FFCP PHASE1:Mm9::chr11:96691218..96691265,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18023|HGNC=|MCL_coexpression_id=1|UniProt=Q6GTN8|association_with_transcript=3bp_to_ENSMUST00000107657_5end|description=CAGE_peak_2_at_Nfe2l1_5end|id=chr11:96691218..96691265,-|ontology_enrichment_celltype=CL:0000221!1.33e-07!44;CL:0000133!1.33e-07!44;CL:0002319!2.11e-07!43;CL:0000055!6.75e-07!50|ontology_enrichment_celltype_v019_2=CL:0000221,1.33e-07,44;CL:0000133,1.33e-07,44;CL:0002319,2.11e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.01e-21!73;UBERON:0005743!9.01e-21!73;UBERON:0000073!2.02e-20!75;UBERON:0001016!2.02e-20!75;UBERON:0004121!9.51e-18!102;UBERON:0000924!9.51e-18!102;UBERON:0006601!9.51e-18!102;UBERON:0001049!1.05e-17!52;UBERON:0005068!1.05e-17!52;UBERON:0006241!1.05e-17!52;UBERON:0007135!1.05e-17!52;UBERON:0000955!1.48e-17!50;UBERON:0006238!1.48e-17!50;UBERON:0002616!3.48e-17!49;UBERON:0000033!1.40e-16!63;UBERON:0002346!2.44e-14!71;UBERON:0003075!2.44e-14!71;UBERON:0007284!2.44e-14!71;UBERON:0003080!1.13e-12!40;UBERON:0004111!2.07e-12!122;UBERON:0002780!4.06e-12!39;UBERON:0001890!4.06e-12!39;UBERON:0006240!4.06e-12!39;UBERON:0003056!1.31e-11!49;UBERON:0000025!1.00e-10!114;UBERON:0002020!8.80e-10!34;UBERON:0000468!5.35e-09!333;UBERON:0002791!5.51e-08!29;UBERON:0003528!5.51e-08!29;UBERON:0001893!5.51e-08!29;UBERON:0000922!6.49e-08!328;UBERON:0007811!6.71e-08!86;UBERON:0000480!9.66e-08!308;UBERON:0000467!9.66e-08!308;UBERON:0000062!2.97e-07!269;UBERON:0002050!3.39e-07!317;UBERON:0005423!3.39e-07!317|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.01e-21,73;UBERON:0001016,2.02e-20,75;UBERON:0000073,2.95e-19,54;UBERON:0004121,9.38e-18,95;UBERON:0000924,9.38e-18,95;UBERON:0006601,9.38e-18,95;UBERON:0001049,1.05e-17,52;UBERON:0005068,1.05e-17,52;UBERON:0006241,1.05e-17,52;UBERON:0007135,1.05e-17,52;UBERON:0010314,2.12e-16,92;UBERON:0000955,1.55e-15,47;UBERON:0006238,1.55e-15,47;UBERON:0002616,3.57e-15,46;UBERON:0002346,1.29e-14,64;UBERON:0003075,1.29e-14,64;UBERON:0007284,1.29e-14,64;UBERON:0010371,9.16e-13,73;UBERON:0003080,1.13e-12,40;UBERON:0004111,2.07e-12,122;UBERON:0002780,4.06e-12,39;UBERON:0001890,4.06e-12,39;UBERON:0006240,4.06e-12,39;UBERON:0003056,1.31e-11,49;UBERON:0000025,1.00e-10,114;UBERON:0002020,8.80e-10,34;UBERON:0003528,5.51e-08,29;UBERON:0002791,5.51e-08,29;UBERON:0001893,5.51e-08,29;UBERON:0005423,5.26e-07,304;UBERON:0000922,9.10e-07,320|phase1_expression=31.7094717267492,42.574999732002,41.4049307844478,44.462239062104,37.0662840160297,26.0212871463429,22.1932008565749,11.7502224331834,46.3194895878984,38.8547113694509,23.4568616468942,24.7293692885543,12.497653284978,11.6269135217267,11.6588416635482,10.5287139042709,7.69518065940961,12.9339487796877,12.4774134581222,14.429248161133,26.788636397587,8.53902180327614,5.48519557191764,17.1191892388945,19.7291981717766,24.1177424928308,19.8150518233174,25.6410766896208,20.7125527207448,22.9347418081537,22.8382425974964,6.98533740805594,9.22597181376855,0,9.53210345179206,10.472782657585,13.271008157054,8.78916424547506,10.1573594788094,8.37637990358077,14.1175557127443,7.5135003345429,9.22469670759192,23.9203954153597,26.4593790482933,28.0826530807373,35.2076104956618,46.0033079962742,63.2696206275279,63.5785769972907,35.4165646712167,43.1257693094915,23.3217822420254,15.2326049822382,14.7881271622684,23.4106086792712,26.0745430344269,33.0030139057563,37.4285452590256,37.5583595283143,40.5652098243955,31.1736969503602,24.9002542911119,35.995988691256,26.6993917893083,29.8401648277362,38.9480143673926,41.1113586694063,19.4936471139938,20.9259204414121,23.3460707100034,44.2759025825896,48.1493419274518,17.6386750869534,20.8943126819755,25.7381260250806,56.1590993096882,68.9511625660014,66.9724484997221,42.3354983613922,43.2736554239398,42.7148963856543,68.6790177543397,51.7741601229146,66.9256325262428,28.2843442054721,40.0064423045479,36.7206908275842,25.1410961866171,24.2584707942782,41.7404863730416,17.2084775396277,14.2793980078628,15.6513925574967,20.1430689408777,19.7131830322828,23.1733293217391,10.3962496772615,8.3131521472918,10.2468476607999,31.6897694497531,26.9485602570067,61.153257529595,99.5493384414664,22.0820861831438,24.0691872201344,30.331466700887,23.8644308612835,15.5362730188303,29.3915435348353,24.8084017275574,21.3125834818499,29.5187836487755,22.4576734423408,26.1046929841265,35.6893119376278,32.382540773203,18.6533170426686,21.230653246797,38.0152097376412,24.9550915860245,28.1227646818429,24.2309289583559,31.034764483224,36.0248335719143,18.3929079750186,10.1842855830032,6.59893004092748,9.27612657633372,47.1840514125192,36.1425476226715,26.6387226479273,43.1084314076846,46.5402132341202,42.5965491347098,47.536690078853,29.3297367888911,24.6325801807984,22.492325500597,40.1943944743165,21.4698730888461,22.7603083389138,26.289070951581,29.2367346601287,24.4251031953267,24.725948014976,29.7971484099938,23.0245999957724,19.185551371023,19.2888201771176,24.105304010461,24.3307262994608,23.3559689349502,18.1091126591527,2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| ||
|EntrezGene=18023 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q6GTN8 | |||
|association_with_transcript=3bp_to_ENSMUST00000107657_5end | |||
|description=CAGE_peak_2_at_Nfe2l1_5end | |||
|id=chr11:96691218..96691265,- | |||
|ontology_enrichment_celltype=CL:0000221!1.33e-07!44;CL:0000133!1.33e-07!44;CL:0002319!2.11e-07!43;CL:0000055!6.75e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.33e-07,44;CL:0000133,1.33e-07,44;CL:0002319,2.11e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.01e-21!73;UBERON:0005743!9.01e-21!73;UBERON:0000073!2.02e-20!75;UBERON:0001016!2.02e-20!75;UBERON:0004121!9.51e-18!102;UBERON:0000924!9.51e-18!102;UBERON:0006601!9.51e-18!102;UBERON:0001049!1.05e-17!52;UBERON:0005068!1.05e-17!52;UBERON:0006241!1.05e-17!52;UBERON:0007135!1.05e-17!52;UBERON:0000955!1.48e-17!50;UBERON:0006238!1.48e-17!50;UBERON:0002616!3.48e-17!49;UBERON:0000033!1.40e-16!63;UBERON:0002346!2.44e-14!71;UBERON:0003075!2.44e-14!71;UBERON:0007284!2.44e-14!71;UBERON:0003080!1.13e-12!40;UBERON:0004111!2.07e-12!122;UBERON:0002780!4.06e-12!39;UBERON:0001890!4.06e-12!39;UBERON:0006240!4.06e-12!39;UBERON:0003056!1.31e-11!49;UBERON:0000025!1.00e-10!114;UBERON:0002020!8.80e-10!34;UBERON:0000468!5.35e-09!333;UBERON:0002791!5.51e-08!29;UBERON:0003528!5.51e-08!29;UBERON:0001893!5.51e-08!29;UBERON:0000922!6.49e-08!328;UBERON:0007811!6.71e-08!86;UBERON:0000480!9.66e-08!308;UBERON:0000467!9.66e-08!308;UBERON:0000062!2.97e-07!269;UBERON:0002050!3.39e-07!317;UBERON:0005423!3.39e-07!317 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.01e-21,73;UBERON:0001016,2.02e-20,75;UBERON:0000073,2.95e-19,54;UBERON:0004121,9.38e-18,95;UBERON:0000924,9.38e-18,95;UBERON:0006601,9.38e-18,95;UBERON:0001049,1.05e-17,52;UBERON:0005068,1.05e-17,52;UBERON:0006241,1.05e-17,52;UBERON:0007135,1.05e-17,52;UBERON:0010314,2.12e-16,92;UBERON:0000955,1.55e-15,47;UBERON:0006238,1.55e-15,47;UBERON:0002616,3.57e-15,46;UBERON:0002346,1.29e-14,64;UBERON:0003075,1.29e-14,64;UBERON:0007284,1.29e-14,64;UBERON:0010371,9.16e-13,73;UBERON:0003080,1.13e-12,40;UBERON:0004111,2.07e-12,122;UBERON:0002780,4.06e-12,39;UBERON:0001890,4.06e-12,39;UBERON:0006240,4.06e-12,39;UBERON:0003056,1.31e-11,49;UBERON:0000025,1.00e-10,114;UBERON:0002020,8.80e-10,34;UBERON:0003528,5.51e-08,29;UBERON:0002791,5.51e-08,29;UBERON:0001893,5.51e-08,29;UBERON:0005423,5.26e-07,304;UBERON:0000922,9.10e-07,320 | |||
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| |||
|short_description=p2@Nfe2l1 | |||
}} |
Revision as of 21:41, 12 September 2013
Short description: | p2@Nfe2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nfe2l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 3bp_to_ENSMUST00000107657_5end |
EntrezGene: | Nfe2l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.33e-07 | 44 |
neurectodermal cell | 1.33e-07 | 44 |
neural cell | 2.11e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.01e-21 | 73 |
nervous system | 2.02e-20 | 75 |
regional part of nervous system | 2.95e-19 | 54 |
ectoderm-derived structure | 9.38e-18 | 95 |
ectoderm | 9.38e-18 | 95 |
presumptive ectoderm | 9.38e-18 | 95 |
neural tube | 1.05e-17 | 52 |
neural rod | 1.05e-17 | 52 |
future spinal cord | 1.05e-17 | 52 |
neural keel | 1.05e-17 | 52 |
structure with developmental contribution from neural crest | 2.12e-16 | 92 |
brain | 1.55e-15 | 47 |
future brain | 1.55e-15 | 47 |
regional part of brain | 3.57e-15 | 46 |
neurectoderm | 1.29e-14 | 64 |
neural plate | 1.29e-14 | 64 |
presumptive neural plate | 1.29e-14 | 64 |
ecto-epithelium | 9.16e-13 | 73 |
anterior neural tube | 1.13e-12 | 40 |
anatomical conduit | 2.07e-12 | 122 |
regional part of forebrain | 4.06e-12 | 39 |
forebrain | 4.06e-12 | 39 |
future forebrain | 4.06e-12 | 39 |
pre-chordal neural plate | 1.31e-11 | 49 |
tube | 1.00e-10 | 114 |
gray matter | 8.80e-10 | 34 |
brain grey matter | 5.51e-08 | 29 |
regional part of telencephalon | 5.51e-08 | 29 |
telencephalon | 5.51e-08 | 29 |
developing anatomical structure | 5.26e-07 | 304 |
embryo | 9.10e-07 | 320 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.