FFCP PHASE1:Hg19::chr7:14026097..14026104,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2115|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3490|TSSclassifier=S|UniProt=C9JX69|association_with_transcript=-20bp_to_ENST00000438956_5end|coexpression_cluster_id=C11|description=CAGE_peak_38_at_ETV1_5end|id=chr7:14026097..14026104,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;6.30e-21;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.64e-26!82;UBERON:0001049!3.11e-25!57;UBERON:0005068!3.11e-25!57;UBERON:0006241!3.11e-25!57;UBERON:0007135!3.11e-25!57;UBERON:0005743!1.60e-24!86;UBERON:0002616!2.85e-24!59;UBERON:0000073!7.87e-22!94;UBERON:0001016!7.87e-22!94;UBERON:0000955!6.02e-20!69;UBERON:0006238!6.02e-20!69;UBERON:0003075!7.06e-20!86;UBERON:0007284!7.06e-20!86;UBERON:0002346!7.97e-19!90;UBERON:0007023!1.05e-17!115;UBERON:0004733!2.36e-17!12;UBERON:0002028!2.36e-17!12;UBERON:0007277!2.36e-17!12;UBERON:0004732!5.63e-16!13;UBERON:0002780!1.94e-14!41;UBERON:0001890!1.94e-14!41;UBERON:0006240!1.94e-14!41;UBERON:0003080!4.70e-14!42;UBERON:0003076!9.04e-14!15;UBERON:0003057!9.04e-14!15;UBERON:0001829!3.93e-13!2;UBERON:0004121!5.10e-13!169;UBERON:0000033!1.00e-12!123;UBERON:0000924!1.30e-12!173;UBERON:0006601!1.30e-12!173;UBERON:0002360!3.05e-12!2;UBERON:0000094!3.05e-12!2;UBERON:0007645!3.05e-12!2;UBERON:0002791!4.19e-12!33;UBERON:0000153!5.87e-12!129;UBERON:0007811!5.87e-12!129;UBERON:0001893!1.02e-11!34;UBERON:0002619!1.93e-11!22;UBERON:0002680!5.97e-11!9;UBERON:0001895!5.97e-11!9;UBERON:0010092!5.97e-11!9;UBERON:0000956!5.10e-10!25;UBERON:0000203!5.10e-10!25;UBERON:0001869!5.72e-10!32;UBERON:0002037!7.63e-10!6;UBERON:0006215!7.63e-10!6;UBERON:0002020!2.48e-09!34;UBERON:0003528!2.48e-09!34;UBERON:0001950!2.68e-09!20;UBERON:0003056!4.00e-09!61;UBERON:0001896!1.19e-08!3;UBERON:0005290!1.19e-08!3;UBERON:0010096!1.19e-08!3;UBERON:0000025!1.30e-08!194;UBERON:0002771!1.88e-08!3;UBERON:0004111!7.53e-08!241;UBERON:0001736!1.98e-07!1;UBERON:0006298!1.98e-07!1;UBERON:0001831!2.23e-07!1;UBERON:0001567!2.23e-07!1;UBERON:0008801!2.23e-07!1;UBERON:0002298!5.50e-07!8;UBERON:0001882!6.12e-07!1;UBERON:0005403!6.12e-07!1;UBERON:0001871!6.91e-07!7;UBERON:0002022!7.73e-07!1;UBERON:0001282!8.18e-07!1;UBERON:0009842!8.18e-07!1;UBERON:0003704!8.18e-07!1;UBERON:0001171!8.18e-07!1;UBERON:0001172!8.18e-07!1|ontology_enrichment_uberon_v019=UBERON:0002037;8.14e-60;6!UBERON:0002680;2.91e-40;9!UBERON:0001895;2.91e-40;9!UBERON:0004733;1.81e-30;12!UBERON:0002028;1.81e-30;12!UBERON:0004732;3.33e-28;13!UBERON:0001016;6.30e-12;83!UBERON:0000073;2.84e-10;53!UBERON:0002616;2.84e-10;53!UBERON:0001872;3.35e-09;5!UBERON:0001017;1.77e-08;75!UBERON:0000955;4.67e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0004733,1.81e-30,12;UBERON:0002028,1.81e-30,12;UBERON:0007277,1.81e-30,12;UBERON:0004732,3.33e-28,13;UBERON:0003076,1.40e-24,15;UBERON:0003057,1.40e-24,15;UBERON:0001017,1.45e-12,81;UBERON:0000073,1.98e-12,53;UBERON:0002616,1.98e-12,53;UBERON:0001049,8.22e-12,56;UBERON:0005068,8.22e-12,56;UBERON:0006241,8.22e-12,56;UBERON:0007135,8.22e-12,56;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.66e-10,68;UBERON:0006238,9.66e-10,68;UBERON:0001872,3.49e-09,5;UBERON:0003075,2.59e-08,82;UBERON:0007284,2.59e-08,82;UBERON:0002346,5.87e-08,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5774520895125,5.41838373663001,4.13766666534966,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3490 | |||
|TSSclassifier=S | |||
|UniProt=C9JX69 | |||
|association_with_transcript=-20bp_to_ENST00000438956_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_38_at_ETV1_5end | |||
|id=chr7:14026097..14026104,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.64e-26!82;UBERON:0001049!3.11e-25!57;UBERON:0005068!3.11e-25!57;UBERON:0006241!3.11e-25!57;UBERON:0007135!3.11e-25!57;UBERON:0005743!1.60e-24!86;UBERON:0002616!2.85e-24!59;UBERON:0000073!7.87e-22!94;UBERON:0001016!7.87e-22!94;UBERON:0000955!6.02e-20!69;UBERON:0006238!6.02e-20!69;UBERON:0003075!7.06e-20!86;UBERON:0007284!7.06e-20!86;UBERON:0002346!7.97e-19!90;UBERON:0007023!1.05e-17!115;UBERON:0004733!2.36e-17!12;UBERON:0002028!2.36e-17!12;UBERON:0007277!2.36e-17!12;UBERON:0004732!5.63e-16!13;UBERON:0002780!1.94e-14!41;UBERON:0001890!1.94e-14!41;UBERON:0006240!1.94e-14!41;UBERON:0003080!4.70e-14!42;UBERON:0003076!9.04e-14!15;UBERON:0003057!9.04e-14!15;UBERON:0001829!3.93e-13!2;UBERON:0004121!5.10e-13!169;UBERON:0000033!1.00e-12!123;UBERON:0000924!1.30e-12!173;UBERON:0006601!1.30e-12!173;UBERON:0002360!3.05e-12!2;UBERON:0000094!3.05e-12!2;UBERON:0007645!3.05e-12!2;UBERON:0002791!4.19e-12!33;UBERON:0000153!5.87e-12!129;UBERON:0007811!5.87e-12!129;UBERON:0001893!1.02e-11!34;UBERON:0002619!1.93e-11!22;UBERON:0002680!5.97e-11!9;UBERON:0001895!5.97e-11!9;UBERON:0010092!5.97e-11!9;UBERON:0000956!5.10e-10!25;UBERON:0000203!5.10e-10!25;UBERON:0001869!5.72e-10!32;UBERON:0002037!7.63e-10!6;UBERON:0006215!7.63e-10!6;UBERON:0002020!2.48e-09!34;UBERON:0003528!2.48e-09!34;UBERON:0001950!2.68e-09!20;UBERON:0003056!4.00e-09!61;UBERON:0001896!1.19e-08!3;UBERON:0005290!1.19e-08!3;UBERON:0010096!1.19e-08!3;UBERON:0000025!1.30e-08!194;UBERON:0002771!1.88e-08!3;UBERON:0004111!7.53e-08!241;UBERON:0001736!1.98e-07!1;UBERON:0006298!1.98e-07!1;UBERON:0001831!2.23e-07!1;UBERON:0001567!2.23e-07!1;UBERON:0008801!2.23e-07!1;UBERON:0002298!5.50e-07!8;UBERON:0001882!6.12e-07!1;UBERON:0005403!6.12e-07!1;UBERON:0001871!6.91e-07!7;UBERON:0002022!7.73e-07!1;UBERON:0001282!8.18e-07!1;UBERON:0009842!8.18e-07!1;UBERON:0003704!8.18e-07!1;UBERON:0001171!8.18e-07!1;UBERON:0001172!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.14e-60;6!UBERON:0002680;2.91e-40;9!UBERON:0001895;2.91e-40;9!UBERON:0004733;1.81e-30;12!UBERON:0002028;1.81e-30;12!UBERON:0004732;3.33e-28;13!UBERON:0001016;6.30e-12;83!UBERON:0000073;2.84e-10;53!UBERON:0002616;2.84e-10;53!UBERON:0001872;3.35e-09;5!UBERON:0001017;1.77e-08;75!UBERON:0000955;4.67e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0004733,1.81e-30,12;UBERON:0002028,1.81e-30,12;UBERON:0007277,1.81e-30,12;UBERON:0004732,3.33e-28,13;UBERON:0003076,1.40e-24,15;UBERON:0003057,1.40e-24,15;UBERON:0001017,1.45e-12,81;UBERON:0000073,1.98e-12,53;UBERON:0002616,1.98e-12,53;UBERON:0001049,8.22e-12,56;UBERON:0005068,8.22e-12,56;UBERON:0006241,8.22e-12,56;UBERON:0007135,8.22e-12,56;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.66e-10,68;UBERON:0006238,9.66e-10,68;UBERON:0001872,3.49e-09,5;UBERON:0003075,2.59e-08,82;UBERON:0007284,2.59e-08,82;UBERON:0002346,5.87e-08,86 | |||
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|short_description=p38@ETV1 | |||
}} |
Revision as of 23:33, 13 September 2013
Short description: | p38@ETV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_ETV1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -20bp_to_ENST00000438956_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | C9JX69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
segmental subdivision of hindbrain | 1.81e-30 | 12 |
hindbrain | 1.81e-30 | 12 |
presumptive hindbrain | 1.81e-30 | 12 |
segmental subdivision of nervous system | 3.33e-28 | 13 |
posterior neural tube | 1.40e-24 | 15 |
chordal neural plate | 1.40e-24 | 15 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 1.98e-12 | 53 |
regional part of brain | 1.98e-12 | 53 |
neural tube | 8.22e-12 | 56 |
neural rod | 8.22e-12 | 56 |
future spinal cord | 8.22e-12 | 56 |
neural keel | 8.22e-12 | 56 |
nervous system | 2.13e-11 | 89 |
brain | 9.66e-10 | 68 |
future brain | 9.66e-10 | 68 |
parietal lobe | 3.49e-09 | 5 |
neural plate | 2.59e-08 | 82 |
presumptive neural plate | 2.59e-08 | 82 |
neurectoderm | 5.87e-08 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.