FFCP PHASE1:Hg19::chr22:18105870..18105871,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4086|description=CAGE_peak_at_chr22:18105870..18105871,-|id=chr22:18105870..18105871,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002595;1.51e-15;5!CL:0002262;2.48e-10;2!CL:1000398;2.48e-10;2!CL:0002363;2.48e-10;2!CL:0002596;2.48e-10;2!CL:0002593;2.48e-10;2!CL:0002600;2.48e-10;2!CL:0002567;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0002595,1.88e-15,5;CL:0002596,1.89e-10,2;CL:0002262,2.27e-10,2;CL:1000398,2.27e-10,2;CL:0002600,2.99e-10,2;CL:0002593,3.27e-10,2;CL:0002363,3.58e-10,2;CL:0000008,3.58e-10,2;CL:0002567,2.05e-07,3;CL:0000192,4.80e-07,43;CL:0000514,4.80e-07,43|ontology_enrichment_development_v019=UBERON:0005754;1.08e-19;1!UBERON:0006298;2.71e-19;1!UBERON:0007297;1.57e-10;2!CL:0000008;2.48e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003513;6.61e-24;7!UBERON:0000998;1.08e-19;1!UBERON:0006868;1.08e-19;1!UBERON:0001736;2.71e-19;1!UBERON:0003834;1.51e-15;5!UBERON:0001533;1.51e-15;5!UBERON:0001281;2.48e-10;2!UBERON:0003497;2.48e-10;2!UBERON:0003909;2.48e-10;2!UBERON:0001829;2.48e-10;2!UBERON:0003566;2.48e-10;2!UBERON:0003835;2.48e-10;2!UBERON:0001777;2.48e-10;2!UBERON:0002456;2.48e-10;2!UBERON:0005396;2.48e-10;2!UBERON:0006947;1.93e-07;3!UBERON:0004054;1.93e-07;3!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003513,7.73e-24,7;UBERON:0000998,1.08e-19,1;UBERON:0006868,1.08e-19,1;UBERON:0001736,3.25e-19,1;UBERON:0006298,3.25e-19,1;UBERON:0003834,1.88e-15,5;UBERON:0001533,1.88e-15,5;UBERON:0005396,1.89e-10,2;UBERON:0001281,2.27e-10,2;UBERON:0003497,2.27e-10,2;UBERON:0003909,2.27e-10,2;UBERON:0003835,2.27e-10,2;UBERON:0001829,2.72e-10,2;UBERON:0002456,3.27e-10,2;UBERON:0003566,3.58e-10,2;UBERON:0001777,3.58e-10,2;UBERON:0000058,2.98e-09,19;UBERON:0000080,4.43e-09,9;UBERON:0002120,4.43e-09,9;UBERON:0004875,4.43e-09,9;UBERON:0005721,4.43e-09,9;UBERON:0005754,4.43e-09,9;UBERON:0007297,4.43e-09,9;UBERON:0004876,1.37e-07,11;UBERON:0006947,1.93e-07,3;UBERON:0004054,1.93e-07,3;UBERON:0001280,2.47e-07,3;UBERON:0004647,2.47e-07,3;UBERON:0005171,2.47e-07,3;UBERON:0003887,5.00e-07,12;UBERON:0005256,6.26e-07,122|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0.464845549297286,0,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0.235624804691373,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,12.1300375580147,0,0,0,1.31178950409327,0,0,0,0,0,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4086 | |||
|description=CAGE_peak_at_chr22:18105870..18105871,- | |||
|id=chr22:18105870..18105871,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.51e-15;5!CL:0002262;2.48e-10;2!CL:1000398;2.48e-10;2!CL:0002363;2.48e-10;2!CL:0002596;2.48e-10;2!CL:0002593;2.48e-10;2!CL:0002600;2.48e-10;2!CL:0002567;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.88e-15,5;CL:0002596,1.89e-10,2;CL:0002262,2.27e-10,2;CL:1000398,2.27e-10,2;CL:0002600,2.99e-10,2;CL:0002593,3.27e-10,2;CL:0002363,3.58e-10,2;CL:0000008,3.58e-10,2;CL:0002567,2.05e-07,3;CL:0000192,4.80e-07,43;CL:0000514,4.80e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.08e-19;1!UBERON:0006298;2.71e-19;1!UBERON:0007297;1.57e-10;2!CL:0000008;2.48e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;6.61e-24;7!UBERON:0000998;1.08e-19;1!UBERON:0006868;1.08e-19;1!UBERON:0001736;2.71e-19;1!UBERON:0003834;1.51e-15;5!UBERON:0001533;1.51e-15;5!UBERON:0001281;2.48e-10;2!UBERON:0003497;2.48e-10;2!UBERON:0003909;2.48e-10;2!UBERON:0001829;2.48e-10;2!UBERON:0003566;2.48e-10;2!UBERON:0003835;2.48e-10;2!UBERON:0001777;2.48e-10;2!UBERON:0002456;2.48e-10;2!UBERON:0005396;2.48e-10;2!UBERON:0006947;1.93e-07;3!UBERON:0004054;1.93e-07;3!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,7.73e-24,7;UBERON:0000998,1.08e-19,1;UBERON:0006868,1.08e-19,1;UBERON:0001736,3.25e-19,1;UBERON:0006298,3.25e-19,1;UBERON:0003834,1.88e-15,5;UBERON:0001533,1.88e-15,5;UBERON:0005396,1.89e-10,2;UBERON:0001281,2.27e-10,2;UBERON:0003497,2.27e-10,2;UBERON:0003909,2.27e-10,2;UBERON:0003835,2.27e-10,2;UBERON:0001829,2.72e-10,2;UBERON:0002456,3.27e-10,2;UBERON:0003566,3.58e-10,2;UBERON:0001777,3.58e-10,2;UBERON:0000058,2.98e-09,19;UBERON:0000080,4.43e-09,9;UBERON:0002120,4.43e-09,9;UBERON:0004875,4.43e-09,9;UBERON:0005721,4.43e-09,9;UBERON:0005754,4.43e-09,9;UBERON:0007297,4.43e-09,9;UBERON:0004876,1.37e-07,11;UBERON:0006947,1.93e-07,3;UBERON:0004054,1.93e-07,3;UBERON:0001280,2.47e-07,3;UBERON:0004647,2.47e-07,3;UBERON:0005171,2.47e-07,3;UBERON:0003887,5.00e-07,12;UBERON:0005256,6.26e-07,122 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0.464845549297286,0,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0.235624804691373,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,12.1300375580147,0,0,0,1.31178950409327,0,0,0,0,0,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0.337884881306145,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,2.54032230114557,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0.352894871715692,0,1.46067277649303,1.37618785021362,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:18105870..18105871,- | |||
}} |
Revision as of 10:55, 12 September 2013
Short description: | p@chr22:18105870..18105871, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:18105870..18105871, - |
Coexpression cluster: | C4086_Smooth_Mesothelial_seminal_Fibroblast_Alveolar_Melanocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.88e-15 | 5 |
smooth muscle cell of the carotid artery | 1.89e-10 | 2 |
endothelial cell of sinusoid | 2.27e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.27e-10 | 2 |
smooth muscle cell of trachea | 2.99e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 3.27e-10 | 2 |
keratocyte | 3.58e-10 | 2 |
migratory cranial neural crest cell | 3.58e-10 | 2 |
light melanocyte | 2.05e-07 | 3 |
smooth muscle cell | 4.80e-07 | 43 |
smooth muscle myoblast | 4.80e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 7.73e-24 | 7 |
seminal vesicle | 1.08e-19 | 1 |
seminal fluid secreting gland | 1.08e-19 | 1 |
submandibular gland | 3.25e-19 | 1 |
submandibular gland primordium | 3.25e-19 | 1 |
thoracic segment blood vessel | 1.88e-15 | 5 |
subclavian artery | 1.88e-15 | 5 |
carotid artery segment | 1.89e-10 | 2 |
hepatic sinusoid | 2.27e-10 | 2 |
abdomen blood vessel | 2.27e-10 | 2 |
sinusoid | 2.27e-10 | 2 |
abdominal segment blood vessel | 2.27e-10 | 2 |
major salivary gland | 2.72e-10 | 2 |
internal thoracic artery | 3.27e-10 | 2 |
head connective tissue | 3.58e-10 | 2 |
substantia propria of cornea | 3.58e-10 | 2 |
duct | 2.98e-09 | 19 |
mesonephros | 4.43e-09 | 9 |
pronephros | 4.43e-09 | 9 |
nephrogenic cord | 4.43e-09 | 9 |
pronephric mesoderm | 4.43e-09 | 9 |
rostral part of nephrogenic cord | 4.43e-09 | 9 |
presumptive pronephric mesoderm | 4.43e-09 | 9 |
urogenital ridge | 1.37e-07 | 11 |
male genital duct | 1.93e-07 | 3 |
internal male genitalia | 1.93e-07 | 3 |
liver parenchyma | 2.47e-07 | 3 |
liver lobule | 2.47e-07 | 3 |
hepatic duct | 2.47e-07 | 3 |
intraembryonic coelom | 5.00e-07 | 12 |
trunk mesenchyme | 6.26e-07 | 122 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.