FFCP PHASE1:Hg19::chr4:38807210..38807271,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7096|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11847|TSSclassifier=S|UniProt=D6RF68|association_with_transcript=-11bp_to_ENST00000508364_5end|coexpression_cluster_id=C2|description=CAGE_peak_3_at_TLR1_5end|id=chr4:38807210..38807271,-|ontology_enrichment_celltype=CL:0000738!1.40e-39!140;CL:0000766!1.99e-36!76;CL:0002087!4.22e-34!119;CL:0000037!2.37e-33!172;CL:0000566!2.37e-33!172;CL:0002032!1.12e-32!165;CL:0000837!1.12e-32!165;CL:0000988!1.14e-32!182;CL:0002009!1.32e-32!65;CL:0002031!2.42e-32!124;CL:0002057!1.70e-31!42;CL:0002194!1.74e-31!63;CL:0000576!1.74e-31!63;CL:0000040!1.74e-31!63;CL:0000559!1.74e-31!63;CL:0000557!1.99e-30!71;CL:0000839!1.68e-28!70;CL:0000763!5.48e-28!112;CL:0000049!5.48e-28!112;CL:0000860!6.81e-28!45;CL:0000945!1.34e-10!24;CL:0000826!1.34e-10!24;CL:0000134!1.72e-08!358;CL:0000094!9.18e-08!8;CL:0002320!1.46e-07!365;CL:0000081!1.99e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.25e-49;33!CL:0002057;1.25e-49;33!CL:0000473;5.15e-49;39!CL:0000234;5.15e-49;39!CL:0000576;4.43e-39;48!CL:0000766;8.65e-31;69!CL:0000763;2.93e-17;100!CL:0002087;7.55e-17;104!CL:0000094;1.00e-14;8!CL:0000738;3.48e-14;136!CL:0000081;7.54e-13;11!CL:0000945;4.50e-12;24!CL:0000988;6.26e-11;177!CL:0000235;1.85e-10;6!CL:0000775;3.27e-07;3!CL:0000219;9.58e-07;193|ontology_enrichment_celltype_v019_2=CL:0000473,1.79e-72,48;CL:0000234,1.79e-72,48;CL:0000766,4.37e-70,72;CL:0000738,2.41e-65,136;CL:0000860,3.67e-63,42;CL:0002057,3.67e-63,42;CL:0002009,4.44e-63,61;CL:0002194,6.71e-63,59;CL:0000576,6.71e-63,59;CL:0000040,6.71e-63,59;CL:0000559,6.71e-63,59;CL:0002087,1.83e-58,115;CL:0000557,5.13e-56,67;CL:0000839,1.38e-54,66;CL:0000988,1.51e-53,177;CL:0000037,1.09e-52,168;CL:0002031,8.12e-52,120;CL:0002032,6.19e-50,161;CL:0000837,6.19e-50,161;CL:0000763,3.07e-47,108;CL:0000049,3.07e-47,108;CL:0000094,7.73e-15,8;CL:0000134,8.67e-15,354;CL:0002320,4.53e-14,361;CL:0000081,5.93e-13,11;CL:0000945,3.73e-12,24;CL:0000826,3.73e-12,24;CL:0000219,1.43e-11,386;CL:0000048,1.86e-11,427;CL:0000723,5.55e-11,433;CL:0000034,2.25e-10,441;CL:0000235,2.36e-10,6;CL:0002393,3.39e-10,9;CL:0002397,3.39e-10,9;CL:0000775,3.29e-07,3|ontology_enrichment_development_v019=CL:0002057;1.63e-44;42!CL:0000049;8.50e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.88e-37!102;UBERON:0003061!5.88e-37!102;UBERON:0002193!6.61e-35!112;UBERON:0002371!3.19e-27!80;UBERON:0001474!2.62e-23!86;UBERON:0007023!2.00e-20!115;UBERON:0003081!6.49e-20!216;UBERON:0004765!6.20e-19!101;UBERON:0001434!6.20e-19!101;UBERON:0002405!7.82e-19!115;UBERON:0000178!3.29e-10!15;UBERON:0000179!3.29e-10!15;UBERON:0000463!3.29e-10!15;UBERON:0002204!4.42e-10!167;UBERON:0000479!2.82e-08!787;UBERON:0001049!2.20e-07!57;UBERON:0005068!2.20e-07!57;UBERON:0006241!2.20e-07!57;UBERON:0007135!2.20e-07!57;UBERON:0002384!4.88e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;7.74e-21;15!UBERON:0000179;7.74e-21;15!UBERON:0000463;7.74e-21;15!UBERON:0002390;8.76e-12;32!UBERON:0002193;6.77e-09;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.40e-68,98;UBERON:0003061,4.40e-68,98;UBERON:0002193,4.86e-66,108;UBERON:0002371,6.77e-50,76;UBERON:0002405,3.85e-47,93;UBERON:0001474,4.62e-45,82;UBERON:0004765,1.27e-39,90;UBERON:0001434,4.65e-34,100;UBERON:0003081,4.64e-31,203;UBERON:0000178,7.42e-21,15;UBERON:0000179,7.42e-21,15;UBERON:0000463,7.42e-21,15;UBERON:0002204,2.02e-17,167;UBERON:0000926,4.01e-15,315;UBERON:0004120,4.01e-15,315;UBERON:0006603,4.01e-15,315;UBERON:0002384,1.00e-13,371|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,9.62808912424186,9.52366837619371,8.7368967258184,1.96682138424452,4.60595277716655,2.16742572642506,0,0.30120591877825,0,1.08454080812422,1.56386155736164,0,2.76997704265939,1.60435557976113,0.868043482863407,3.35873211359887,2.59114932815184,3.09090681161024,13.0858414901608,8.69114670484262,11.1588668146395,9.76201955003875,5.34518254428373,6.50383378879718,5.46615545412086,6.66017836975662,13.7159693335379,4.48169384957604,4.51839278508678,8.12558919566051,7.9061782607894,7.64137220161968,12.8092386133698,9.18251677112708,9.62787081228281,7.67204550958849,16.8224163095225,15.5581652944873,21.7374622771674,2.90209238628584,2.8369261234557,3.73693349397345,5.27622197039161,5.73631210262222,10.8594422352558,1.21079900526674,4.78760926783834,6.0127853613768,1.47878700418359,2.33864729961548,1.46761051855863,3.59451619668784,2.10247649978109,3.05378614724452,2.56511469367124,2.78483348078726,2.73996230646951,0,0.546138611262131,1.77901850772711,1.70692089026603,0.400395987036012,1.72425731986345,0,0.954053754535364,3.41527781465669,1.76171156811282,3.05818582500183,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.15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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11847 | |||
|TSSclassifier=S | |||
|UniProt=D6RF68 | |||
|association_with_transcript=-11bp_to_ENST00000508364_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_TLR1_5end | |||
|id=chr4:38807210..38807271,- | |||
|ontology_enrichment_celltype=CL:0000738!1.40e-39!140;CL:0000766!1.99e-36!76;CL:0002087!4.22e-34!119;CL:0000037!2.37e-33!172;CL:0000566!2.37e-33!172;CL:0002032!1.12e-32!165;CL:0000837!1.12e-32!165;CL:0000988!1.14e-32!182;CL:0002009!1.32e-32!65;CL:0002031!2.42e-32!124;CL:0002057!1.70e-31!42;CL:0002194!1.74e-31!63;CL:0000576!1.74e-31!63;CL:0000040!1.74e-31!63;CL:0000559!1.74e-31!63;CL:0000557!1.99e-30!71;CL:0000839!1.68e-28!70;CL:0000763!5.48e-28!112;CL:0000049!5.48e-28!112;CL:0000860!6.81e-28!45;CL:0000945!1.34e-10!24;CL:0000826!1.34e-10!24;CL:0000134!1.72e-08!358;CL:0000094!9.18e-08!8;CL:0002320!1.46e-07!365;CL:0000081!1.99e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-49;33!CL:0002057;1.25e-49;33!CL:0000473;5.15e-49;39!CL:0000234;5.15e-49;39!CL:0000576;4.43e-39;48!CL:0000766;8.65e-31;69!CL:0000763;2.93e-17;100!CL:0002087;7.55e-17;104!CL:0000094;1.00e-14;8!CL:0000738;3.48e-14;136!CL:0000081;7.54e-13;11!CL:0000945;4.50e-12;24!CL:0000988;6.26e-11;177!CL:0000235;1.85e-10;6!CL:0000775;3.27e-07;3!CL:0000219;9.58e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.79e-72,48;CL:0000234,1.79e-72,48;CL:0000766,4.37e-70,72;CL:0000738,2.41e-65,136;CL:0000860,3.67e-63,42;CL:0002057,3.67e-63,42;CL:0002009,4.44e-63,61;CL:0002194,6.71e-63,59;CL:0000576,6.71e-63,59;CL:0000040,6.71e-63,59;CL:0000559,6.71e-63,59;CL:0002087,1.83e-58,115;CL:0000557,5.13e-56,67;CL:0000839,1.38e-54,66;CL:0000988,1.51e-53,177;CL:0000037,1.09e-52,168;CL:0002031,8.12e-52,120;CL:0002032,6.19e-50,161;CL:0000837,6.19e-50,161;CL:0000763,3.07e-47,108;CL:0000049,3.07e-47,108;CL:0000094,7.73e-15,8;CL:0000134,8.67e-15,354;CL:0002320,4.53e-14,361;CL:0000081,5.93e-13,11;CL:0000945,3.73e-12,24;CL:0000826,3.73e-12,24;CL:0000219,1.43e-11,386;CL:0000048,1.86e-11,427;CL:0000723,5.55e-11,433;CL:0000034,2.25e-10,441;CL:0000235,2.36e-10,6;CL:0002393,3.39e-10,9;CL:0002397,3.39e-10,9;CL:0000775,3.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-44;42!CL:0000049;8.50e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.88e-37!102;UBERON:0003061!5.88e-37!102;UBERON:0002193!6.61e-35!112;UBERON:0002371!3.19e-27!80;UBERON:0001474!2.62e-23!86;UBERON:0007023!2.00e-20!115;UBERON:0003081!6.49e-20!216;UBERON:0004765!6.20e-19!101;UBERON:0001434!6.20e-19!101;UBERON:0002405!7.82e-19!115;UBERON:0000178!3.29e-10!15;UBERON:0000179!3.29e-10!15;UBERON:0000463!3.29e-10!15;UBERON:0002204!4.42e-10!167;UBERON:0000479!2.82e-08!787;UBERON:0001049!2.20e-07!57;UBERON:0005068!2.20e-07!57;UBERON:0006241!2.20e-07!57;UBERON:0007135!2.20e-07!57;UBERON:0002384!4.88e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.74e-21;15!UBERON:0000179;7.74e-21;15!UBERON:0000463;7.74e-21;15!UBERON:0002390;8.76e-12;32!UBERON:0002193;6.77e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.40e-68,98;UBERON:0003061,4.40e-68,98;UBERON:0002193,4.86e-66,108;UBERON:0002371,6.77e-50,76;UBERON:0002405,3.85e-47,93;UBERON:0001474,4.62e-45,82;UBERON:0004765,1.27e-39,90;UBERON:0001434,4.65e-34,100;UBERON:0003081,4.64e-31,203;UBERON:0000178,7.42e-21,15;UBERON:0000179,7.42e-21,15;UBERON:0000463,7.42e-21,15;UBERON:0002204,2.02e-17,167;UBERON:0000926,4.01e-15,315;UBERON:0004120,4.01e-15,315;UBERON:0006603,4.01e-15,315;UBERON:0002384,1.00e-13,371 | |||
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| |||
|short_description=p3@TLR1 | |||
}} |
Revision as of 10:48, 13 September 2013
Short description: | p3@TLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TLR1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -11bp_to_ENST00000508364_5end |
EntrezGene: | TLR1 |
HGNC: | 11847 |
UniProt: | D6RF68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.40e-68 | 98 |
blood island | 4.40e-68 | 98 |
hemolymphoid system | 4.86e-66 | 108 |
bone marrow | 6.77e-50 | 76 |
immune system | 3.85e-47 | 93 |
bone element | 4.62e-45 | 82 |
skeletal element | 1.27e-39 | 90 |
skeletal system | 4.65e-34 | 100 |
lateral plate mesoderm | 4.64e-31 | 203 |
blood | 7.42e-21 | 15 |
haemolymphatic fluid | 7.42e-21 | 15 |
organism substance | 7.42e-21 | 15 |
musculoskeletal system | 2.02e-17 | 167 |
mesoderm | 4.01e-15 | 315 |
mesoderm-derived structure | 4.01e-15 | 315 |
presumptive mesoderm | 4.01e-15 | 315 |
connective tissue | 1.00e-13 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.