FFCP PHASE1:Mm9::chr2:148701157..148701180,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13010|HGNC=|MCL_coexpression_id=2334|UniProt=|association_with_transcript=6bp_to_ENSMUST00000149691_5end|description=CAGE_peak_1_at_Cst3_5end|id=chr2:148701157..148701180,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.14e-13!102;UBERON:0000924!4.14e-13!102;UBERON:0006601!4.14e-13!102;UBERON:0000073!2.85e-11!75;UBERON:0001016!2.85e-11!75;UBERON:0001017!2.92e-11!73;UBERON:0005743!2.92e-11!73;UBERON:0000033!1.27e-10!63;UBERON:0002346!1.54e-10!71;UBERON:0003075!1.54e-10!71;UBERON:0007284!1.54e-10!71;UBERON:0004111!2.36e-10!122;UBERON:0001049!1.38e-09!52;UBERON:0005068!1.38e-09!52;UBERON:0006241!1.38e-09!52;UBERON:0007135!1.38e-09!52;UBERON:0000955!1.70e-09!50;UBERON:0006238!1.70e-09!50;UBERON:0002204!3.02e-09!32;UBERON:0000025!4.48e-09!114;UBERON:0002616!4.78e-09!49;UBERON:0000477!8.76e-08!154;UBERON:0000480!3.54e-07!308;UBERON:0000467!3.54e-07!308;UBERON:0002020!3.58e-07!34;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.67e-14,92;UBERON:0004121,2.40e-12,95;UBERON:0000924,2.40e-12,95;UBERON:0006601,2.40e-12,95;UBERON:0001016,2.85e-11,75;UBERON:0001017,2.92e-11,73;UBERON:0000073,1.21e-10,54;UBERON:0010371,2.07e-10,73;UBERON:0004111,2.36e-10,122;UBERON:0002346,6.12e-10,64;UBERON:0003075,6.12e-10,64;UBERON:0007284,6.12e-10,64;UBERON:0001049,1.38e-09,52;UBERON:0005068,1.38e-09,52;UBERON:0006241,1.38e-09,52;UBERON:0007135,1.38e-09,52;UBERON:0002204,3.02e-09,32;UBERON:0000025,4.48e-09,114;UBERON:0000955,4.48e-08,47;UBERON:0006238,4.48e-08,47;UBERON:0002616,1.19e-07,46;UBERON:0002020,3.58e-07,34;UBERON:0002021,5.24e-07,10;UBERON:0000411,5.24e-07,10;UBERON:0001950,5.24e-07,10|phase1_expression=251.433689954527,7.67745896806594,8.18998630901165,1.81478526784098,2.50447864973174,8.56184286750638,10.5125688267987,9.16775596435192,10.8407316056783,5.61754863172784,1.54096171402954,1.91453181588807,5.9920255475922,4.54586092578786,234.842382080042,138.898033429421,86.046111009762,167.668140887903,163.166175990829,225.350905104754,424.706191014442,76.2554505222799,66.8671460195675,38.3981814704176,50.6994511158446,14.3557991028755,17.230479846363,15.7293999860699,20.7125527207448,19.4063199915147,33.481307108951,2.54012269383853,2.46025915033828,0,8.37669697278696,8.81043620400009,7.75843553797003,279.997660962991,431.297110177138,263.855966962794,476.467505305122,399.581608700691,345.683371358181,269.29329364976,242.18948868342,203.920441651628,1419.25789864734,2446.67830490137,7181.10194122441,5467.36876196885,586.683093031894,1096.83206610473,44.2946079992424,3.62681071005672,11.0910953717013,483.904999183616,767.909619035868,2520.60518705214,67.3713814662461,83.0515837457092,80.4965882452848,253.116865455642,435.754450094458,1216.21446790581,1647.45136003658,1415.27638897263,4569.80048573723,5243.42721272326,20.841612074004,28.0812351729917,33.4416688548697,4303.6177310277,2727.72648075243,38.8295833511404,33.1625329723098,29.4150011715207,2311.33234217717,1417.58482742175,1662.63711596558,79.5274315013069,65.4136651757229,95.8480601824438,2230.67216202103,2933.11872348512,1860.01307018711,985.237989823945,710.719430549122,64.8670071472046,107.98555169312,111.090193356975,615.09244502496,195.316220074775,15.6393406752783,35.0807074564581,61.0789832400809,51.9711189032909,374.143935230987,272.85894644747,340.839238038964,329.665823018147,138.026551381147,275.901926440783,229.324715735981,163.545341725266,11.2575341325831,10.8944742154292,12.1325866803548,179.839610557519,268.000709574823,202.029751267227,86.3956927295357,164.411358288556,163.506387554545,186.443906363594,153.806028933502,149.040577316995,52.6525281274216,621.054237971021,283.07537662396,90.5894359705491,253.084380155611,284.13689833724,78.2845397116113,271.700579626716,336.790304556036,107.291963187608,247.657862353737,202.767123075772,301.664719071456,1399.04457204104,1437.92439465894,221.026005366528,1318.97894161899,1467.8067250761,1653.78504664954,1563.68129344705,85.341386906565,367.373784211605,217.088849494527,363.012201404168,62.7180535080232,87.3627996847197,73.2852868307771,127.345571071179,133.827793830662,193.579831350408,220.573859613602,525.68524934168,12.287375597172,16.0740168142646,11.7887253189846,29.8106196101502,39.2046621408093,56.7651031431131,84.1648937908489,35.6271337605103,205.748463882778,143.342784262896,167.088137644608,95.8992326839374,107.881987591304,132.525677235307,74.8113364449264,94.4468312387538,106.444307892291,89.2930347841566,97.6515181094614,117.465934421373,176.408159107251,455.236377891331,537.486207289023,856.439526337597,729.34548299687,899.04879927573,1676.43146995322,194.18100355971,28.7464341195904,52.8901133327089,39.0317498479478,31.3519507011592,19.8455890436024,19.9666689377109,23.3496946037114,28.7240695429964,77.8227660932999,39.1983512243146,71.1278640904763,89.3314559464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| ||
|EntrezGene=13010 | |||
|HGNC= | |||
|MCL_coexpression_id=2334 | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENSMUST00000149691_5end | |||
|description=CAGE_peak_1_at_Cst3_5end | |||
|id=chr2:148701157..148701180,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.14e-13!102;UBERON:0000924!4.14e-13!102;UBERON:0006601!4.14e-13!102;UBERON:0000073!2.85e-11!75;UBERON:0001016!2.85e-11!75;UBERON:0001017!2.92e-11!73;UBERON:0005743!2.92e-11!73;UBERON:0000033!1.27e-10!63;UBERON:0002346!1.54e-10!71;UBERON:0003075!1.54e-10!71;UBERON:0007284!1.54e-10!71;UBERON:0004111!2.36e-10!122;UBERON:0001049!1.38e-09!52;UBERON:0005068!1.38e-09!52;UBERON:0006241!1.38e-09!52;UBERON:0007135!1.38e-09!52;UBERON:0000955!1.70e-09!50;UBERON:0006238!1.70e-09!50;UBERON:0002204!3.02e-09!32;UBERON:0000025!4.48e-09!114;UBERON:0002616!4.78e-09!49;UBERON:0000477!8.76e-08!154;UBERON:0000480!3.54e-07!308;UBERON:0000467!3.54e-07!308;UBERON:0002020!3.58e-07!34;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.67e-14,92;UBERON:0004121,2.40e-12,95;UBERON:0000924,2.40e-12,95;UBERON:0006601,2.40e-12,95;UBERON:0001016,2.85e-11,75;UBERON:0001017,2.92e-11,73;UBERON:0000073,1.21e-10,54;UBERON:0010371,2.07e-10,73;UBERON:0004111,2.36e-10,122;UBERON:0002346,6.12e-10,64;UBERON:0003075,6.12e-10,64;UBERON:0007284,6.12e-10,64;UBERON:0001049,1.38e-09,52;UBERON:0005068,1.38e-09,52;UBERON:0006241,1.38e-09,52;UBERON:0007135,1.38e-09,52;UBERON:0002204,3.02e-09,32;UBERON:0000025,4.48e-09,114;UBERON:0000955,4.48e-08,47;UBERON:0006238,4.48e-08,47;UBERON:0002616,1.19e-07,46;UBERON:0002020,3.58e-07,34;UBERON:0002021,5.24e-07,10;UBERON:0000411,5.24e-07,10;UBERON:0001950,5.24e-07,10 | |||
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| |||
|short_description=p1@Cst3 | |||
}} |
Revision as of 22:22, 13 September 2013
Short description: | p1@Cst3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cst3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2334 |
Association with transcript: | 6bp_to_ENSMUST00000149691_5end |
EntrezGene: | Cst3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.67e-14 | 92 |
ectoderm-derived structure | 2.40e-12 | 95 |
ectoderm | 2.40e-12 | 95 |
presumptive ectoderm | 2.40e-12 | 95 |
nervous system | 2.85e-11 | 75 |
central nervous system | 2.92e-11 | 73 |
regional part of nervous system | 1.21e-10 | 54 |
ecto-epithelium | 2.07e-10 | 73 |
anatomical conduit | 2.36e-10 | 122 |
neurectoderm | 6.12e-10 | 64 |
neural plate | 6.12e-10 | 64 |
presumptive neural plate | 6.12e-10 | 64 |
neural tube | 1.38e-09 | 52 |
neural rod | 1.38e-09 | 52 |
future spinal cord | 1.38e-09 | 52 |
neural keel | 1.38e-09 | 52 |
musculoskeletal system | 3.02e-09 | 32 |
tube | 4.48e-09 | 114 |
brain | 4.48e-08 | 47 |
future brain | 4.48e-08 | 47 |
regional part of brain | 1.19e-07 | 46 |
gray matter | 3.58e-07 | 34 |
occipital lobe | 5.24e-07 | 10 |
visual cortex | 5.24e-07 | 10 |
neocortex | 5.24e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.