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FFCP PHASE1:Mm9::chr1:95532269..95532288,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=59041|HGNC=|UniProt=Q9Z2W1|association_with_transcript=10bp_to_ENSMUST00000027498_5end|description=CAGE_peak_2_at_Stk25_5end|id=chr1:95532269..95532288,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.35e-14!52;UBERON:0005068!6.35e-14!52;UBERON:0006241!6.35e-14!52;UBERON:0007135!6.35e-14!52;UBERON:0000955!4.14e-13!50;UBERON:0006238!4.14e-13!50;UBERON:0002616!8.45e-13!49;UBERON:0001017!1.23e-11!73;UBERON:0005743!1.23e-11!73;UBERON:0003080!3.85e-11!40;UBERON:0000073!1.19e-10!75;UBERON:0001016!1.19e-10!75;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0000033!2.96e-10!63;UBERON:0002020!3.11e-10!34;UBERON:0002346!2.82e-09!71;UBERON:0003075!2.82e-09!71;UBERON:0007284!2.82e-09!71;UBERON:0003056!1.03e-08!49;UBERON:0002791!3.99e-08!29;UBERON:0003528!3.99e-08!29;UBERON:0001893!3.99e-08!29;UBERON:0004121!2.78e-07!102;UBERON:0000924!2.78e-07!102;UBERON:0006601!2.78e-07!102;UBERON:0002021!5.09e-07!10;UBERON:0000411!5.09e-07!10;UBERON:0001950!5.09e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.69e-15,54;UBERON:0001049,6.35e-14,52;UBERON:0005068,6.35e-14,52;UBERON:0006241,6.35e-14,52;UBERON:0007135,6.35e-14,52;UBERON:0001017,1.23e-11,73;UBERON:0000955,1.75e-11,47;UBERON:0006238,1.75e-11,47;UBERON:0002616,3.50e-11,46;UBERON:0003080,3.85e-11,40;UBERON:0001016,1.19e-10,75;UBERON:0002780,1.47e-10,39;UBERON:0001890,1.47e-10,39;UBERON:0006240,1.47e-10,39;UBERON:0002346,2.10e-10,64;UBERON:0003075,2.10e-10,64;UBERON:0007284,2.10e-10,64;UBERON:0002020,3.11e-10,34;UBERON:0003056,1.03e-08,49;UBERON:0010371,2.58e-08,73;UBERON:0003528,3.99e-08,29;UBERON:0002791,3.99e-08,29;UBERON:0001893,3.99e-08,29;UBERON:0004121,6.61e-08,95;UBERON:0000924,6.61e-08,95;UBERON:0006601,6.61e-08,95;UBERON:0010314,3.71e-07,92;UBERON:0002021,5.09e-07,10;UBERON:0000411,5.09e-07,10;UBERON:0001950,5.09e-07,10|phase1_expression=10.7299727560212,22.6834014965585,24.1149596876454,41.1351327377289,46.5833028850103,10.4085148585372,11.4470193891808,15.4947988129892,17.73937899111,23.4064526321993,7.53359060192222,8.13676021752431,10.785645985666,12.3262767410786,11.6588416635482,10.9336644390506,9.79386629379405,6.62470547252299,8.91243818437302,16.5511964201232,19.2197835741418,6.056748023254,5.74639536105658,14.7193028969934,13.9939661450974,16.6527269593356,11.630573896295,12.4973314957816,8.55105387553682,6.30075324399827,7.98229838359097,15.2407361630311,15.9916844771988,31.6963362030877,8.66554859253824,8.31173226792462,12.2501613757421,6.69650609179052,2.3440060335714,4.18818995179039,9.41170380849623,7.5135003345429,2.42755176515577,9.4422613481683,8.00877756634165,5.68994931701213,8.60630478782843,7.84890562969608,10.3252505885202,9.72149495371417,7.8392396110203,17.2503077237966,10.9058693937529,13.7818806982155,9.41062637598899,20.5807548828758,16.3324060765091,17.0171790451556,15.9830004079082,26.9785399428737,13.3104594736298,13.2149367506962,6.22506357277798,8.09909745553259,5.93319817540185,8.5257613793532,10.1864037576258,7.30014780110954,9.7468235569969,12.0155285115205,11.7781978356774,22.2807767834967,26.5042249141936,10.2892271340561,11.6931474642248,13.7882817991503,41.8440347797677,27.3250903502302,26.8811433198426,19.7829431595291,19.0294298693012,13.022834263919,29.8725808931478,31.5147061617741,24.2949213965128,23.8649154233671,20.0744069926735,17.1487490159277,6.36100023998746,10.3533037346296,9.56552812715537,7.74381489283248,10.879541339324,11.3337670243942,6.49776417447669,11.2006721774334,11.7973312910672,12.9527045159324,9.09251016110041,12.7202246823722,13.5209682985613,12.8326477414318,12.7402619853323,21.3320010945999,7.14420435337007,7.85415582972806,6.0662933401774,11.3042040921869,10.616453229534,13.0629082377046,7.80683970447611,14.0054120023585,11.992005857315,13.565037649736,10.347806227942,9.55066094105534,16.3148678704687,11.2787498397531,11.4999371753484,10.5148452465816,9.93786833071771,10.1823803158397,9.31958806090611,18.737971008739,14.2423760633149,7.40825460104915,8.8663192134381,9.59844369589452,7.62421362438388,37.2978692118009,37.972550033946,19.476424577494,35.4601613192244,37.0787413128979,35.5317556196848,36.6665254533132,13.850153483643,9.20611582514688,8.33985102831127,10.7325346502102,7.54698569183682,10.3455946995063,12.7844112161798,10.7000420663358,10.5456573684558,12.0426897067759,10.5882948752494,19.6614561761652,5.38919982332106,8.50977360755187,14.7798944297717,16.8780713969233,14.4584569597311,13.5818344943645,12.5527103208846,15.1266042782055,7.02213187313235,7.97778512055617,3.6941254921427,9.52778553663309,12.8989332989603,7.02242039697958,10.180023630164,10.6252685143598,9.71882811190483,9.99895962426754,12.3405764643825,12.2603609485528,6.25327429671226,12.3125598059321,10.2957388123237,13.5965988305559,11.6361561104257,13.9574675510787,37.4316108444146,19.551876352064,11.5646574044329,11.371374366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|EntrezGene=59041
|HGNC=
|UniProt=Q9Z2W1
|association_with_transcript=10bp_to_ENSMUST00000027498_5end
|description=CAGE_peak_2_at_Stk25_5end
|id=chr1:95532269..95532288,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.35e-14!52;UBERON:0005068!6.35e-14!52;UBERON:0006241!6.35e-14!52;UBERON:0007135!6.35e-14!52;UBERON:0000955!4.14e-13!50;UBERON:0006238!4.14e-13!50;UBERON:0002616!8.45e-13!49;UBERON:0001017!1.23e-11!73;UBERON:0005743!1.23e-11!73;UBERON:0003080!3.85e-11!40;UBERON:0000073!1.19e-10!75;UBERON:0001016!1.19e-10!75;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0000033!2.96e-10!63;UBERON:0002020!3.11e-10!34;UBERON:0002346!2.82e-09!71;UBERON:0003075!2.82e-09!71;UBERON:0007284!2.82e-09!71;UBERON:0003056!1.03e-08!49;UBERON:0002791!3.99e-08!29;UBERON:0003528!3.99e-08!29;UBERON:0001893!3.99e-08!29;UBERON:0004121!2.78e-07!102;UBERON:0000924!2.78e-07!102;UBERON:0006601!2.78e-07!102;UBERON:0002021!5.09e-07!10;UBERON:0000411!5.09e-07!10;UBERON:0001950!5.09e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.69e-15,54;UBERON:0001049,6.35e-14,52;UBERON:0005068,6.35e-14,52;UBERON:0006241,6.35e-14,52;UBERON:0007135,6.35e-14,52;UBERON:0001017,1.23e-11,73;UBERON:0000955,1.75e-11,47;UBERON:0006238,1.75e-11,47;UBERON:0002616,3.50e-11,46;UBERON:0003080,3.85e-11,40;UBERON:0001016,1.19e-10,75;UBERON:0002780,1.47e-10,39;UBERON:0001890,1.47e-10,39;UBERON:0006240,1.47e-10,39;UBERON:0002346,2.10e-10,64;UBERON:0003075,2.10e-10,64;UBERON:0007284,2.10e-10,64;UBERON:0002020,3.11e-10,34;UBERON:0003056,1.03e-08,49;UBERON:0010371,2.58e-08,73;UBERON:0003528,3.99e-08,29;UBERON:0002791,3.99e-08,29;UBERON:0001893,3.99e-08,29;UBERON:0004121,6.61e-08,95;UBERON:0000924,6.61e-08,95;UBERON:0006601,6.61e-08,95;UBERON:0010314,3.71e-07,92;UBERON:0002021,5.09e-07,10;UBERON:0000411,5.09e-07,10;UBERON:0001950,5.09e-07,10
|phase1_expression=10.7299727560212,22.6834014965585,24.1149596876454,41.1351327377289,46.5833028850103,10.4085148585372,11.4470193891808,15.4947988129892,17.73937899111,23.4064526321993,7.53359060192222,8.13676021752431,10.785645985666,12.3262767410786,11.6588416635482,10.9336644390506,9.79386629379405,6.62470547252299,8.91243818437302,16.5511964201232,19.2197835741418,6.056748023254,5.74639536105658,14.7193028969934,13.9939661450974,16.6527269593356,11.630573896295,12.4973314957816,8.55105387553682,6.30075324399827,7.98229838359097,15.2407361630311,15.9916844771988,31.6963362030877,8.66554859253824,8.31173226792462,12.2501613757421,6.69650609179052,2.3440060335714,4.18818995179039,9.41170380849623,7.5135003345429,2.42755176515577,9.4422613481683,8.00877756634165,5.68994931701213,8.60630478782843,7.84890562969608,10.3252505885202,9.72149495371417,7.8392396110203,17.2503077237966,10.9058693937529,13.7818806982155,9.41062637598899,20.5807548828758,16.3324060765091,17.0171790451556,15.9830004079082,26.9785399428737,13.3104594736298,13.2149367506962,6.22506357277798,8.09909745553259,5.93319817540185,8.5257613793532,10.1864037576258,7.30014780110954,9.7468235569969,12.0155285115205,11.7781978356774,22.2807767834967,26.5042249141936,10.2892271340561,11.6931474642248,13.7882817991503,41.8440347797677,27.3250903502302,26.8811433198426,19.7829431595291,19.0294298693012,13.022834263919,29.8725808931478,31.5147061617741,24.2949213965128,23.8649154233671,20.0744069926735,17.1487490159277,6.36100023998746,10.3533037346296,9.56552812715537,7.74381489283248,10.879541339324,11.3337670243942,6.49776417447669,11.2006721774334,11.7973312910672,12.9527045159324,9.09251016110041,12.7202246823722,13.5209682985613,12.8326477414318,12.7402619853323,21.3320010945999,7.14420435337007,7.85415582972806,6.0662933401774,11.3042040921869,10.616453229534,13.0629082377046,7.80683970447611,14.0054120023585,11.992005857315,13.565037649736,10.347806227942,9.55066094105534,16.3148678704687,11.2787498397531,11.4999371753484,10.5148452465816,9.93786833071771,10.1823803158397,9.31958806090611,18.737971008739,14.2423760633149,7.40825460104915,8.8663192134381,9.59844369589452,7.62421362438388,37.2978692118009,37.972550033946,19.476424577494,35.4601613192244,37.0787413128979,35.5317556196848,36.6665254533132,13.850153483643,9.20611582514688,8.33985102831127,10.7325346502102,7.54698569183682,10.3455946995063,12.7844112161798,10.7000420663358,10.5456573684558,12.0426897067759,10.5882948752494,19.6614561761652,5.38919982332106,8.50977360755187,14.7798944297717,16.8780713969233,14.4584569597311,13.5818344943645,12.5527103208846,15.1266042782055,7.02213187313235,7.97778512055617,3.6941254921427,9.52778553663309,12.8989332989603,7.02242039697958,10.180023630164,10.6252685143598,9.71882811190483,9.99895962426754,12.3405764643825,12.2603609485528,6.25327429671226,12.3125598059321,10.2957388123237,13.5965988305559,11.6361561104257,13.9574675510787,37.4316108444146,19.551876352064,11.5646574044329,11.3713743665324,7.03851226766272,7.89604684325491,9.92279452180119,15.1262643467507,14.6769508937614,10.2721838100782,8.54152310780121,12.5171205590248,11.8127548136127,11.1415624343044,13.6474860983384,12.5834717211591,10.59076444386,15.3338780405863,12.1387456609972,8.91138398355885,10.1436962105772,7.73875045812194,10.861339281387,9.60860732497364,12.3943612763544,12.8420828742254,10.5189147653721,12.8333050478673,9.78293669387591,9.00963570866908,9.04171377520734,8.54476027062444,8.11440485554012,11.8176808278684,14.0044218479781,11.5078454980324,7.13394997810156,7.96228098245436,12.9391385874619,9.30352369171258,9.36113019343682,9.34541848404313,6.99649912735457,14.473305640901,13.3022296919955,10.2325362356062,12.385338209594,11.8821560042632,10.7957514212711,14.0705256251125,18.091316707337,12.8788207586147,15.4482441224067,12.1805579306826,12.2780171866265,14.5838350097007,12.6060036762104,16.0560455025478,7.53956419696361,4.89515115436839,18.1952781017043,9.65778612066564,33.0734215374851,32.5848488726325,8.6885521049638,14.6433137778536,8.20321370482267,11.7131623288992,10.7711698866399,11.709471099675,10.0259403337077,12.7384438854975,6.47697122679831,9.9366991689846,13.8350722281283,16.708708453934,11.071326646245,15.4917075190512,13.5196176263468,10.0631775013247,17.2568679841952,8.25454162926937,10.2790009368015,17.3516673375426,18.8993211443695,15.6791925451403,12.9214146584111,10.5424781548477,11.0514187299264,11.0612865277536,23.1920938864997,20.6271086496374,18.7241783164583,9.72329907769075,16.2991941566271,12.4315480318324,17.3793428969428,20.155676389034,16.6194510808142,18.8768268451052,7.97883807416615,31.3511464878454,15.6575162619023,11.7069239588451,11.1410454420175,9.04693873922338,6.08798954415996,8.69946768648825,14.5740418314925,32.4494278518392,9.56876932467975,7.84270098260245,12.5932278611404,9.60679130723924,8.61173634642459,9.37990510146743,13.7682528295023,12.3157278044819,12.4379976423981,13.3653886522116,8.85740782027179,12.8091264289915,10.0444966964275,10.8725913927524,13.538478952263,9.44050424693745,8.92657321833628,12.0407733312654,8.55458823725833,14.2908042009993,105.974272472628,11.2137409532984,12.5748452747394,18.4728628926845,13.3034618182063,16.0508319216239,12.7919390123872,10.2861464026721,17.0920731413909,59.4296937231975,48.3890410513214,15.8005560314089,8.71718425747706,8.93585327333997,8.70469513951227,6.62398773969681,7.15252877212554,9.01465871399766,8.86137163047463,7.67345019605922,9.90688486514998,8.57022573663144,11.9873193309895,8.56285390598932,12.5058285334279,9.9761368790693,12.8751852956958,9.5993826572139,11.0803846800292,10.0458588896739,14.2638681342898,11.3554007045704,7.71726164684637,17.5550236412377,34.4498623996411,37.7466693935885,23.4887160510153,25.2624178045221,26.718218271055,33.9927253825365,34.4261475118221,31.9728054289197,26.7354021300681,29.5123377698537,9.54843597774425,18.3551441764474,13.4879548545766,12.8846560046196,15.7209871970987,12.869045591501,14.0015438515018,17.512979865306,18.2923949467335,15.6672271293554,19.7713853914387,12.6379648728671,11.3306224038558,12.9971059381885,11.0850455084334,10.0021675169445,11.3566639425958,10.9958255664312,17.3076078337389,14.2782952530365,13.0290315906458,13.4881612681096,14.7830437767339,16.2787986628208,14.1164070622996,14.8075563810434,14.0854539112035,13.9426947062057,13.5804113845862,19.6399795080208,15.0666473017701,11.7220334026921,18.415396942636,12.2400104536913,14.0821826016233,15.4882558321526,16.1412809827332,12.8922632428979,15.1117782334386,11.2501623750953,13.9120701372253
|short_description=p2@Stk25
}}

Revision as of 21:21, 13 September 2013

Short description:p2@Stk25
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Stk25_5end
Coexpression cluster:NA
Association with transcript: 10bp_to_ENSMUST00000027498_5end
EntrezGene:Stk25
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Stk25

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I446.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.41
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.45
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.62
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.99
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I212.50
Ileum epithelium, pool1.CNhs13199.10252-104B98.55
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C810.19
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D341.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.33
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.88
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.15
Mouse Schwann, donor1.CNhs12507.11728-123D96.36
Mouse Schwann, donor2.CNhs12573.11746-123F910.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.30
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C110.35
adrenal gland, neonate N25.CNhs11223.1377-27I39.55
amnion, adult pregnant day17.5.CNhs10488.583-22A816.31
aorta, adult.CNhs10498.46-23H111.28
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F510.51
bone (os femoris), neonate N16.CNhs11225.1525-43A69.94
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.62
corpora quadrigemina, adult.CNhs10501.16-22A437.30
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F119.48
cortex, adult.CNhs10473.12-14D535.46
cortex, neonate N30.CNhs11107.1392-42F237.08
diencephalon, adult.CNhs10482.20-12F235.53
diencephalon, neonate N30.CNhs11201.1388-42B236.67
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.21
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C912.78
eyeball, embryo E17.CNhs11023.1261-18D410.70
eyeball, neonate N00.CNhs11207.633-15C610.55
eyeball, neonate N01.CNhs11140.1532-43E712.04
eyeball, neonate N02.CNhs11205.1551-44G810.59
eyeball, neonate N16.CNhs11188.777-19A219.66
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H28.51
forelimb, embryo E13.CNhs10589.384-1E214.78
forelimb, embryo E14.CNhs10577.413-26A816.88
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B512.55
gonad, embryo E13.CNhs11044.1564-45I615.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F512.90
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C810.63
heart, embryo E16.CNhs11021.457-17C69.72
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E312.26
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G112.31
heart, neonate N16.CNhs11209.782-15G110.30
heart, neonate N20.CNhs11127.821-26I613.60
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D213.96
hippocampus, adult.CNhs10478.13-16E837.43
hippocampus, neonate N00.CNhs11228.627-43G119.55
intestinal mucosa, adult.CNhs10506.860-29I311.56
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D89.92
intestine, embryo E16.CNhs10585.463-22H415.13
intestine, embryo E17.CNhs10582.482-18D314.68
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E912.52
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F211.14
intestine, neonate N10.CNhs11098.755-23A513.65
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E310.59
intestine, neonate N30.CNhs11131.1384-42G115.33
kidney, embryo E14.CNhs10606.411-4I912.14
kidney, embryo E15.CNhs10997.434-16F88.91
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I27.74
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G79.61
kidney, neonate N10.CNhs11206.758-6D512.39
kidney, neonate N20.CNhs11113.832-19I112.84
kidney, neonate N25.CNhs11122.1353-25F310.52
kidney, neonate N30.CNhs11203.1385-42H112.83
liver, adult pregnant day01.CNhs10466.508-5B29.78
liver, embryo E12.CNhs10601.355-15F89.01
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F511.82
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A39.35
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B113.30
lung, embryo E12.CNhs10522.354-16G210.23
lung, embryo E14.CNhs10604.404-26F812.39
lung, embryo E15.CNhs11020.432-17C511.88
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A614.07
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C612.88
lung, neonate N06.CNhs11212.683-20E515.45
lung, neonate N07.CNhs11111.715-19A312.18
lung, neonate N10.CNhs11219.750-23E612.28
lung, neonate N20.CNhs11109.822-18A414.58
lung, neonate N25.CNhs11119.1359-25C712.61
lung, neonate N30.CNhs11133.1394-42H216.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B618.20
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C233.07
medulla oblongata, neonate N30.CNhs11200.1396-42A332.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.64
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I711.07
ovary, embryo E18.CNhs11040.505-44H715.49
ovary, neonate N00.CNhs11217.1299-22I413.52
oviduct, adult pregnant day01.CNhs10500.988-6G610.06
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F210.28
pancreas, embryo E16.CNhs11003.460-26E517.35
pancreas, embryo E17.CNhs10599.1558-45G318.90
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C716.30
pituitary gland, embryo E14.CNhs11037.398-44A512.43
pituitary gland, embryo E15.CNhs10592.427-16B917.38
pituitary gland, embryo E16.CNhs11036.449-43F620.16
pituitary gland, embryo E17.CNhs11039.1265-44F516.62
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G331.35
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C311.71
skin, neonate N00.CNhs11124.650-25G411.14
skin, neonate N03.CNhs11215.662-22H39.05
skin, neonate N06.CNhs11097.693-20I56.09
skin, neonate N10.CNhs11108.762-6C48.70
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C932.45
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D19.61
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.44
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E38.86
stomach, embryo E15.CNhs10603.1252-16G812.81
stomach, embryo E16.CNhs11022.459-17D410.04
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B89.44
stomach, neonate N07.CNhs11210.718-18A98.93
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I18.55
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G5105.97
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C512.57
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I513.30
testis, embryo E18.CNhs11027.503-18G516.05
testis, neonate N00.CNhs11189.1300-22B712.79
testis, neonate N07.CNhs11222.726-26I410.29
testis, neonate N10.CNhs11204.763-44D917.09
testis, neonate N20.CNhs11110.839-18H359.43
testis, neonate N30.CNhs11130.1391-42E248.39
thymus, adult.CNhs10471.38-12B515.80
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I28.94
thymus, embryo E16.CNhs11002.456-26C58.70
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F89.01
thymus, neonate N03.CNhs11137.2104-43C78.86
thymus, neonate N06.CNhs11197.681-26C47.67
thymus, neonate N07.CNhs11211.713-19D39.91
thymus, neonate N10.CNhs11194.748-24E48.57
thymus, neonate N20.CNhs11186.820-7A211.99
thymus, neonate N25.CNhs11125.1362-25G78.56
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B49.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.08
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F514.26
uterus, adult.CNhs10509.92-27E511.36
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A634.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A929.51
whole body, embryo E11.CNhs11014.324-5I89.55
whole body, embryo E12.CNhs10587.857-27C918.36
whole body, embryo E13.CNhs10512.372-23H213.49
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F212.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.24
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I515.49
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C212.89
whole body, neonate N01.CNhs10576.659-23C615.11
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B413.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.69e-1554
neural tube6.35e-1452
neural rod6.35e-1452
future spinal cord6.35e-1452
neural keel6.35e-1452
central nervous system1.23e-1173
brain1.75e-1147
future brain1.75e-1147
regional part of brain3.50e-1146
anterior neural tube3.85e-1140
nervous system1.19e-1075
regional part of forebrain1.47e-1039
forebrain1.47e-1039
future forebrain1.47e-1039
neurectoderm2.10e-1064
neural plate2.10e-1064
presumptive neural plate2.10e-1064
gray matter3.11e-1034
pre-chordal neural plate1.03e-0849
ecto-epithelium2.58e-0873
brain grey matter3.99e-0829
regional part of telencephalon3.99e-0829
telencephalon3.99e-0829
ectoderm-derived structure6.61e-0895
ectoderm6.61e-0895
presumptive ectoderm6.61e-0895
structure with developmental contribution from neural crest3.71e-0792
occipital lobe5.09e-0710
visual cortex5.09e-0710
neocortex5.09e-0710







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