FFCP PHASE1:Hg19::chr6:169563046..169563081,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-27bp_to_ENST00000439703_5end|description=CAGE_peak_3_at_ENST00000439703_5end|id=chr6:169563046..169563081,-|ontology_enrichment_celltype=CL:0000055!5.37e-29!180;CL:0000057!2.09e-23!75;CL:0000048!1.77e-15!430;CL:0000723!6.99e-15!436;CL:0000680!7.37e-15!57;CL:0000056!7.37e-15!57;CL:0000355!7.37e-15!57;CL:0000222!2.73e-14!119;CL:0000548!3.78e-14!679;CL:0000004!3.78e-14!679;CL:0000255!3.78e-14!679;CL:0000187!5.75e-14!54;CL:0000144!8.98e-14!625;CL:0000012!1.15e-13!682;CL:0000034!1.68e-13!444;CL:0002371!2.22e-12!591;CL:0000183!6.04e-12!59;CL:0002620!1.11e-11!23;CL:0000359!3.64e-11!32;CL:0000393!5.81e-11!60;CL:0000211!5.81e-11!60;CL:0002494!6.97e-10!16;CL:0000192!7.77e-10!42;CL:0000514!7.77e-10!42;CL:0000003!1.97e-08!722;CL:0002320!1.52e-07!365;CL:0000220!2.76e-07!246;CL:0002321!5.32e-07!248;CL:0000134!5.77e-07!358|ontology_enrichment_celltype_v019=CL:0002494;1.59e-10;16!CL:0002620;6.55e-10;23!CL:0000359;9.12e-09;32!CL:0002595;3.34e-08;5!CL:0000077;4.76e-07;19|ontology_enrichment_celltype_v019_2=CL:0000057,6.16e-16,76;CL:0002494,2.35e-10,16;CL:0000048,5.12e-10,427;CL:0002620,5.34e-10,23;CL:0000723,6.55e-10,433;CL:0000359,2.79e-09,32;CL:0000680,2.90e-09,58;CL:0000056,2.90e-09,58;CL:0000355,2.90e-09,58;CL:0000034,3.00e-09,441;CL:0000187,3.74e-09,55;CL:0000222,4.72e-09,121;CL:0002595,2.95e-08,5;CL:0002321,1.32e-07,250;CL:0000393,1.37e-07,61;CL:0000211,1.37e-07,61;CL:0000077,4.23e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!3.15e-07!14|ontology_enrichment_disease_v019=DOID:2394;1.18e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,1.30e-07,14|ontology_enrichment_uberon=UBERON:0000914!5.66e-17!83;UBERON:0002329!5.66e-17!83;UBERON:0003077!5.66e-17!83;UBERON:0003059!5.66e-17!83;UBERON:0007282!5.66e-17!83;UBERON:0009618!5.66e-17!83;UBERON:0007285!5.66e-17!83;UBERON:0004290!5.72e-15!70;UBERON:0000486!1.33e-13!82;UBERON:0001134!9.66e-13!61;UBERON:0002036!9.66e-13!61;UBERON:0003082!9.66e-13!61;UBERON:0002385!8.36e-12!63;UBERON:0001015!8.36e-12!63;UBERON:0000383!8.36e-12!63;UBERON:0004872!1.42e-11!84;UBERON:0004573!2.24e-10!33;UBERON:0004571!2.24e-10!33;UBERON:0001637!2.45e-10!42;UBERON:0003509!2.45e-10!42;UBERON:0004572!2.45e-10!42;UBERON:0005256!1.06e-09!143;UBERON:0002204!8.55e-09!167;UBERON:0001981!1.89e-08!60;UBERON:0007500!1.89e-08!60;UBERON:0004537!1.89e-08!60;UBERON:0006965!1.89e-08!60;UBERON:0002199!2.30e-08!45;UBERON:0002416!2.30e-08!45;UBERON:0002097!3.46e-08!40;UBERON:0002384!6.88e-08!375;UBERON:0002049!1.06e-07!79;UBERON:0007798!1.06e-07!79;UBERON:0000055!1.78e-07!69;UBERON:0003102!2.45e-07!95;UBERON:0004535!3.69e-07!110;UBERON:0001009!3.87e-07!113;UBERON:0003914!7.82e-07!118|ontology_enrichment_uberon_v019=UBERON:0003834;3.34e-08;5!UBERON:0001533;3.34e-08;5!UBERON:0003513;1.74e-07;7!UBERON:0004573;2.97e-07;33!UBERON:0004571;2.97e-07;33!UBERON:0000948;8.60e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.04e-09,73;UBERON:0002329,3.31e-09,71;UBERON:0003059,3.31e-09,71;UBERON:0007282,3.31e-09,71;UBERON:0004290,3.31e-09,71;UBERON:0009618,3.31e-09,71;UBERON:0003077,5.77e-09,72;UBERON:0007285,5.77e-09,72;UBERON:0000486,9.05e-09,83;UBERON:0004573,1.55e-08,33;UBERON:0004571,1.55e-08,33;UBERON:0002199,2.67e-08,46;UBERON:0002416,2.67e-08,46;UBERON:0003834,2.95e-08,5;UBERON:0001533,2.95e-08,5;UBERON:0001134,3.30e-08,62;UBERON:0002036,3.30e-08,62;UBERON:0003082,3.30e-08,62;UBERON:0002097,4.88e-08,41;UBERON:0002385,9.78e-08,64;UBERON:0001015,9.78e-08,64;UBERON:0000383,9.78e-08,64;UBERON:0007503,1.14e-07,78;UBERON:0003513,1.57e-07,7;UBERON:0001637,2.72e-07,42;UBERON:0003509,2.72e-07,42;UBERON:0004572,2.72e-07,42;UBERON:0000948,8.29e-07,24;UBERON:0005498,8.29e-07,24;UBERON:0004140,8.29e-07,24;UBERON:0009881,8.29e-07,24;UBERON:0004141,8.29e-07,24;UBERON:0003084,8.29e-07,24;UBERON:0007005,8.29e-07,24;UBERON:0004139,8.29e-07,24;UBERON:0004291,8.29e-07,24|phase1_expression=2.72517568905835,1.49870366723688,2.67813367782345,1.0007329835313,0.446961094427288,1.74467704820074,0,2.52687949370732,0,0,0,0.436882744260345,0,1.11389717664042,0.994192127183747,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.709446689665756,1.37898272294647,0,0,0.941211697713023,1.09162460023138,0.449446968890169,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.580418477257168,1.13477044938228,0,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,2.30152611318355,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0.3642952882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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000439703_5end | |||
|description=CAGE_peak_3_at_ENST00000439703_5end | |||
|id=chr6:169563046..169563081,- | |||
|ontology_enrichment_celltype=CL:0000055!5.37e-29!180;CL:0000057!2.09e-23!75;CL:0000048!1.77e-15!430;CL:0000723!6.99e-15!436;CL:0000680!7.37e-15!57;CL:0000056!7.37e-15!57;CL:0000355!7.37e-15!57;CL:0000222!2.73e-14!119;CL:0000548!3.78e-14!679;CL:0000004!3.78e-14!679;CL:0000255!3.78e-14!679;CL:0000187!5.75e-14!54;CL:0000144!8.98e-14!625;CL:0000012!1.15e-13!682;CL:0000034!1.68e-13!444;CL:0002371!2.22e-12!591;CL:0000183!6.04e-12!59;CL:0002620!1.11e-11!23;CL:0000359!3.64e-11!32;CL:0000393!5.81e-11!60;CL:0000211!5.81e-11!60;CL:0002494!6.97e-10!16;CL:0000192!7.77e-10!42;CL:0000514!7.77e-10!42;CL:0000003!1.97e-08!722;CL:0002320!1.52e-07!365;CL:0000220!2.76e-07!246;CL:0002321!5.32e-07!248;CL:0000134!5.77e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.59e-10;16!CL:0002620;6.55e-10;23!CL:0000359;9.12e-09;32!CL:0002595;3.34e-08;5!CL:0000077;4.76e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.16e-16,76;CL:0002494,2.35e-10,16;CL:0000048,5.12e-10,427;CL:0002620,5.34e-10,23;CL:0000723,6.55e-10,433;CL:0000359,2.79e-09,32;CL:0000680,2.90e-09,58;CL:0000056,2.90e-09,58;CL:0000355,2.90e-09,58;CL:0000034,3.00e-09,441;CL:0000187,3.74e-09,55;CL:0000222,4.72e-09,121;CL:0002595,2.95e-08,5;CL:0002321,1.32e-07,250;CL:0000393,1.37e-07,61;CL:0000211,1.37e-07,61;CL:0000077,4.23e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.15e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.30e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.66e-17!83;UBERON:0002329!5.66e-17!83;UBERON:0003077!5.66e-17!83;UBERON:0003059!5.66e-17!83;UBERON:0007282!5.66e-17!83;UBERON:0009618!5.66e-17!83;UBERON:0007285!5.66e-17!83;UBERON:0004290!5.72e-15!70;UBERON:0000486!1.33e-13!82;UBERON:0001134!9.66e-13!61;UBERON:0002036!9.66e-13!61;UBERON:0003082!9.66e-13!61;UBERON:0002385!8.36e-12!63;UBERON:0001015!8.36e-12!63;UBERON:0000383!8.36e-12!63;UBERON:0004872!1.42e-11!84;UBERON:0004573!2.24e-10!33;UBERON:0004571!2.24e-10!33;UBERON:0001637!2.45e-10!42;UBERON:0003509!2.45e-10!42;UBERON:0004572!2.45e-10!42;UBERON:0005256!1.06e-09!143;UBERON:0002204!8.55e-09!167;UBERON:0001981!1.89e-08!60;UBERON:0007500!1.89e-08!60;UBERON:0004537!1.89e-08!60;UBERON:0006965!1.89e-08!60;UBERON:0002199!2.30e-08!45;UBERON:0002416!2.30e-08!45;UBERON:0002097!3.46e-08!40;UBERON:0002384!6.88e-08!375;UBERON:0002049!1.06e-07!79;UBERON:0007798!1.06e-07!79;UBERON:0000055!1.78e-07!69;UBERON:0003102!2.45e-07!95;UBERON:0004535!3.69e-07!110;UBERON:0001009!3.87e-07!113;UBERON:0003914!7.82e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.34e-08;5!UBERON:0001533;3.34e-08;5!UBERON:0003513;1.74e-07;7!UBERON:0004573;2.97e-07;33!UBERON:0004571;2.97e-07;33!UBERON:0000948;8.60e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.04e-09,73;UBERON:0002329,3.31e-09,71;UBERON:0003059,3.31e-09,71;UBERON:0007282,3.31e-09,71;UBERON:0004290,3.31e-09,71;UBERON:0009618,3.31e-09,71;UBERON:0003077,5.77e-09,72;UBERON:0007285,5.77e-09,72;UBERON:0000486,9.05e-09,83;UBERON:0004573,1.55e-08,33;UBERON:0004571,1.55e-08,33;UBERON:0002199,2.67e-08,46;UBERON:0002416,2.67e-08,46;UBERON:0003834,2.95e-08,5;UBERON:0001533,2.95e-08,5;UBERON:0001134,3.30e-08,62;UBERON:0002036,3.30e-08,62;UBERON:0003082,3.30e-08,62;UBERON:0002097,4.88e-08,41;UBERON:0002385,9.78e-08,64;UBERON:0001015,9.78e-08,64;UBERON:0000383,9.78e-08,64;UBERON:0007503,1.14e-07,78;UBERON:0003513,1.57e-07,7;UBERON:0001637,2.72e-07,42;UBERON:0003509,2.72e-07,42;UBERON:0004572,2.72e-07,42;UBERON:0000948,8.29e-07,24;UBERON:0005498,8.29e-07,24;UBERON:0004140,8.29e-07,24;UBERON:0009881,8.29e-07,24;UBERON:0004141,8.29e-07,24;UBERON:0003084,8.29e-07,24;UBERON:0007005,8.29e-07,24;UBERON:0004139,8.29e-07,24;UBERON:0004291,8.29e-07,24 | |||
|phase1_expression=2.72517568905835,1.49870366723688,2.67813367782345,1.0007329835313,0.446961094427288,1.74467704820074,0,2.52687949370732,0,0,0,0.436882744260345,0,1.11389717664042,0.994192127183747,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.709446689665756,1.37898272294647,0,0,0.941211697713023,1.09162460023138,0.449446968890169,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.580418477257168,1.13477044938228,0,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,2.30152611318355,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,1.13061588384802,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,2.48485975847659,1.51956613997496,0.794455084879313,0,0.709336764396714,0.560677600142307,4.2699598291882,0.74000264525148,0.311211035399766,1.21239604862719,0.490385709340376,0.302714855289863,0,0.70296429550139,1.5608003841516,1.71141546463335,2.09228152772521,0.117434498643765,0.647491777472526,0.421352420106746,3.26646674007829,0.491337269247072,4.54633437173368,0,0.494533858557114,5.46096817162816,1.43723628363248,0.505008341862199,0.375355559615893,1.6623846929051,2.19488810440419,0.919463387397059,0,1.02088964844019,0.358779271377724,1.2813443329114,5.08636562782948,0.900273288253207,2.47326070172253,1.8034837803194,4.46680455195816,0.506328996723799,2.33848812386877,3.28163906517349,4.41839513483037,0.484938170456436,2.13005755509969,2.72030665214629,3.22165125389926,2.51239109112286,1.09098448236334,0,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0,1.1240175325762,0,0,0.325808305310325,6.23960871167747,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0.102827492703324,0,0,0.336393253036082,0,0.1466765716419,4.52451005152222,0,2.535908257668,0.26593811658487,1.04007436911366,0.257207374262142,0,0.799266537048298,0.285955987316295,0.542621605391443,4.93944202068461,2.28015329005615,0.355391948742546,0.791951872933429,0.602878754119172,1.74306691720059,0,0,0,0,1.4377491329495,0,1.42636905040718,0.289562613335158,2.87666851570537,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,2.9115920614313,2.85486382075459,3.15404830067869,2.22568688486155,0.902838299183157,0,0,0.664225598535437,0.368738337083406,1.73767228936166,0,0,0,0,0,0.303127571446259,0,0.604780586659361,3.2254015016441,1.84154367945675,3.08726103876381,4.99742682097234,2.04682899626681,1.12597744800525,7.42090332224955,0.462629081407967,1.24293207719189,0.9033987161519,0,0.581051892299796,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,3.0934629853479,1.54048617114644,0.15350367472613,0.689182862422653,0.751941714077915,0.145016693914229,0.255679882248303,1.51354460599453,0,0,0,0,1.39453664789186,0.31481234683064,0,4.00443654228915,2.66153015158511,0,2.40921484835096,5.00937103596969,0,0.949138274156178,3.43134349062885,1.79128453917934,0.42793898803392,2.54562598340749,3.92474320099615,0.179872457583315,0.274537029736055,0.589062011728432,2.83055474202642,7.92551605865041,4.21258456238981,0,7.7988316682011,5.28250733783777,0.272999822815972,0.141405431953713,0,5.51365343546124,3.3171948762061,2.63070531152258,0,0,0.405820753925408,0.30982349809975,1.97186921772569,0.717056761020258,0.88424136911809,0.7133421029625,0,0.422215270595328,2.63435914367922,1.13841952129715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0,0,0.921482106297696,0,0,1.00177834520615,0,0,0.398495976502139,0,0,0.306806047506464,0,4.3545542272653,0.539210106883961,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,5.58316073650306,0,0,0,0.31900115973192,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0,0,0,1.323967823502,1.2557316736289,0,0,0,0,0.489961987071888,0,0.17472666824203,2.23581842213102,0,0,0,0,0,0,0.274083849293502,0.993573058514948,0,0,0.480952921509202,0,1.19885765749278,0,0,0,0,0.248505071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| |||
|short_description=p3@ENST00000439703 | |||
}} |
Revision as of 19:25, 13 September 2013
Short description: | p3@ENST00000439703 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000439703_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000439703_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.16e-16 | 76 |
cardiocyte | 2.35e-10 | 16 |
multi fate stem cell | 5.12e-10 | 427 |
skin fibroblast | 5.34e-10 | 23 |
somatic stem cell | 6.55e-10 | 433 |
vascular associated smooth muscle cell | 2.79e-09 | 32 |
muscle precursor cell | 2.90e-09 | 58 |
myoblast | 2.90e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-09 | 58 |
stem cell | 3.00e-09 | 441 |
muscle cell | 3.74e-09 | 55 |
mesodermal cell | 4.72e-09 | 121 |
smooth muscle cell of the subclavian artery | 2.95e-08 | 5 |
embryonic cell | 1.32e-07 | 250 |
electrically responsive cell | 1.37e-07 | 61 |
electrically active cell | 1.37e-07 | 61 |
mesothelial cell | 4.23e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.30e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.