FFCP PHASE1:Mm9::chr1:137270004..137270032,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77552|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000159918_5end|description=CAGE_peak_5_at_Shisa4_5end|id=chr1:137270004..137270032,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.31e-21!63;UBERON:0003056!8.57e-21!49;UBERON:0002346!1.04e-19!71;UBERON:0003075!1.04e-19!71;UBERON:0007284!1.04e-19!71;UBERON:0007811!2.70e-18!86;UBERON:0000153!3.58e-18!94;UBERON:0001049!6.51e-17!52;UBERON:0005068!6.51e-17!52;UBERON:0006241!6.51e-17!52;UBERON:0007135!6.51e-17!52;UBERON:0000955!5.64e-16!50;UBERON:0006238!5.64e-16!50;UBERON:0002616!2.89e-15!49;UBERON:0003080!1.91e-14!40;UBERON:0002780!9.21e-14!39;UBERON:0001890!9.21e-14!39;UBERON:0006240!9.21e-14!39;UBERON:0004121!5.11e-13!102;UBERON:0000924!5.11e-13!102;UBERON:0006601!5.11e-13!102;UBERON:0001017!6.63e-12!73;UBERON:0005743!6.63e-12!73;UBERON:0002020!2.22e-11!34;UBERON:0000073!4.26e-11!75;UBERON:0001016!4.26e-11!75;UBERON:0002791!1.97e-10!29;UBERON:0003528!1.97e-10!29;UBERON:0001893!1.97e-10!29;UBERON:0000956!1.78e-09!21;UBERON:0001869!1.78e-09!21;UBERON:0000203!1.78e-09!21;UBERON:0002021!6.25e-09!10;UBERON:0000411!6.25e-09!10;UBERON:0001950!6.25e-09!10;UBERON:0002619!5.81e-08!17;UBERON:0000970!1.06e-07!9;UBERON:0000019!1.06e-07!9;UBERON:0000047!1.06e-07!9;UBERON:0004088!1.06e-07!9;UBERON:0002104!1.06e-07!9;UBERON:0001456!1.06e-07!9;UBERON:0003072!1.06e-07!9;UBERON:0003071!1.06e-07!9;UBERON:0004128!1.06e-07!9;UBERON:0000020!8.36e-07!12;UBERON:0001032!8.36e-07!12;UBERON:0004456!8.36e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.42e-25,49;UBERON:0002346,2.43e-22,64;UBERON:0003075,2.43e-22,64;UBERON:0007284,2.43e-22,64;UBERON:0002021,1.23e-18,10;UBERON:0000411,1.23e-18,10;UBERON:0001950,1.23e-18,10;UBERON:0010371,1.42e-18,73;UBERON:0000955,3.39e-18,47;UBERON:0006238,3.39e-18,47;UBERON:0002616,6.74e-17,46;UBERON:0003080,3.55e-15,40;UBERON:0002619,6.90e-15,17;UBERON:0004121,1.24e-14,95;UBERON:0000924,1.24e-14,95;UBERON:0006601,1.24e-14,95;UBERON:0001049,3.08e-14,52;UBERON:0005068,3.08e-14,52;UBERON:0006241,3.08e-14,52;UBERON:0007135,3.08e-14,52;UBERON:0002780,5.79e-14,39;UBERON:0001890,5.79e-14,39;UBERON:0006240,5.79e-14,39;UBERON:0000956,9.07e-14,21;UBERON:0001869,9.07e-14,21;UBERON:0000203,9.07e-14,21;UBERON:0000073,1.74e-13,54;UBERON:0000970,3.06e-13,9;UBERON:0000019,3.06e-13,9;UBERON:0000047,3.06e-13,9;UBERON:0010312,3.06e-13,9;UBERON:0004088,3.06e-13,9;UBERON:0002104,3.06e-13,9;UBERON:0001456,3.06e-13,9;UBERON:0003072,3.06e-13,9;UBERON:0004128,3.06e-13,9;UBERON:0003071,3.06e-13,9;UBERON:0010314,4.56e-13,92;UBERON:0003528,1.67e-12,29;UBERON:0002791,1.67e-12,29;UBERON:0001893,1.67e-12,29;UBERON:0001444,1.55e-10,11;UBERON:0001017,1.91e-10,73;UBERON:0002020,4.33e-10,34;UBERON:0001016,5.36e-10,75;UBERON:0000020,1.59e-09,12;UBERON:0001032,1.59e-09,12;UBERON:0004456,1.59e-09,12;UBERON:0000033,1.14e-08,13;UBERON:0005085,1.14e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.675029691658453,0.210324961351382,0.856952953211411,0.441737081903227,0.489963196859816,0.575072826109418,0,0,0.383062014255563,0.46081959976873,0.791317726381163,0.365950574409639,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,3.59497534571574,2.28750301409313,9.42407640846483,7.47444576826789,3.83573185995496,2.0778804455956,2.92034273521964,0,0,0,3.99839526184301,0.650602214813519,1.14951052216736,2.16074555766419,2.41127708537144,4.49040894398764,7.04625461566674,6.27801554550183,12.9351685369508,0.215567992932842,0.189106080167819,0,0.43839146485515,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,5.04232600658494,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.87538698547525,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,4.17717711348349,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,1.95074257006501,1.42695054081656,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,0.15816799679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| ||
|EntrezGene=77552 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000159918_5end | |||
|description=CAGE_peak_5_at_Shisa4_5end | |||
|id=chr1:137270004..137270032,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.31e-21!63;UBERON:0003056!8.57e-21!49;UBERON:0002346!1.04e-19!71;UBERON:0003075!1.04e-19!71;UBERON:0007284!1.04e-19!71;UBERON:0007811!2.70e-18!86;UBERON:0000153!3.58e-18!94;UBERON:0001049!6.51e-17!52;UBERON:0005068!6.51e-17!52;UBERON:0006241!6.51e-17!52;UBERON:0007135!6.51e-17!52;UBERON:0000955!5.64e-16!50;UBERON:0006238!5.64e-16!50;UBERON:0002616!2.89e-15!49;UBERON:0003080!1.91e-14!40;UBERON:0002780!9.21e-14!39;UBERON:0001890!9.21e-14!39;UBERON:0006240!9.21e-14!39;UBERON:0004121!5.11e-13!102;UBERON:0000924!5.11e-13!102;UBERON:0006601!5.11e-13!102;UBERON:0001017!6.63e-12!73;UBERON:0005743!6.63e-12!73;UBERON:0002020!2.22e-11!34;UBERON:0000073!4.26e-11!75;UBERON:0001016!4.26e-11!75;UBERON:0002791!1.97e-10!29;UBERON:0003528!1.97e-10!29;UBERON:0001893!1.97e-10!29;UBERON:0000956!1.78e-09!21;UBERON:0001869!1.78e-09!21;UBERON:0000203!1.78e-09!21;UBERON:0002021!6.25e-09!10;UBERON:0000411!6.25e-09!10;UBERON:0001950!6.25e-09!10;UBERON:0002619!5.81e-08!17;UBERON:0000970!1.06e-07!9;UBERON:0000019!1.06e-07!9;UBERON:0000047!1.06e-07!9;UBERON:0004088!1.06e-07!9;UBERON:0002104!1.06e-07!9;UBERON:0001456!1.06e-07!9;UBERON:0003072!1.06e-07!9;UBERON:0003071!1.06e-07!9;UBERON:0004128!1.06e-07!9;UBERON:0000020!8.36e-07!12;UBERON:0001032!8.36e-07!12;UBERON:0004456!8.36e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.42e-25,49;UBERON:0002346,2.43e-22,64;UBERON:0003075,2.43e-22,64;UBERON:0007284,2.43e-22,64;UBERON:0002021,1.23e-18,10;UBERON:0000411,1.23e-18,10;UBERON:0001950,1.23e-18,10;UBERON:0010371,1.42e-18,73;UBERON:0000955,3.39e-18,47;UBERON:0006238,3.39e-18,47;UBERON:0002616,6.74e-17,46;UBERON:0003080,3.55e-15,40;UBERON:0002619,6.90e-15,17;UBERON:0004121,1.24e-14,95;UBERON:0000924,1.24e-14,95;UBERON:0006601,1.24e-14,95;UBERON:0001049,3.08e-14,52;UBERON:0005068,3.08e-14,52;UBERON:0006241,3.08e-14,52;UBERON:0007135,3.08e-14,52;UBERON:0002780,5.79e-14,39;UBERON:0001890,5.79e-14,39;UBERON:0006240,5.79e-14,39;UBERON:0000956,9.07e-14,21;UBERON:0001869,9.07e-14,21;UBERON:0000203,9.07e-14,21;UBERON:0000073,1.74e-13,54;UBERON:0000970,3.06e-13,9;UBERON:0000019,3.06e-13,9;UBERON:0000047,3.06e-13,9;UBERON:0010312,3.06e-13,9;UBERON:0004088,3.06e-13,9;UBERON:0002104,3.06e-13,9;UBERON:0001456,3.06e-13,9;UBERON:0003072,3.06e-13,9;UBERON:0004128,3.06e-13,9;UBERON:0003071,3.06e-13,9;UBERON:0010314,4.56e-13,92;UBERON:0003528,1.67e-12,29;UBERON:0002791,1.67e-12,29;UBERON:0001893,1.67e-12,29;UBERON:0001444,1.55e-10,11;UBERON:0001017,1.91e-10,73;UBERON:0002020,4.33e-10,34;UBERON:0001016,5.36e-10,75;UBERON:0000020,1.59e-09,12;UBERON:0001032,1.59e-09,12;UBERON:0004456,1.59e-09,12;UBERON:0000033,1.14e-08,13;UBERON:0005085,1.14e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.675029691658453,0.210324961351382,0.856952953211411,0.441737081903227,0.489963196859816,0.575072826109418,0,0,0.383062014255563,0.46081959976873,0.791317726381163,0.365950574409639,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,3.59497534571574,2.28750301409313,9.42407640846483,7.47444576826789,3.83573185995496,2.0778804455956,2.92034273521964,0,0,0,3.99839526184301,0.650602214813519,1.14951052216736,2.16074555766419,2.41127708537144,4.49040894398764,7.04625461566674,6.27801554550183,12.9351685369508,0.215567992932842,0.189106080167819,0,0.43839146485515,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,5.04232600658494,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.87538698547525,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,4.17717711348349,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,1.95074257006501,1.42695054081656,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0.308132871494482,1.16928740680016,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.504832249740738,0.381034033274999,0.302478555410522,0.194915761479505,0.0962118416403295,0.467507608726276,0.226730383615211,0,0,0,0,0,0.183151624267265,0,1.50471631210609,1.12950368523413,6.44455331110048,5.15605962095457,4.98374228796694,9.59115527678899,1.5107877947794,4.72515750162264,4.5032120322422,4.53142408984205,3.62432218226274,0.518936737920883,1.19707462020309,1.53660245178721,1.45864030240976,2.09613162627982,1.65459157605013,1.11123363900808,1.03017528619447,0.64183841918363,0.505394423527595,0.760437899670719,0.943131706930381,0.749132059759059,1.21647789569252,0.746661096422973,1.90517476513229,0.115884325944855,0.77163688185482,1.23625770240992,0.294397840268795,0.685738504770831,0.70990322463735,0.715308569841963,1.16277133305863,0.658765662907314,0.930760686808441,0.548783918618318,1.31534855718921,0.543216455383447,0,0.711810108745045,0.788035859004508,0.409231043169689,0.619747364743864,0.771626443924566,3.99696924700713,0.701794825336225,1.28922632428979,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Shisa4 | |||
}} |
Revision as of 19:00, 13 September 2013
Short description: | p5@Shisa4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Shisa4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000159918_5end |
EntrezGene: | Shisa4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.