FFCP PHASE1:Mm9::chr14:54813895..54813913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=291|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:54813895..54813913,+|id=chr14:54813895..54813913,+|ontology_enrichment_celltype=CL:0000791!7.44e-25!9;CL:0000789!7.44e-25!9;CL:0002420!7.44e-25!9;CL:0002419!7.44e-25!9;CL:0000790!7.44e-25!9;CL:0000624!3.36e-22!8;CL:0000084!5.23e-20!11;CL:0000827!5.23e-20!11;CL:0000838!3.44e-18!12;CL:0000893!6.41e-17!6;CL:0002489!6.41e-17!6;CL:0000898!6.41e-17!6;CL:0000809!6.41e-17!6;CL:0000810!6.41e-17!6;CL:0000895!6.41e-17!6;CL:0000808!6.41e-17!6;CL:0000894!6.41e-17!6;CL:0000806!6.41e-17!6;CL:0000807!6.41e-17!6;CL:0000805!6.41e-17!6;CL:0002425!6.41e-17!6;CL:0002436!6.41e-17!6;CL:0002427!6.41e-17!6;CL:0002428!6.41e-17!6;CL:0002429!6.41e-17!6;CL:0002433!6.41e-17!6;CL:0002431!6.41e-17!6;CL:0002432!6.41e-17!6;CL:0000542!1.19e-16!13;CL:0000051!1.19e-16!13;CL:0000738!2.61e-12!17;CL:0002087!2.61e-12!17;CL:0002031!1.28e-11!25;CL:0000988!1.44e-08!32;CL:0002032!1.44e-08!32;CL:0000037!1.44e-08!32;CL:0000566!1.44e-08!32;CL:0000837!1.44e-08!32|ontology_enrichment_celltype_v019_2=CL:0000791,9.41e-69,9;CL:0000789,9.41e-69,9;CL:0002420,9.41e-69,9;CL:0002419,9.41e-69,9;CL:0000790,9.41e-69,9;CL:0000624,2.42e-59,8;CL:0000084,2.79e-56,11;CL:0000827,2.79e-56,11;CL:0000838,1.34e-51,12;CL:0000542,1.22e-47,13;CL:0000051,1.22e-47,13;CL:0000893,8.77e-41,6;CL:0002489,8.77e-41,6;CL:0000898,8.77e-41,6;CL:0000809,8.77e-41,6;CL:0000810,8.77e-41,6;CL:0000895,8.77e-41,6;CL:0000808,8.77e-41,6;CL:0000894,8.77e-41,6;CL:0000806,8.77e-41,6;CL:0000807,8.77e-41,6;CL:0000805,8.77e-41,6;CL:0002425,8.77e-41,6;CL:0002436,8.77e-41,6;CL:0002427,8.77e-41,6;CL:0002428,8.77e-41,6;CL:0002429,8.77e-41,6;CL:0002433,8.77e-41,6;CL:0002431,8.77e-41,6;CL:0002432,8.77e-41,6;CL:0000738,1.91e-36,17;CL:0002087,1.91e-36,17;CL:0002031,8.91e-25,25;CL:0000988,2.45e-19,32;CL:0002032,2.45e-19,32;CL:0000037,2.45e-19,32;CL:0000837,2.45e-19,32;CL:0002320,2.12e-13,46;CL:0000134,2.12e-13,46;CL:0000219,2.23e-11,54;CL:0000815,3.65e-11,1;CL:0000792,3.65e-11,1;CL:0000625,4.58e-11,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.53e-23!23;UBERON:0000974!3.53e-23!23;UBERON:0004807!3.53e-23!23;UBERON:0005058!3.53e-23!23;UBERON:0003351!3.53e-23!23;UBERON:0009113!3.53e-23!23;UBERON:0003295!3.53e-23!23;UBERON:0009722!3.53e-23!23;UBERON:0005562!3.53e-23!23;UBERON:0007690!3.53e-23!23;UBERON:0004177!1.04e-22!29;UBERON:0006562!4.54e-22!24;UBERON:0003408!4.54e-22!24;UBERON:0001557!4.54e-22!24;UBERON:0001042!4.54e-22!24;UBERON:0008814!4.54e-22!24;UBERON:0009145!4.54e-22!24;UBERON:0000072!3.10e-19!27;UBERON:0002193!1.22e-17!48;UBERON:0002390!5.03e-17!45;UBERON:0003061!5.03e-17!45;UBERON:0000063!2.99e-16!35;UBERON:0000065!3.87e-13!41;UBERON:0001004!9.69e-13!42;UBERON:0005057!3.03e-11!51;UBERON:0003081!8.27e-11!88;UBERON:0002405!1.14e-10!70;UBERON:0000064!4.89e-09!99;UBERON:0003929!9.66e-08!55;UBERON:0000490!6.58e-07!66;UBERON:0002368!7.86e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.12e-13,46;UBERON:0002370,7.86e-11,23;UBERON:0000974,7.86e-11,23;UBERON:0004807,7.86e-11,23;UBERON:0005058,7.86e-11,23;UBERON:0003351,7.86e-11,23;UBERON:0009113,7.86e-11,23;UBERON:0003295,7.86e-11,23;UBERON:0009722,7.86e-11,23;UBERON:0005562,7.86e-11,23;UBERON:0007690,7.86e-11,23;UBERON:0006562,2.19e-10,24;UBERON:0003408,2.19e-10,24;UBERON:0001557,2.19e-10,24;UBERON:0001042,2.19e-10,24;UBERON:0008814,2.19e-10,24;UBERON:0009145,2.19e-10,24;UBERON:0000072,3.03e-09,27;UBERON:0004177,1.29e-08,29;UBERON:0005057,1.29e-08,29;UBERON:0000077,3.77e-07,35;UBERON:0007811,5.93e-07,36|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,0.281577444303333,1.17032263160997,4.79410311031414,1.35612670292072,4.28001824828014,3.3219752919219,0,0,0,0.315462165358238,0.548457734422955,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,2.68875039313971,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.439100230582101,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0,0,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.228620419965,0.302478555410522,0.584747284438515,0.865906574762965,0.584384510907845,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:54813895..54813913,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=291 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:54813895..54813913,+ | |||
|id=chr14:54813895..54813913,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.44e-25!9;CL:0000789!7.44e-25!9;CL:0002420!7.44e-25!9;CL:0002419!7.44e-25!9;CL:0000790!7.44e-25!9;CL:0000624!3.36e-22!8;CL:0000084!5.23e-20!11;CL:0000827!5.23e-20!11;CL:0000838!3.44e-18!12;CL:0000893!6.41e-17!6;CL:0002489!6.41e-17!6;CL:0000898!6.41e-17!6;CL:0000809!6.41e-17!6;CL:0000810!6.41e-17!6;CL:0000895!6.41e-17!6;CL:0000808!6.41e-17!6;CL:0000894!6.41e-17!6;CL:0000806!6.41e-17!6;CL:0000807!6.41e-17!6;CL:0000805!6.41e-17!6;CL:0002425!6.41e-17!6;CL:0002436!6.41e-17!6;CL:0002427!6.41e-17!6;CL:0002428!6.41e-17!6;CL:0002429!6.41e-17!6;CL:0002433!6.41e-17!6;CL:0002431!6.41e-17!6;CL:0002432!6.41e-17!6;CL:0000542!1.19e-16!13;CL:0000051!1.19e-16!13;CL:0000738!2.61e-12!17;CL:0002087!2.61e-12!17;CL:0002031!1.28e-11!25;CL:0000988!1.44e-08!32;CL:0002032!1.44e-08!32;CL:0000037!1.44e-08!32;CL:0000566!1.44e-08!32;CL:0000837!1.44e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.41e-69,9;CL:0000789,9.41e-69,9;CL:0002420,9.41e-69,9;CL:0002419,9.41e-69,9;CL:0000790,9.41e-69,9;CL:0000624,2.42e-59,8;CL:0000084,2.79e-56,11;CL:0000827,2.79e-56,11;CL:0000838,1.34e-51,12;CL:0000542,1.22e-47,13;CL:0000051,1.22e-47,13;CL:0000893,8.77e-41,6;CL:0002489,8.77e-41,6;CL:0000898,8.77e-41,6;CL:0000809,8.77e-41,6;CL:0000810,8.77e-41,6;CL:0000895,8.77e-41,6;CL:0000808,8.77e-41,6;CL:0000894,8.77e-41,6;CL:0000806,8.77e-41,6;CL:0000807,8.77e-41,6;CL:0000805,8.77e-41,6;CL:0002425,8.77e-41,6;CL:0002436,8.77e-41,6;CL:0002427,8.77e-41,6;CL:0002428,8.77e-41,6;CL:0002429,8.77e-41,6;CL:0002433,8.77e-41,6;CL:0002431,8.77e-41,6;CL:0002432,8.77e-41,6;CL:0000738,1.91e-36,17;CL:0002087,1.91e-36,17;CL:0002031,8.91e-25,25;CL:0000988,2.45e-19,32;CL:0002032,2.45e-19,32;CL:0000037,2.45e-19,32;CL:0000837,2.45e-19,32;CL:0002320,2.12e-13,46;CL:0000134,2.12e-13,46;CL:0000219,2.23e-11,54;CL:0000815,3.65e-11,1;CL:0000792,3.65e-11,1;CL:0000625,4.58e-11,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.53e-23!23;UBERON:0000974!3.53e-23!23;UBERON:0004807!3.53e-23!23;UBERON:0005058!3.53e-23!23;UBERON:0003351!3.53e-23!23;UBERON:0009113!3.53e-23!23;UBERON:0003295!3.53e-23!23;UBERON:0009722!3.53e-23!23;UBERON:0005562!3.53e-23!23;UBERON:0007690!3.53e-23!23;UBERON:0004177!1.04e-22!29;UBERON:0006562!4.54e-22!24;UBERON:0003408!4.54e-22!24;UBERON:0001557!4.54e-22!24;UBERON:0001042!4.54e-22!24;UBERON:0008814!4.54e-22!24;UBERON:0009145!4.54e-22!24;UBERON:0000072!3.10e-19!27;UBERON:0002193!1.22e-17!48;UBERON:0002390!5.03e-17!45;UBERON:0003061!5.03e-17!45;UBERON:0000063!2.99e-16!35;UBERON:0000065!3.87e-13!41;UBERON:0001004!9.69e-13!42;UBERON:0005057!3.03e-11!51;UBERON:0003081!8.27e-11!88;UBERON:0002405!1.14e-10!70;UBERON:0000064!4.89e-09!99;UBERON:0003929!9.66e-08!55;UBERON:0000490!6.58e-07!66;UBERON:0002368!7.86e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.12e-13,46;UBERON:0002370,7.86e-11,23;UBERON:0000974,7.86e-11,23;UBERON:0004807,7.86e-11,23;UBERON:0005058,7.86e-11,23;UBERON:0003351,7.86e-11,23;UBERON:0009113,7.86e-11,23;UBERON:0003295,7.86e-11,23;UBERON:0009722,7.86e-11,23;UBERON:0005562,7.86e-11,23;UBERON:0007690,7.86e-11,23;UBERON:0006562,2.19e-10,24;UBERON:0003408,2.19e-10,24;UBERON:0001557,2.19e-10,24;UBERON:0001042,2.19e-10,24;UBERON:0008814,2.19e-10,24;UBERON:0009145,2.19e-10,24;UBERON:0000072,3.03e-09,27;UBERON:0004177,1.29e-08,29;UBERON:0005057,1.29e-08,29;UBERON:0000077,3.77e-07,35;UBERON:0007811,5.93e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,3.22808308603941,0.281577444303333,1.17032263160997,4.79410311031414,1.35612670292072,4.28001824828014,3.3219752919219,0,0,0,0.315462165358238,0.548457734422955,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,2.68875039313971,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.439100230582101,0,0,0,1.32167513193519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0,0,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.228620419965,0.302478555410522,0.584747284438515,0.865906574762965,0.584384510907845,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:54813895..54813913,+ | |||
}} |
Revision as of 02:22, 13 September 2013
Short description: | p@chr14:54813895..54813913, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54813895..54813913, + |
Coexpression cluster: | MCL_coexpression_mm9:291 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.12e-13 | 46 |
thymus | 7.86e-11 | 23 |
neck | 7.86e-11 | 23 |
respiratory system epithelium | 7.86e-11 | 23 |
hemolymphoid system gland | 7.86e-11 | 23 |
pharyngeal epithelium | 7.86e-11 | 23 |
thymic region | 7.86e-11 | 23 |
pharyngeal gland | 7.86e-11 | 23 |
entire pharyngeal arch endoderm | 7.86e-11 | 23 |
thymus primordium | 7.86e-11 | 23 |
early pharyngeal endoderm | 7.86e-11 | 23 |
pharynx | 2.19e-10 | 24 |
gland of gut | 2.19e-10 | 24 |
upper respiratory tract | 2.19e-10 | 24 |
chordate pharynx | 2.19e-10 | 24 |
pharyngeal arch system | 2.19e-10 | 24 |
pharyngeal region of foregut | 2.19e-10 | 24 |
segment of respiratory tract | 3.03e-09 | 27 |
hemopoietic organ | 1.29e-08 | 29 |
immune organ | 1.29e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.77e-07 | 35 |
craniocervical region | 5.93e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.