatic fluid | 8.09e-10 | 15 |
organism substance | 8.09e-10 | 15 |
skeletal system | 1.16e-08 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.