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FFCP PHASE1:Mm9::chr2:163896785..163896788,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67145|HGNC=|UniProt=Q9CYG7|association_with_transcript=49bp_to_ENSMUST00000018466,NM_025996,uc008ntr.1_5end|description=CAGE_peak_6_at_Tomm34_5end|id=chr2:163896785..163896788,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.74e-08,1;CL:0002078,1.74e-08,1;CL:0000115,1.74e-08,1;CL:0002262,1.74e-08,1;CL:1000398,1.74e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.74e-12!52;UBERON:0005068!2.74e-12!52;UBERON:0006241!2.74e-12!52;UBERON:0007135!2.74e-12!52;UBERON:0000955!6.66e-11!50;UBERON:0006238!6.66e-11!50;UBERON:0002616!1.78e-10!49;UBERON:0001017!2.27e-10!73;UBERON:0005743!2.27e-10!73;UBERON:0000073!1.36e-09!75;UBERON:0001016!1.36e-09!75;UBERON:0000033!1.36e-09!63;UBERON:0002346!5.35e-09!71;UBERON:0003075!5.35e-09!71;UBERON:0007284!5.35e-09!71;UBERON:0003080!7.58e-09!40;UBERON:0002020!2.23e-08!34;UBERON:0002780!2.71e-08!39;UBERON:0001890!2.71e-08!39;UBERON:0006240!2.71e-08!39;UBERON:0003056!9.10e-08!49;UBERON:0002791!3.88e-07!29;UBERON:0003528!3.88e-07!29;UBERON:0001893!3.88e-07!29;UBERON:0000025!4.90e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.98e-12,29;UBERON:0002791,2.98e-12,29;UBERON:0001893,2.98e-12,29;UBERON:0003080,2.36e-11,40;UBERON:0002020,2.20e-10,34;UBERON:0002616,8.66e-10,46;UBERON:0000955,1.44e-09,47;UBERON:0006238,1.44e-09,47;UBERON:0003056,3.78e-09,49;UBERON:0002780,5.43e-09,39;UBERON:0001890,5.43e-09,39;UBERON:0006240,5.43e-09,39;UBERON:0000956,6.26e-09,21;UBERON:0001869,6.26e-09,21;UBERON:0000203,6.26e-09,21;UBERON:0001049,1.40e-08,52;UBERON:0005068,1.40e-08,52;UBERON:0006241,1.40e-08,52;UBERON:0007135,1.40e-08,52;UBERON:0002259,1.47e-08,1;UBERON:0002314,1.47e-08,1;UBERON:0004061,1.47e-08,1;UBERON:0006777,1.47e-08,1;UBERON:0005882,1.47e-08,1;UBERON:0002394,1.74e-08,1;UBERON:0001281,1.74e-08,1;UBERON:0000353,1.74e-08,1;UBERON:0003497,1.74e-08,1;UBERON:0003909,1.74e-08,1;UBERON:0003928,1.74e-08,1;UBERON:0003835,1.74e-08,1;UBERON:0003513,1.74e-08,1;UBERON:0001280,1.74e-08,1;UBERON:0004647,1.74e-08,1;UBERON:0002294,1.74e-08,1;UBERON:0001173,1.74e-08,1;UBERON:0004912,1.74e-08,1;UBERON:0005171,1.74e-08,1;UBERON:0002950,2.67e-08,4;UBERON:0001891,2.67e-08,4;UBERON:0009616,2.67e-08,4;UBERON:0010286,2.67e-08,4;UBERON:0000073,3.08e-08,54;UBERON:0002619,2.60e-07,17;UBERON:0002346,7.71e-07,64;UBERON:0003075,7.71e-07,64;UBERON:0007284,7.71e-07,64|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.595303031057488,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.436050312760893,0,0,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.191690942036473,0.919218786610021,0,0.510749352340751,0.614426133024974,0.923204014111357,0.457438218012048,0.52091337055676,1.3959149950069,0.56276261003168,0.61119299110724,0.294628585473668,0.854230084794618,0.559198337475902,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.421333260395256,0.340860645156116,0,0,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0,0,0.22836775943812,0.517875767294343,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0.718890747035522,0.599902730993408,0.762421362438388,1.19832511523858,0.457500602818626,1.88481528169297,1.56441888173049,0.767146371990992,0.41557608911912,0.648965052271031,0.305518091550949,0.373220911830279,0,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0,0.348252166522167,0.61734640922383,0.199034266818493,0.702213187313235,0.51469581422943,0.568326998791185,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.658239399653922,0.32833492815819,0.56748166682099,0.730999937126662,0.439100230582101,0,2.3131894342054,2.57261530948211,0,0.528901133327089,0.426576501070468,0,0.128867461322093,0.201683524623343,0.667134131534611,0,0.474529061544512,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0.379419222745544,0.442830443938806,0,0,0.296452627087149,0,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0.554259570499814,0.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|EntrezGene=67145
|HGNC=
|UniProt=Q9CYG7
|association_with_transcript=49bp_to_ENSMUST00000018466,NM_025996,uc008ntr.1_5end
|description=CAGE_peak_6_at_Tomm34_5end
|id=chr2:163896785..163896788,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000213,1.74e-08,1;CL:0002078,1.74e-08,1;CL:0000115,1.74e-08,1;CL:0002262,1.74e-08,1;CL:1000398,1.74e-08,1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.74e-12!52;UBERON:0005068!2.74e-12!52;UBERON:0006241!2.74e-12!52;UBERON:0007135!2.74e-12!52;UBERON:0000955!6.66e-11!50;UBERON:0006238!6.66e-11!50;UBERON:0002616!1.78e-10!49;UBERON:0001017!2.27e-10!73;UBERON:0005743!2.27e-10!73;UBERON:0000073!1.36e-09!75;UBERON:0001016!1.36e-09!75;UBERON:0000033!1.36e-09!63;UBERON:0002346!5.35e-09!71;UBERON:0003075!5.35e-09!71;UBERON:0007284!5.35e-09!71;UBERON:0003080!7.58e-09!40;UBERON:0002020!2.23e-08!34;UBERON:0002780!2.71e-08!39;UBERON:0001890!2.71e-08!39;UBERON:0006240!2.71e-08!39;UBERON:0003056!9.10e-08!49;UBERON:0002791!3.88e-07!29;UBERON:0003528!3.88e-07!29;UBERON:0001893!3.88e-07!29;UBERON:0000025!4.90e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.98e-12,29;UBERON:0002791,2.98e-12,29;UBERON:0001893,2.98e-12,29;UBERON:0003080,2.36e-11,40;UBERON:0002020,2.20e-10,34;UBERON:0002616,8.66e-10,46;UBERON:0000955,1.44e-09,47;UBERON:0006238,1.44e-09,47;UBERON:0003056,3.78e-09,49;UBERON:0002780,5.43e-09,39;UBERON:0001890,5.43e-09,39;UBERON:0006240,5.43e-09,39;UBERON:0000956,6.26e-09,21;UBERON:0001869,6.26e-09,21;UBERON:0000203,6.26e-09,21;UBERON:0001049,1.40e-08,52;UBERON:0005068,1.40e-08,52;UBERON:0006241,1.40e-08,52;UBERON:0007135,1.40e-08,52;UBERON:0002259,1.47e-08,1;UBERON:0002314,1.47e-08,1;UBERON:0004061,1.47e-08,1;UBERON:0006777,1.47e-08,1;UBERON:0005882,1.47e-08,1;UBERON:0002394,1.74e-08,1;UBERON:0001281,1.74e-08,1;UBERON:0000353,1.74e-08,1;UBERON:0003497,1.74e-08,1;UBERON:0003909,1.74e-08,1;UBERON:0003928,1.74e-08,1;UBERON:0003835,1.74e-08,1;UBERON:0003513,1.74e-08,1;UBERON:0001280,1.74e-08,1;UBERON:0004647,1.74e-08,1;UBERON:0002294,1.74e-08,1;UBERON:0001173,1.74e-08,1;UBERON:0004912,1.74e-08,1;UBERON:0005171,1.74e-08,1;UBERON:0002950,2.67e-08,4;UBERON:0001891,2.67e-08,4;UBERON:0009616,2.67e-08,4;UBERON:0010286,2.67e-08,4;UBERON:0000073,3.08e-08,54;UBERON:0002619,2.60e-07,17;UBERON:0002346,7.71e-07,64;UBERON:0003075,7.71e-07,64;UBERON:0007284,7.71e-07,64
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.595303031057488,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.436050312760893,0,0,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.191690942036473,0.919218786610021,0,0.510749352340751,0.614426133024974,0.923204014111357,0.457438218012048,0.52091337055676,1.3959149950069,0.56276261003168,0.61119299110724,0.294628585473668,0.854230084794618,0.559198337475902,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.421333260395256,0.340860645156116,0,0,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0,0,0.22836775943812,0.517875767294343,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0.718890747035522,0.599902730993408,0.762421362438388,1.19832511523858,0.457500602818626,1.88481528169297,1.56441888173049,0.767146371990992,0.41557608911912,0.648965052271031,0.305518091550949,0.373220911830279,0,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0,0.348252166522167,0.61734640922383,0.199034266818493,0.702213187313235,0.51469581422943,0.568326998791185,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.658239399653922,0.32833492815819,0.56748166682099,0.730999937126662,0.439100230582101,0,2.3131894342054,2.57261530948211,0,0.528901133327089,0.426576501070468,0,0.128867461322093,0.201683524623343,0.667134131534611,0,0.474529061544512,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0.379419222745544,0.442830443938806,0,0,0.296452627087149,0,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,0.637819074629948,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0,0.481651769963376,0.35163505977661,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0.857348140126369,0.177340233642274,0.713475270408282,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0.361877549568935,0,0.164140899745061,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0.376736914009382,0,0,0.339956859987711,0.139951452323658,0.829199842826543,0,0.632671987162271,0.203319467126849,0.324016022465404,0.627264888043406,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,0.56369293868419,0,0.165458490457098,0.777804753376191,0.387479470433193,0.675824501963113,0.469428954583016,0.651021924219751,0.943734099831398,0.483168241652012,0,0.316011120628178,0,0,0,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.403304740547362,0.0974578807397524,0.192423683280659,0.233753804363138,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,1.14579102687879,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.17230640686684,0.476293691283074,0.695305955669133,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.355905054372522,0.197008964751127,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.214871054048298,0,0.220591419119515,1.15933917810211
|short_description=p6@Tomm34
}}

Revision as of 22:47, 13 September 2013

Short description:p6@Tomm34
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Tomm34_5end
Coexpression cluster:NA
Association with transcript: 49bp_to_ENSMUST00000018466, NM_025996, uc008ntr.1_5end
EntrezGene:Tomm34
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Tomm34

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lining cell1.74e-081
meso-epithelial cell1.74e-081
endothelial cell1.74e-081
endothelial cell of sinusoid1.74e-081
endothelial cell of hepatic sinusoid1.74e-081

Uber anatomy
Ontology termp-valuen
brain grey matter2.98e-1229
regional part of telencephalon2.98e-1229
telencephalon2.98e-1229
anterior neural tube2.36e-1140
gray matter2.20e-1034
regional part of brain8.66e-1046
brain1.44e-0947
future brain1.44e-0947
pre-chordal neural plate3.78e-0949
regional part of forebrain5.43e-0939
forebrain5.43e-0939
future forebrain5.43e-0939
cerebral cortex6.26e-0921
cerebral hemisphere6.26e-0921
pallium6.26e-0921
neural tube1.40e-0852
neural rod1.40e-0852
future spinal cord1.40e-0852
neural keel1.40e-0852
corpora quadrigemina1.47e-081
midbrain tectum1.47e-081
neural tube mantle layer1.47e-081
tectal plate1.47e-081
neural tube alar plate1.47e-081
bile duct1.74e-081
hepatic sinusoid1.74e-081
parenchyma1.74e-081
abdomen blood vessel1.74e-081
sinusoid1.74e-081
digestive system duct1.74e-081
abdominal segment blood vessel1.74e-081
trunk blood vessel1.74e-081
liver parenchyma1.74e-081
liver lobule1.74e-081
biliary system1.74e-081
biliary tree1.74e-081
biliary bud1.74e-081
hepatic duct1.74e-081
regional part of midbrain2.67e-084
midbrain2.67e-084
presumptive midbrain2.67e-084
midbrain neural tube2.67e-084
regional part of nervous system3.08e-0854
regional part of cerebral cortex2.60e-0717
neurectoderm7.71e-0764
neural plate7.71e-0764
presumptive neural plate7.71e-0764







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