FFCP PHASE1:Hg19::chr5:81149007..81149026,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:81149007..81149026,+ | |||
|id=chr5:81149007..81149026,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.82e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;3.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.25e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.15e-25!57;UBERON:0005068!3.15e-25!57;UBERON:0006241!3.15e-25!57;UBERON:0007135!3.15e-25!57;UBERON:0002616!5.17e-22!59;UBERON:0002308!1.05e-21!9;UBERON:0000125!1.05e-21!9;UBERON:0007023!3.16e-21!115;UBERON:0000073!1.02e-19!94;UBERON:0001016!1.02e-19!94;UBERON:0000955!2.21e-19!69;UBERON:0006238!2.21e-19!69;UBERON:0002298!1.13e-18!8;UBERON:0005743!2.00e-17!86;UBERON:0001017!5.95e-17!82;UBERON:0004733!2.39e-16!12;UBERON:0002028!2.39e-16!12;UBERON:0007277!2.39e-16!12;UBERON:0003075!3.27e-16!86;UBERON:0007284!3.27e-16!86;UBERON:0003076!4.89e-16!15;UBERON:0003057!4.89e-16!15;UBERON:0009663!9.84e-16!7;UBERON:0002346!3.22e-15!90;UBERON:0004732!5.62e-15!13;UBERON:0002780!3.73e-13!41;UBERON:0001890!3.73e-13!41;UBERON:0006240!3.73e-13!41;UBERON:0000369!7.17e-13!4;UBERON:0002435!7.17e-13!4;UBERON:0000204!7.17e-13!4;UBERON:0010082!7.17e-13!4;UBERON:0000153!7.65e-13!129;UBERON:0007811!7.65e-13!129;UBERON:0003080!9.12e-13!42;UBERON:0002420!4.38e-12!9;UBERON:0007245!4.38e-12!9;UBERON:0010009!4.38e-12!9;UBERON:0010011!4.38e-12!9;UBERON:0000454!4.38e-12!9;UBERON:0000033!2.24e-11!123;UBERON:0006331!1.92e-10!3;UBERON:0001896!2.40e-10!3;UBERON:0005290!2.40e-10!3;UBERON:0010096!2.40e-10!3;UBERON:0005383!2.64e-10!3;UBERON:0005382!2.64e-10!3;UBERON:0000988!2.82e-10!3;UBERON:0004121!1.14e-09!169;UBERON:0000924!2.78e-09!173;UBERON:0006601!2.78e-09!173;UBERON:0002680!4.50e-09!9;UBERON:0001895!4.50e-09!9;UBERON:0010092!4.50e-09!9;UBERON:0003056!4.94e-09!61;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0001893!2.37e-08!34;UBERON:0002148!7.60e-08!2;UBERON:0009662!7.60e-08!2;UBERON:0001894!1.02e-07!7;UBERON:0006222!1.02e-07!7;UBERON:0001897!1.72e-07!2;UBERON:0001873!2.61e-07!2;UBERON:0010122!2.61e-07!2;UBERON:0002791!3.51e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.82e-37;2!UBERON:0005058;6.82e-37;2!UBERON:0009113;6.82e-37;2!UBERON:0004177;2.02e-15;5!UBERON:0005057;2.02e-15;5!UBERON:0004733;3.30e-14;12!UBERON:0002028;3.30e-14;12!UBERON:0004732;3.63e-13;13!UBERON:0002298;6.50e-13;6!UBERON:0002148;2.72e-10;2!UBERON:0006331;2.72e-10;2!UBERON:0009662;2.72e-10;2!UBERON:0002680;4.80e-09;9!UBERON:0001895;4.80e-09;9!UBERON:0000988;2.79e-07;3!UBERON:0001896;2.79e-07;3!UBERON:0005290;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.70e-19,4;UBERON:0005058,4.70e-19,4;UBERON:0009113,4.70e-19,4;UBERON:0003295,4.70e-19,4;UBERON:0005562,4.70e-19,4;UBERON:0004733,3.30e-14,12;UBERON:0002028,3.30e-14,12;UBERON:0007277,3.30e-14,12;UBERON:0004732,3.63e-13,13;UBERON:0003351,4.81e-13,6;UBERON:0002298,6.50e-13,6;UBERON:0003076,1.70e-11,15;UBERON:0003057,1.70e-11,15;UBERON:0004177,2.55e-11,7;UBERON:0005057,2.55e-11,7;UBERON:0002148,3.27e-10,2;UBERON:0006331,3.27e-10,2;UBERON:0009662,3.27e-10,2;UBERON:0002680,5.20e-09,9;UBERON:0001895,5.20e-09,9;UBERON:0010092,5.20e-09,9;UBERON:0000974,3.37e-08,10;UBERON:0003408,3.37e-08,10;UBERON:0001042,3.37e-08,10;UBERON:0009145,3.37e-08,10;UBERON:0006562,1.56e-07,11;UBERON:0009722,1.56e-07,11;UBERON:0007690,1.56e-07,11;UBERON:0001896,2.47e-07,3;UBERON:0005290,2.47e-07,3;UBERON:0010096,2.47e-07,3;UBERON:0000988,3.16e-07,3 | |||
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|short_description=p@chr5:81149007..81149026,+ | |||
}} |
Revision as of 16:40, 13 September 2013
Short description: | p@chr5:81149007..81149026, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:81149007..81149026, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.70e-19 | 4 |
hemolymphoid system gland | 4.70e-19 | 4 |
thymic region | 4.70e-19 | 4 |
pharyngeal gland | 4.70e-19 | 4 |
thymus primordium | 4.70e-19 | 4 |
segmental subdivision of hindbrain | 3.30e-14 | 12 |
hindbrain | 3.30e-14 | 12 |
presumptive hindbrain | 3.30e-14 | 12 |
segmental subdivision of nervous system | 3.63e-13 | 13 |
pharyngeal epithelium | 4.81e-13 | 6 |
brainstem | 6.50e-13 | 6 |
posterior neural tube | 1.70e-11 | 15 |
chordal neural plate | 1.70e-11 | 15 |
hemopoietic organ | 2.55e-11 | 7 |
immune organ | 2.55e-11 | 7 |
locus ceruleus | 3.27e-10 | 2 |
brainstem nucleus | 3.27e-10 | 2 |
hindbrain nucleus | 3.27e-10 | 2 |
regional part of metencephalon | 5.20e-09 | 9 |
metencephalon | 5.20e-09 | 9 |
future metencephalon | 5.20e-09 | 9 |
neck | 3.37e-08 | 10 |
gland of gut | 3.37e-08 | 10 |
chordate pharynx | 3.37e-08 | 10 |
pharyngeal region of foregut | 3.37e-08 | 10 |
pharynx | 1.56e-07 | 11 |
entire pharyngeal arch endoderm | 1.56e-07 | 11 |
early pharyngeal endoderm | 1.56e-07 | 11 |
medulla oblongata | 2.47e-07 | 3 |
myelencephalon | 2.47e-07 | 3 |
future myelencephalon | 2.47e-07 | 3 |
pons | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.25e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.