FFCP PHASE1:Mm9::chr2:140497164..140497175,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71436|HGNC=|MCL_coexpression_id=2332|UniProt=Q3V411|association_with_transcript=10bp_to_ENSMUST00000099301,ENSMUST00000172544_5end|description=CAGE_peak_4_at_Flrt3_5end|id=chr2:140497164..140497175,-|ontology_enrichment_celltype=CL:0000540!1.62e-07!33;CL:0000047!1.62e-07!33;CL:0000031!1.62e-07!33;CL:0000404!1.62e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,4.80e-08,33;CL:0000047,4.80e-08,33;CL:0000031,4.80e-08,33;CL:0000404,4.80e-08,33;CL:0000117,3.47e-07,23;CL:0000337,3.47e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.32e-15!75;UBERON:0001016!1.32e-15!75;UBERON:0004121!2.35e-15!102;UBERON:0000924!2.35e-15!102;UBERON:0006601!2.35e-15!102;UBERON:0001017!4.30e-15!73;UBERON:0005743!4.30e-15!73;UBERON:0003056!6.27e-15!49;UBERON:0001049!6.97e-15!52;UBERON:0005068!6.97e-15!52;UBERON:0006241!6.97e-15!52;UBERON:0007135!6.97e-15!52;UBERON:0002346!2.42e-14!71;UBERON:0003075!2.42e-14!71;UBERON:0007284!2.42e-14!71;UBERON:0003080!8.17e-14!40;UBERON:0002616!8.83e-14!49;UBERON:0000955!1.66e-13!50;UBERON:0006238!1.66e-13!50;UBERON:0000033!1.70e-13!63;UBERON:0002780!2.81e-13!39;UBERON:0001890!2.81e-13!39;UBERON:0006240!2.81e-13!39;UBERON:0002020!1.88e-10!34;UBERON:0002791!3.55e-09!29;UBERON:0003528!3.55e-09!29;UBERON:0001893!3.55e-09!29;UBERON:0000468!8.43e-09!333;UBERON:0000922!1.60e-07!328;UBERON:0000153!3.55e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0010371,6.36e-21,73;UBERON:0004121,1.60e-19,95;UBERON:0000924,1.60e-19,95;UBERON:0006601,1.60e-19,95;UBERON:0002346,3.51e-19,64;UBERON:0003075,3.51e-19,64;UBERON:0007284,3.51e-19,64;UBERON:0001016,7.63e-18,75;UBERON:0000073,7.89e-18,54;UBERON:0001049,1.78e-17,52;UBERON:0005068,1.78e-17,52;UBERON:0006241,1.78e-17,52;UBERON:0007135,1.78e-17,52;UBERON:0001017,2.99e-17,73;UBERON:0003056,1.33e-16,49;UBERON:0002616,1.08e-15,46;UBERON:0003080,1.19e-15,40;UBERON:0002780,4.94e-15,39;UBERON:0001890,4.94e-15,39;UBERON:0006240,4.94e-15,39;UBERON:0000955,5.73e-15,47;UBERON:0006238,5.73e-15,47;UBERON:0002020,9.01e-12,34;UBERON:0003528,2.69e-10,29;UBERON:0002791,2.69e-10,29;UBERON:0001893,2.69e-10,29;UBERON:0010314,9.01e-10,92;UBERON:0000956,1.95e-07,21;UBERON:0001869,1.95e-07,21;UBERON:0000203,1.95e-07,21;UBERON:0000922,2.04e-07,320;UBERON:0011216,3.04e-07,194|phase1_expression=1.76163731815273,0.697950815278722,2.72999543633722,4.23449895829562,2.00358291978539,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,2.23989391910769,0.45881856213434,0.57423196411502,0.430761996159075,0.861884930743556,2.85035129184561,2.26827116783938,0.443461021310609,0,0,0,1.1554064790051,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.58328969722285,0.699932108126813,0,0,0,0,0,0,0,2.83243045203437,3.70293685490423,1.90149421051854,0,0.889294796111139,0.449949858640699,0,0,0,0,2.48855069540346,2.70011876663381,3.36519938162211,1.99955689082663,1.32521124570968,1.95985278743926,1.24599112323707,1.83843757322004,2.20231761998777,1.78762273319263,1.53606533256243,2.1101806036831,1.73826522844578,2.6045668527838,1.3959149950069,3.37657566019008,1.98637722109853,3.83017161115768,2.84743361598206,2.05039390407831,1.28734528666413,3.55186332501892,0.869593466105033,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0.22836775943812,1.55362730188303,1.03909497345377,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.705532242814229,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,4.39171195517321,2.93225389538837,1.27728527604296,0.359445373517761,0,0.254140454146129,3.74476598512057,10.5225138648284,8.41884159156192,4.34560800480691,2.04572365864264,2.49345653471472,3.89379031362618,2.03678727700633,0.124406970610093,0.758168275301024,0.420883711772948,6.63614259109789,1.14951052216736,3.24111833649629,2.41127708537144,2.31324097114515,2.0498195245576,2.15513966487376,0.258703370739016,3.66465587985832,3.9712276835242,2.28736461413134,2.6303487891309,4.17070873838397,4.52727816478817,2.46938563689532,3.18454826909589,0,0,0,2.48550927042602,3.04883877975425,0.900310307305074,1.65721314909647,1.77087808572663,0.925602677324269,0.232533944750408,0.536546802799238,0.467061369468678,0,0,0,0.146199987425332,0,0,4.83666881697493,4.21908910755066,1.32167513193519,1.05780226665418,4.47905326123991,2.78684006232526,2.57734922644187,2.01683524623343,3.11329261382818,2.66315876557583,0.474529061544512,2.47048432086016,1.50801125280162,2.38747766449381,3.31438948102504,2.69645822596266,1.94524244887225,1.39398891278057,0.569003702859245,1.25673363870702,3.38123207019241,0.610953983535943,0.193952487167626,0.841629838683823,0.569128834118316,0.147610147979602,0.156998727841375,0.370191491765402,0,0.83422552858047,0.589676985339609,0,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.624075346229121,0.252578877947112,0,0,2.21703828199926,1.3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| ||
|EntrezGene=71436 | |||
|HGNC= | |||
|MCL_coexpression_id=2332 | |||
|UniProt=Q3V411 | |||
|association_with_transcript=10bp_to_ENSMUST00000099301,ENSMUST00000172544_5end | |||
|description=CAGE_peak_4_at_Flrt3_5end | |||
|id=chr2:140497164..140497175,- | |||
|ontology_enrichment_celltype=CL:0000540!1.62e-07!33;CL:0000047!1.62e-07!33;CL:0000031!1.62e-07!33;CL:0000404!1.62e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.80e-08,33;CL:0000047,4.80e-08,33;CL:0000031,4.80e-08,33;CL:0000404,4.80e-08,33;CL:0000117,3.47e-07,23;CL:0000337,3.47e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.32e-15!75;UBERON:0001016!1.32e-15!75;UBERON:0004121!2.35e-15!102;UBERON:0000924!2.35e-15!102;UBERON:0006601!2.35e-15!102;UBERON:0001017!4.30e-15!73;UBERON:0005743!4.30e-15!73;UBERON:0003056!6.27e-15!49;UBERON:0001049!6.97e-15!52;UBERON:0005068!6.97e-15!52;UBERON:0006241!6.97e-15!52;UBERON:0007135!6.97e-15!52;UBERON:0002346!2.42e-14!71;UBERON:0003075!2.42e-14!71;UBERON:0007284!2.42e-14!71;UBERON:0003080!8.17e-14!40;UBERON:0002616!8.83e-14!49;UBERON:0000955!1.66e-13!50;UBERON:0006238!1.66e-13!50;UBERON:0000033!1.70e-13!63;UBERON:0002780!2.81e-13!39;UBERON:0001890!2.81e-13!39;UBERON:0006240!2.81e-13!39;UBERON:0002020!1.88e-10!34;UBERON:0002791!3.55e-09!29;UBERON:0003528!3.55e-09!29;UBERON:0001893!3.55e-09!29;UBERON:0000468!8.43e-09!333;UBERON:0000922!1.60e-07!328;UBERON:0000153!3.55e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,6.36e-21,73;UBERON:0004121,1.60e-19,95;UBERON:0000924,1.60e-19,95;UBERON:0006601,1.60e-19,95;UBERON:0002346,3.51e-19,64;UBERON:0003075,3.51e-19,64;UBERON:0007284,3.51e-19,64;UBERON:0001016,7.63e-18,75;UBERON:0000073,7.89e-18,54;UBERON:0001049,1.78e-17,52;UBERON:0005068,1.78e-17,52;UBERON:0006241,1.78e-17,52;UBERON:0007135,1.78e-17,52;UBERON:0001017,2.99e-17,73;UBERON:0003056,1.33e-16,49;UBERON:0002616,1.08e-15,46;UBERON:0003080,1.19e-15,40;UBERON:0002780,4.94e-15,39;UBERON:0001890,4.94e-15,39;UBERON:0006240,4.94e-15,39;UBERON:0000955,5.73e-15,47;UBERON:0006238,5.73e-15,47;UBERON:0002020,9.01e-12,34;UBERON:0003528,2.69e-10,29;UBERON:0002791,2.69e-10,29;UBERON:0001893,2.69e-10,29;UBERON:0010314,9.01e-10,92;UBERON:0000956,1.95e-07,21;UBERON:0001869,1.95e-07,21;UBERON:0000203,1.95e-07,21;UBERON:0000922,2.04e-07,320;UBERON:0011216,3.04e-07,194 | |||
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| |||
|short_description=p4@Flrt3 | |||
}} |
Revision as of 22:15, 13 September 2013
Short description: | p4@Flrt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Flrt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2332 |
Association with transcript: | 10bp_to_ENSMUST00000099301, ENSMUST00000172544_5end |
EntrezGene: | Flrt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.80e-08 | 33 |
neuronal stem cell | 4.80e-08 | 33 |
neuroblast | 4.80e-08 | 33 |
electrically signaling cell | 4.80e-08 | 33 |
CNS neuron (sensu Vertebrata) | 3.47e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.47e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 6.36e-21 | 73 |
ectoderm-derived structure | 1.60e-19 | 95 |
ectoderm | 1.60e-19 | 95 |
presumptive ectoderm | 1.60e-19 | 95 |
neurectoderm | 3.51e-19 | 64 |
neural plate | 3.51e-19 | 64 |
presumptive neural plate | 3.51e-19 | 64 |
nervous system | 7.63e-18 | 75 |
regional part of nervous system | 7.89e-18 | 54 |
neural tube | 1.78e-17 | 52 |
neural rod | 1.78e-17 | 52 |
future spinal cord | 1.78e-17 | 52 |
neural keel | 1.78e-17 | 52 |
central nervous system | 2.99e-17 | 73 |
pre-chordal neural plate | 1.33e-16 | 49 |
regional part of brain | 1.08e-15 | 46 |
anterior neural tube | 1.19e-15 | 40 |
regional part of forebrain | 4.94e-15 | 39 |
forebrain | 4.94e-15 | 39 |
future forebrain | 4.94e-15 | 39 |
brain | 5.73e-15 | 47 |
future brain | 5.73e-15 | 47 |
gray matter | 9.01e-12 | 34 |
brain grey matter | 2.69e-10 | 29 |
regional part of telencephalon | 2.69e-10 | 29 |
telencephalon | 2.69e-10 | 29 |
structure with developmental contribution from neural crest | 9.01e-10 | 92 |
cerebral cortex | 1.95e-07 | 21 |
cerebral hemisphere | 1.95e-07 | 21 |
pallium | 1.95e-07 | 21 |
embryo | 2.04e-07 | 320 |
organ system subdivision | 3.04e-07 | 194 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.