FFCP PHASE1:Mm9::chr15:100871466..100871484,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2947|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:100871466..100871484,+|id=chr15:100871466..100871484,+|ontology_enrichment_celltype=CL:0000117!3.05e-12!23;CL:0000337!3.05e-12!23;CL:0000540!1.85e-10!33;CL:0000047!1.85e-10!33;CL:0000031!1.85e-10!33;CL:0000404!1.85e-10!33;CL:0000393!5.02e-08!39;CL:0000211!5.02e-08!39;CL:0002319!1.46e-07!43;CL:0000221!2.86e-07!44;CL:0000133!2.86e-07!44|ontology_enrichment_celltype_v019_2=CL:0002610,4.88e-18,3;CL:0000117,2.25e-08,23;CL:0000337,2.25e-08,23;CL:0002614,3.92e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.44e-27!75;UBERON:0001016!1.44e-27!75;UBERON:0001017!2.09e-27!73;UBERON:0005743!2.09e-27!73;UBERON:0000955!4.51e-27!50;UBERON:0006238!4.51e-27!50;UBERON:0001049!6.22e-27!52;UBERON:0005068!6.22e-27!52;UBERON:0006241!6.22e-27!52;UBERON:0007135!6.22e-27!52;UBERON:0002616!5.89e-26!49;UBERON:0002346!7.23e-24!71;UBERON:0003075!7.23e-24!71;UBERON:0007284!7.23e-24!71;UBERON:0002020!1.62e-22!34;UBERON:0000033!1.69e-21!63;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0003080!4.82e-19!40;UBERON:0002791!6.69e-19!29;UBERON:0003528!6.69e-19!29;UBERON:0001893!6.69e-19!29;UBERON:0002780!4.50e-18!39;UBERON:0001890!4.50e-18!39;UBERON:0006240!4.50e-18!39;UBERON:0003056!3.42e-16!49;UBERON:0002021!6.86e-15!10;UBERON:0000411!6.86e-15!10;UBERON:0001950!6.86e-15!10;UBERON:0000956!2.77e-14!21;UBERON:0001869!2.77e-14!21;UBERON:0000203!2.77e-14!21;UBERON:0007811!1.48e-13!86;UBERON:0002619!2.31e-12!17;UBERON:0000153!1.82e-11!94;UBERON:0002298!9.35e-09!6;UBERON:0003076!1.97e-08!12;UBERON:0003057!1.97e-08!12;UBERON:0000025!4.04e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.62e-35,10;UBERON:0000411,3.62e-35,10;UBERON:0001950,3.62e-35,10;UBERON:0000073,1.55e-24,54;UBERON:0002619,2.22e-20,17;UBERON:0002020,2.24e-18,34;UBERON:0004684,4.88e-18,3;UBERON:0002275,4.88e-18,3;UBERON:0003528,4.98e-18,29;UBERON:0002791,4.98e-18,29;UBERON:0001893,4.98e-18,29;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0000956,2.41e-16,21;UBERON:0001869,2.41e-16,21;UBERON:0000203,2.41e-16,21;UBERON:0001049,3.20e-16,52;UBERON:0005068,3.20e-16,52;UBERON:0006241,3.20e-16,52;UBERON:0007135,3.20e-16,52;UBERON:0002616,9.73e-16,46;UBERON:0000955,2.27e-15,47;UBERON:0006238,2.27e-15,47;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002780,4.35e-13,39;UBERON:0001890,4.35e-13,39;UBERON:0006240,4.35e-13,39;UBERON:0002346,7.28e-13,64;UBERON:0003075,7.28e-13,64;UBERON:0007284,7.28e-13,64;UBERON:0003080,9.94e-13,40;UBERON:0010371,4.59e-11,73;UBERON:0003056,3.74e-10,49;UBERON:0010314,2.07e-08,92;UBERON:0002038,3.92e-08,3;UBERON:0009663,3.92e-08,3;UBERON:0009661,3.92e-08,3;UBERON:0000125,3.92e-08,3;UBERON:0002308,3.92e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.662605622854841,0,0.479227355091182,0,4.40463523997555,3.44755812830007,3.68655679814984,0.263772575460388,0.365950574409639,0,1.95428099300967,1.68828783009504,0.763991238884051,1.47314292736834,0.996601765593721,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0.449371918214468,0.457500602818626,0,0.869121600961382,0.767146371990992,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.820481806145422,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.71868654031819,4.98374228796694,0.685082519770642,5.2877572817279,2.02506750069542,0.900642406448441,1.81256963593682,2.5888015587591,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:100871466..100871484,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2947 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:100871466..100871484,+ | |||
|id=chr15:100871466..100871484,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.05e-12!23;CL:0000337!3.05e-12!23;CL:0000540!1.85e-10!33;CL:0000047!1.85e-10!33;CL:0000031!1.85e-10!33;CL:0000404!1.85e-10!33;CL:0000393!5.02e-08!39;CL:0000211!5.02e-08!39;CL:0002319!1.46e-07!43;CL:0000221!2.86e-07!44;CL:0000133!2.86e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.88e-18,3;CL:0000117,2.25e-08,23;CL:0000337,2.25e-08,23;CL:0002614,3.92e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.44e-27!75;UBERON:0001016!1.44e-27!75;UBERON:0001017!2.09e-27!73;UBERON:0005743!2.09e-27!73;UBERON:0000955!4.51e-27!50;UBERON:0006238!4.51e-27!50;UBERON:0001049!6.22e-27!52;UBERON:0005068!6.22e-27!52;UBERON:0006241!6.22e-27!52;UBERON:0007135!6.22e-27!52;UBERON:0002616!5.89e-26!49;UBERON:0002346!7.23e-24!71;UBERON:0003075!7.23e-24!71;UBERON:0007284!7.23e-24!71;UBERON:0002020!1.62e-22!34;UBERON:0000033!1.69e-21!63;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0003080!4.82e-19!40;UBERON:0002791!6.69e-19!29;UBERON:0003528!6.69e-19!29;UBERON:0001893!6.69e-19!29;UBERON:0002780!4.50e-18!39;UBERON:0001890!4.50e-18!39;UBERON:0006240!4.50e-18!39;UBERON:0003056!3.42e-16!49;UBERON:0002021!6.86e-15!10;UBERON:0000411!6.86e-15!10;UBERON:0001950!6.86e-15!10;UBERON:0000956!2.77e-14!21;UBERON:0001869!2.77e-14!21;UBERON:0000203!2.77e-14!21;UBERON:0007811!1.48e-13!86;UBERON:0002619!2.31e-12!17;UBERON:0000153!1.82e-11!94;UBERON:0002298!9.35e-09!6;UBERON:0003076!1.97e-08!12;UBERON:0003057!1.97e-08!12;UBERON:0000025!4.04e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.62e-35,10;UBERON:0000411,3.62e-35,10;UBERON:0001950,3.62e-35,10;UBERON:0000073,1.55e-24,54;UBERON:0002619,2.22e-20,17;UBERON:0002020,2.24e-18,34;UBERON:0004684,4.88e-18,3;UBERON:0002275,4.88e-18,3;UBERON:0003528,4.98e-18,29;UBERON:0002791,4.98e-18,29;UBERON:0001893,4.98e-18,29;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0000956,2.41e-16,21;UBERON:0001869,2.41e-16,21;UBERON:0000203,2.41e-16,21;UBERON:0001049,3.20e-16,52;UBERON:0005068,3.20e-16,52;UBERON:0006241,3.20e-16,52;UBERON:0007135,3.20e-16,52;UBERON:0002616,9.73e-16,46;UBERON:0000955,2.27e-15,47;UBERON:0006238,2.27e-15,47;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002780,4.35e-13,39;UBERON:0001890,4.35e-13,39;UBERON:0006240,4.35e-13,39;UBERON:0002346,7.28e-13,64;UBERON:0003075,7.28e-13,64;UBERON:0007284,7.28e-13,64;UBERON:0003080,9.94e-13,40;UBERON:0010371,4.59e-11,73;UBERON:0003056,3.74e-10,49;UBERON:0010314,2.07e-08,92;UBERON:0002038,3.92e-08,3;UBERON:0009663,3.92e-08,3;UBERON:0009661,3.92e-08,3;UBERON:0000125,3.92e-08,3;UBERON:0002308,3.92e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.662605622854841,0,0.479227355091182,0,4.40463523997555,3.44755812830007,3.68655679814984,0.263772575460388,0.365950574409639,0,1.95428099300967,1.68828783009504,0.763991238884051,1.47314292736834,0.996601765593721,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0.449371918214468,0.457500602818626,0,0.869121600961382,0.767146371990992,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.820481806145422,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.71868654031819,4.98374228796694,0.685082519770642,5.2877572817279,2.02506750069542,0.900642406448441,1.81256963593682,2.5888015587591,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:100871466..100871484,+ | |||
}} |
Revision as of 03:20, 13 September 2013
Short description: | p@chr15:100871466..100871484, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:100871466..100871484, + |
Coexpression cluster: | MCL_coexpression_mm9:2947 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.88e-18 | 3 |
CNS neuron (sensu Vertebrata) | 2.25e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.25e-08 | 23 |
neuron of the substantia nigra | 3.92e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.