FFCP PHASE1:Hg19::chr2:220896144..220896147,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C42|description=CAGE_peak_at_chr2:220896144..220896147,+|id=chr2:220896144..220896147,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002097;6.30e-21;2!CL:0000174;1.96e-14;3|ontology_enrichment_celltype_v019_2=CL:0002097,5.70e-21,2;CL:0000174,1.83e-14,3|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3|ontology_enrichment_disease=DOID:1749!4.41e-10!14;DOID:0050687!4.58e-08!143;DOID:305!1.18e-07!106|ontology_enrichment_disease_v019=DOID:0050619;1.21e-40;1!DOID:1357;1.21e-40;1!DOID:5409;2.53e-11;4!DOID:0050615;5.42e-11;16!DOID:170;7.01e-08;6!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7|ontology_enrichment_disease_v019_2=DOID:0050619,1.48e-40,1;DOID:1357,1.48e-40,1;DOID:5409,2.53e-11,4;DOID:0050615,5.55e-11,16;DOID:170,6.78e-08,6;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7|ontology_enrichment_uberon=UBERON:0001869!5.67e-13!32;UBERON:0000956!6.38e-13!25;UBERON:0000203!6.38e-13!25;UBERON:0001893!5.14e-12!34;UBERON:0001950!5.98e-12!20;UBERON:0002619!1.09e-10!22;UBERON:0002791!1.16e-10!33;UBERON:0002020!2.92e-10!34;UBERON:0003528!2.92e-10!34;UBERON:0002780!2.13e-09!41;UBERON:0001890!2.13e-09!41;UBERON:0006240!2.13e-09!41;UBERON:0003080!4.26e-09!42;UBERON:0001049!9.26e-08!57;UBERON:0005068!9.26e-08!57;UBERON:0006241!9.26e-08!57;UBERON:0007135!9.26e-08!57;UBERON:0000033!4.28e-07!123;UBERON:0003056!4.95e-07!61;UBERON:0000200!6.55e-07!6;UBERON:0003075!6.94e-07!86;UBERON:0007284!6.94e-07!86;UBERON:0000344!9.61e-07!12|ontology_enrichment_uberon_v019=UBERON:0001764;1.21e-40;1!UBERON:0001825;1.21e-40;1!UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0002369;1.96e-14;3!UBERON:0001235;1.96e-14;3!UBERON:0006858;1.96e-14;3!UBERON:0003343;2.94e-11;4!UBERON:0004785;2.94e-11;4!UBERON:0000974;6.13e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.48e-40,1;UBERON:0001825,1.48e-40,1;UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0002369,1.83e-14,3;UBERON:0001235,1.83e-14,3;UBERON:0006858,1.83e-14,3;UBERON:0003343,2.80e-11,4;UBERON:0004785,2.80e-11,4;UBERON:0001781,3.79e-11,4;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0000033,3.76e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0,0.274083849293502,0,0.379864775735272,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,2.04170325125305,0,0,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0.53726652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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr2:220896144..220896147,+ | |||
|id=chr2:220896144..220896147,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;6.30e-21;2!CL:0000174;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,5.70e-21,2;CL:0000174,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease=DOID:1749!4.41e-10!14;DOID:0050687!4.58e-08!143;DOID:305!1.18e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.21e-40;1!DOID:1357;1.21e-40;1!DOID:5409;2.53e-11;4!DOID:0050615;5.42e-11;16!DOID:170;7.01e-08;6!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.48e-40,1;DOID:1357,1.48e-40,1;DOID:5409,2.53e-11,4;DOID:0050615,5.55e-11,16;DOID:170,6.78e-08,6;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001869!5.67e-13!32;UBERON:0000956!6.38e-13!25;UBERON:0000203!6.38e-13!25;UBERON:0001893!5.14e-12!34;UBERON:0001950!5.98e-12!20;UBERON:0002619!1.09e-10!22;UBERON:0002791!1.16e-10!33;UBERON:0002020!2.92e-10!34;UBERON:0003528!2.92e-10!34;UBERON:0002780!2.13e-09!41;UBERON:0001890!2.13e-09!41;UBERON:0006240!2.13e-09!41;UBERON:0003080!4.26e-09!42;UBERON:0001049!9.26e-08!57;UBERON:0005068!9.26e-08!57;UBERON:0006241!9.26e-08!57;UBERON:0007135!9.26e-08!57;UBERON:0000033!4.28e-07!123;UBERON:0003056!4.95e-07!61;UBERON:0000200!6.55e-07!6;UBERON:0003075!6.94e-07!86;UBERON:0007284!6.94e-07!86;UBERON:0000344!9.61e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.21e-40;1!UBERON:0001825;1.21e-40;1!UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0002369;1.96e-14;3!UBERON:0001235;1.96e-14;3!UBERON:0006858;1.96e-14;3!UBERON:0003343;2.94e-11;4!UBERON:0004785;2.94e-11;4!UBERON:0000974;6.13e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.48e-40,1;UBERON:0001825,1.48e-40,1;UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0002369,1.83e-14,3;UBERON:0001235,1.83e-14,3;UBERON:0006858,1.83e-14,3;UBERON:0003343,2.80e-11,4;UBERON:0004785,2.80e-11,4;UBERON:0001781,3.79e-11,4;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0000033,3.76e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0,0.274083849293502,0,0.379864775735272,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,2.04170325125305,0,0,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0.537266523244462,0,0.877136198314828,0.706756583783524,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.798169295285756,0.41023272848151,0,0.138314504928436,0.645902582527404,1.42769420259154,0.490738592505128,2.47736419030255,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.472763092328763,0,0.826747186004736,0.507326481551255,0,0,0,0,0.638812138197976,0,0,0,0,0.0887023701626388,0,0,0,0.263091094251396,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,9.82630913738952,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0.244209805832924,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr2:220896144..220896147,+ | |||
}} |
Revision as of 17:02, 12 September 2013
Short description: | p@chr2:220896144..220896147, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:220896144..220896147, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 5.70e-21 | 2 |
steroid hormone secreting cell | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.48e-40 | 1 |
paranasal sinus | 1.48e-40 | 1 |
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
adrenal gland | 1.83e-14 | 3 |
adrenal cortex | 1.83e-14 | 3 |
adrenal/interrenal gland | 1.83e-14 | 3 |
mucosa of oral region | 2.80e-11 | 4 |
respiratory system mucosa | 2.80e-11 | 4 |
layer of retina | 3.79e-11 | 4 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
head | 3.76e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.48e-40 | 1 |
maxillary sinus cancer | 1.48e-40 | 1 |
lung small cell carcinoma | 2.53e-11 | 4 |
respiratory system cancer | 5.55e-11 | 16 |
endocrine gland cancer | 6.78e-08 | 6 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.