FFCP PHASE1:Mm9::chr11:54336315..54336326,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=192786|HGNC=|MCL_coexpression_id=36|UniProt=Q3TKC6,Q3UPQ2,Q562E3,Q5NCJ0,Q8BLC8|association_with_transcript=-20bp_to_NM_001252494,NM_001252496,NM_175258_5end|description=CAGE_peak_6_at_Rapgef6_5end|id=chr11:54336315..54336326,+|ontology_enrichment_celltype=CL:0000791!2.83e-07!9;CL:0000789!2.83e-07!9;CL:0002420!2.83e-07!9;CL:0002419!2.83e-07!9;CL:0000790!2.83e-07!9;CL:0000624!9.94e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,1.55e-13,9;CL:0000789,1.55e-13,9;CL:0002420,1.55e-13,9;CL:0002419,1.55e-13,9;CL:0000790,1.55e-13,9;CL:0000624,2.11e-12,8;CL:0000084,1.31e-10,11;CL:0000827,1.31e-10,11;CL:0000838,1.62e-09,12;CL:0000893,1.69e-09,6;CL:0002489,1.69e-09,6;CL:0000898,1.69e-09,6;CL:0000809,1.69e-09,6;CL:0000810,1.69e-09,6;CL:0000895,1.69e-09,6;CL:0000808,1.69e-09,6;CL:0000894,1.69e-09,6;CL:0000806,1.69e-09,6;CL:0000807,1.69e-09,6;CL:0000805,1.69e-09,6;CL:0002425,1.69e-09,6;CL:0002436,1.69e-09,6;CL:0002427,1.69e-09,6;CL:0002428,1.69e-09,6;CL:0002429,1.69e-09,6;CL:0002433,1.69e-09,6;CL:0002431,1.69e-09,6;CL:0002432,1.69e-09,6;CL:0000542,1.35e-08,13;CL:0000051,1.35e-08,13;CL:0002031,1.56e-08,25;CL:0000988,9.98e-07,32;CL:0002032,9.98e-07,32;CL:0000037,9.98e-07,32;CL:0000837,9.98e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.86e-09!29;UBERON:0006562!2.90e-08!24;UBERON:0001557!2.90e-08!24;UBERON:0001042!2.90e-08!24;UBERON:0008814!2.90e-08!24;UBERON:0009145!2.90e-08!24;UBERON:0002370!8.39e-08!23;UBERON:0000974!8.39e-08!23;UBERON:0004807!8.39e-08!23;UBERON:0005058!8.39e-08!23;UBERON:0003351!8.39e-08!23;UBERON:0009113!8.39e-08!23;UBERON:0003295!8.39e-08!23;UBERON:0009722!8.39e-08!23;UBERON:0005562!8.39e-08!23;UBERON:0007690!8.39e-08!23;UBERON:0003408!9.07e-08!24;UBERON:0000072!3.58e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.02e-19,29;UBERON:0005057,4.02e-19,29;UBERON:0006562,1.39e-17,24;UBERON:0001557,1.39e-17,24;UBERON:0001042,1.39e-17,24;UBERON:0008814,1.39e-17,24;UBERON:0009145,1.39e-17,24;UBERON:0002370,1.36e-16,23;UBERON:0000974,1.36e-16,23;UBERON:0004807,1.36e-16,23;UBERON:0005058,1.36e-16,23;UBERON:0003351,1.36e-16,23;UBERON:0009113,1.36e-16,23;UBERON:0003295,1.36e-16,23;UBERON:0009722,1.36e-16,23;UBERON:0005562,1.36e-16,23;UBERON:0007690,1.36e-16,23;UBERON:0002390,2.93e-16,45;UBERON:0003061,2.93e-16,45;UBERON:0002193,3.73e-16,48;UBERON:0002405,3.73e-16,48;UBERON:0003408,1.16e-15,24;UBERON:0000072,5.83e-15,27;UBERON:0000077,1.21e-14,35;UBERON:0007811,8.74e-10,36;UBERON:0003929,9.39e-10,55;UBERON:0003081,1.04e-09,87;UBERON:0000153,5.51e-09,43;UBERON:0000065,7.13e-09,41;UBERON:0000490,7.60e-09,66;UBERON:0001004,1.58e-08,42;UBERON:0001041,2.09e-07,80;UBERON:0005911,4.74e-07,69;UBERON:0000926,5.21e-07,120;UBERON:0004120,5.21e-07,120;UBERON:0006603,5.21e-07,120;UBERON:0004921,5.91e-07,114|phase1_expression=0.160148847104794,1.04692622291808,0,0,1.00179145989269,0.503637815735669,1.40167584357315,4.51931632045517,3.51971805379167,3.27690336850791,2.56826952338257,3.03134204182278,2.73921167889929,3.58423649917889,1.33243904726265,2.42970320867791,1.39912375625629,0.946386496074713,1.7824876368746,2.12194825899015,0.765389611359628,0.496454756004426,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,1.51218077855958,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.664938581433969,1.42918549383658,2.92972141515835,0,4.71171369576418,3.52938892818609,3.41522742479223,3.39857247121808,0.125896817975577,0.608261587317087,0,0,0,0,0,0,1.43752564364972,0.671130424230945,4.35217285206807,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0,0.630974884054146,0,0,0.122490799214954,0.479227355091182,0.919218786610021,0,0.255374676170375,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0.37863096666592,0.226714680320357,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0.253359865475099,0,0.45673551887624,2.33044095282455,0,0.173485326766136,0.913396434936424,0.691846491768175,0.301445281105245,0.470354828542819,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,2.42437626567611,3.72783522436244,0.878342391034642,0.209446706813455,1.78819938646014,0.239630249011841,1.19980546198682,0.762421362438388,0.898743836428936,0,1.00523481690292,0.869121600961382,0.255715457330331,0,0.162241263067758,0.407357455401265,0.746441823660558,0.252722758433675,0.631325567659422,0.130120442962704,0.689706313300419,0.180062129805349,0.60281927134286,0.204109497453984,0.384341160854549,0.468508622798644,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0,0.834141747676794,1.0447564995665,1.02891068203972,0.796137067273973,0,0.51469581422943,0,1.03562886267751,0.938104239924385,0.720248245844059,1.42046841351126,0.787056926989615,0.308534225774757,0.465067889500816,1.07309360559848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| ||
|EntrezGene=192786 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q3TKC6,Q3UPQ2,Q562E3,Q5NCJ0,Q8BLC8 | |||
|association_with_transcript=-20bp_to_NM_001252494,NM_001252496,NM_175258_5end | |||
|description=CAGE_peak_6_at_Rapgef6_5end | |||
|id=chr11:54336315..54336326,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.83e-07!9;CL:0000789!2.83e-07!9;CL:0002420!2.83e-07!9;CL:0002419!2.83e-07!9;CL:0000790!2.83e-07!9;CL:0000624!9.94e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.55e-13,9;CL:0000789,1.55e-13,9;CL:0002420,1.55e-13,9;CL:0002419,1.55e-13,9;CL:0000790,1.55e-13,9;CL:0000624,2.11e-12,8;CL:0000084,1.31e-10,11;CL:0000827,1.31e-10,11;CL:0000838,1.62e-09,12;CL:0000893,1.69e-09,6;CL:0002489,1.69e-09,6;CL:0000898,1.69e-09,6;CL:0000809,1.69e-09,6;CL:0000810,1.69e-09,6;CL:0000895,1.69e-09,6;CL:0000808,1.69e-09,6;CL:0000894,1.69e-09,6;CL:0000806,1.69e-09,6;CL:0000807,1.69e-09,6;CL:0000805,1.69e-09,6;CL:0002425,1.69e-09,6;CL:0002436,1.69e-09,6;CL:0002427,1.69e-09,6;CL:0002428,1.69e-09,6;CL:0002429,1.69e-09,6;CL:0002433,1.69e-09,6;CL:0002431,1.69e-09,6;CL:0002432,1.69e-09,6;CL:0000542,1.35e-08,13;CL:0000051,1.35e-08,13;CL:0002031,1.56e-08,25;CL:0000988,9.98e-07,32;CL:0002032,9.98e-07,32;CL:0000037,9.98e-07,32;CL:0000837,9.98e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.86e-09!29;UBERON:0006562!2.90e-08!24;UBERON:0001557!2.90e-08!24;UBERON:0001042!2.90e-08!24;UBERON:0008814!2.90e-08!24;UBERON:0009145!2.90e-08!24;UBERON:0002370!8.39e-08!23;UBERON:0000974!8.39e-08!23;UBERON:0004807!8.39e-08!23;UBERON:0005058!8.39e-08!23;UBERON:0003351!8.39e-08!23;UBERON:0009113!8.39e-08!23;UBERON:0003295!8.39e-08!23;UBERON:0009722!8.39e-08!23;UBERON:0005562!8.39e-08!23;UBERON:0007690!8.39e-08!23;UBERON:0003408!9.07e-08!24;UBERON:0000072!3.58e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.02e-19,29;UBERON:0005057,4.02e-19,29;UBERON:0006562,1.39e-17,24;UBERON:0001557,1.39e-17,24;UBERON:0001042,1.39e-17,24;UBERON:0008814,1.39e-17,24;UBERON:0009145,1.39e-17,24;UBERON:0002370,1.36e-16,23;UBERON:0000974,1.36e-16,23;UBERON:0004807,1.36e-16,23;UBERON:0005058,1.36e-16,23;UBERON:0003351,1.36e-16,23;UBERON:0009113,1.36e-16,23;UBERON:0003295,1.36e-16,23;UBERON:0009722,1.36e-16,23;UBERON:0005562,1.36e-16,23;UBERON:0007690,1.36e-16,23;UBERON:0002390,2.93e-16,45;UBERON:0003061,2.93e-16,45;UBERON:0002193,3.73e-16,48;UBERON:0002405,3.73e-16,48;UBERON:0003408,1.16e-15,24;UBERON:0000072,5.83e-15,27;UBERON:0000077,1.21e-14,35;UBERON:0007811,8.74e-10,36;UBERON:0003929,9.39e-10,55;UBERON:0003081,1.04e-09,87;UBERON:0000153,5.51e-09,43;UBERON:0000065,7.13e-09,41;UBERON:0000490,7.60e-09,66;UBERON:0001004,1.58e-08,42;UBERON:0001041,2.09e-07,80;UBERON:0005911,4.74e-07,69;UBERON:0000926,5.21e-07,120;UBERON:0004120,5.21e-07,120;UBERON:0006603,5.21e-07,120;UBERON:0004921,5.91e-07,114 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0,0,1.00179145989269,0.503637815735669,1.40167584357315,4.51931632045517,3.51971805379167,3.27690336850791,2.56826952338257,3.03134204182278,2.73921167889929,3.58423649917889,1.33243904726265,2.42970320867791,1.39912375625629,0.946386496074713,1.7824876368746,2.12194825899015,0.765389611359628,0.496454756004426,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,1.51218077855958,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.664938581433969,1.42918549383658,2.92972141515835,0,4.71171369576418,3.52938892818609,3.41522742479223,3.39857247121808,0.125896817975577,0.608261587317087,0,0,0,0,0,0,1.43752564364972,0.671130424230945,4.35217285206807,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0,0.630974884054146,0,0,0.122490799214954,0.479227355091182,0.919218786610021,0,0.255374676170375,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0.37863096666592,0.226714680320357,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0.253359865475099,0,0.45673551887624,2.33044095282455,0,0.173485326766136,0.913396434936424,0.691846491768175,0.301445281105245,0.470354828542819,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,2.42437626567611,3.72783522436244,0.878342391034642,0.209446706813455,1.78819938646014,0.239630249011841,1.19980546198682,0.762421362438388,0.898743836428936,0,1.00523481690292,0.869121600961382,0.255715457330331,0,0.162241263067758,0.407357455401265,0.746441823660558,0.252722758433675,0.631325567659422,0.130120442962704,0.689706313300419,0.180062129805349,0.60281927134286,0.204109497453984,0.384341160854549,0.468508622798644,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0,0.834141747676794,1.0447564995665,1.02891068203972,0.796137067273973,0,0.51469581422943,0,1.03562886267751,0.938104239924385,0.720248245844059,1.42046841351126,0.787056926989615,0.308534225774757,0.465067889500816,1.07309360559848,1.28441876603886,0.658239399653922,0.985004784474571,0.405344047729279,0.292399974850665,0.439100230582101,0.134206418760372,0.841159794256509,0.308713837137853,0.660837565967596,0.528901133327089,0.426576501070468,1.16118335930219,0.515469845288373,0.80673409849337,0.444756087689741,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.864552199498777,0.995706366271836,0,0.799739588268102,1.1270773567308,0.610953983535943,0.387904974335251,0.350679099451593,0.252946148497029,0.295220295959204,0,0,0,1.50160595144485,1.17935397067922,0.449724224769707,0.811440485554012,0.72353147925725,0.25462585178142,1.15078454980324,1.13494658742525,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.947457058852424,0.814824882210129,1.18821560042632,0,0.502518772325447,0,0.390267295715598,0.788175720530955,0.664394068946325,0.478364305972461,0.81931657357869,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0.315508219416257,0,0.646270193198397,0.477937595905104,0.445597348164788,0,0,0,0,0.963963949265421,0.567760340833074,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.922305443831782,0,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0.847328283455281,0.882113592219848,0.49465875882444,1.13025098687134,0.663442174209714,0.358117032009409,0.164140899745061,0.874442509889552,0.18542530201051,2.39219233116994,0,0.740778109478847,1.88368457004691,1.91371918809435,2.51655990527175,0.849892149969277,0.839708713941948,1.38199973804424,0,0.632671987162271,1.21991680276109,0.432021363287205,0.418176592028937,1.09181281873089,0.269728692769641,0.0826534557253359,0.523511883968059,0.518459893167171,0.621339313086926,1.69107881605257,0.897099276263873,0.165458490457098,0.194451188344048,0.387479470433193,0,0.234714477291508,0.651021924219751,0.943734099831398,0.724752362478018,0.576060012515731,2.52808896502543,1.21635129174099,0.718976700153791,0.389762468933385,1.07416017400489,1.58945083825012,1.56254084375959,2.21534290761866,1.9183625490148,2.66723823292499,2.52065462842101,2.72882066071307,3.36741445741153,3.03879945672079,1.58711268530648,0.887943813496259,1.34570784914214,1.00730769818447,0.386379188064381,0.750729901804728,1.64836461840539,0.857473516316263,1.00314420807073,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0.906284817968409,0,0.31136204275253,0,0.170733605754134,1.94485373654635,0.628839487883947,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0,0.25347929989024,0.377252682772152,0.468207537349412,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| |||
|short_description=p6@Rapgef6 | |||
}} |
Revision as of 19:59, 12 September 2013
Short description: | p6@Rapgef6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rapgef6_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -20bp_to_NM_001252494, NM_001252496, NM_175258_5end |
EntrezGene: | Rapgef6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.