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FFCP PHASE1:Mm9::chr4:133310137..133310152,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=93760|HGNC=|UniProt=|association_with_transcript=-240bp_to_ENSMUST00000138473_5end|description=CAGE_peak_12_at_Arid1a_5end|id=chr4:133310137..133310152,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!5.11e-20!94;UBERON:0007811!1.09e-18!86;UBERON:0000033!4.13e-17!63;UBERON:0003056!3.23e-16!49;UBERON:0002346!1.54e-15!71;UBERON:0003075!1.54e-15!71;UBERON:0007284!1.54e-15!71;UBERON:0000955!5.17e-15!50;UBERON:0006238!5.17e-15!50;UBERON:0001017!1.03e-14!73;UBERON:0005743!1.03e-14!73;UBERON:0001049!1.49e-14!52;UBERON:0005068!1.49e-14!52;UBERON:0006241!1.49e-14!52;UBERON:0007135!1.49e-14!52;UBERON:0002616!2.37e-14!49;UBERON:0000073!1.73e-13!75;UBERON:0001016!1.73e-13!75;UBERON:0003080!6.80e-13!40;UBERON:0002780!1.59e-12!39;UBERON:0001890!1.59e-12!39;UBERON:0006240!1.59e-12!39;UBERON:0004121!7.08e-12!102;UBERON:0000924!7.08e-12!102;UBERON:0006601!7.08e-12!102;UBERON:0002020!5.79e-10!34;UBERON:0002791!2.07e-09!29;UBERON:0003528!2.07e-09!29;UBERON:0001893!2.07e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0003056,7.66e-22,49;UBERON:0002346,3.88e-21,64;UBERON:0003075,3.88e-21,64;UBERON:0007284,3.88e-21,64;UBERON:0000955,8.44e-21,47;UBERON:0006238,8.44e-21,47;UBERON:0002616,8.51e-20,46;UBERON:0003080,1.47e-18,40;UBERON:0001049,3.43e-18,52;UBERON:0005068,3.43e-18,52;UBERON:0006241,3.43e-18,52;UBERON:0007135,3.43e-18,52;UBERON:0002780,5.39e-18,39;UBERON:0001890,5.39e-18,39;UBERON:0006240,5.39e-18,39;UBERON:0000073,5.96e-18,54;UBERON:0010371,1.70e-16,73;UBERON:0001017,4.55e-15,73;UBERON:0003528,1.97e-14,29;UBERON:0002791,1.97e-14,29;UBERON:0001893,1.97e-14,29;UBERON:0001016,2.95e-14,75;UBERON:0004121,1.61e-13,95;UBERON:0000924,1.61e-13,95;UBERON:0006601,1.61e-13,95;UBERON:0002020,2.93e-13,34;UBERON:0010314,2.58e-11,92;UBERON:0000956,1.46e-10,21;UBERON:0001869,1.46e-10,21;UBERON:0000203,1.46e-10,21;UBERON:0002619,2.28e-08,17;UBERON:0002021,3.64e-08,10;UBERON:0000411,3.64e-08,10;UBERON:0001950,3.64e-08,10|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.839396359559449,0,0.645616617207881,0.422366166455,0.70219357896598,0,0.398860794976682,0.513602189793617,0.699363219351979,0.333109761815663,0,0,0.315462165358238,0.548457734422955,0.84877930359606,1.19060606211498,0.595745707205312,0.522399578277871,0,0,1.14846392823004,0,0,0.190023419456374,0.504060259519861,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0.125896817975577,0.101376931219515,0,1.56478268869608,1.09012578190223,0.219686182734472,0,0,0,1.00669563634642,2.90144856804538,1.34437519656986,0.257259436035947,0.286533439938757,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,1.4209602298922,0.599200221036809,1.15265491596466,1.97010263386108,1.08004750665353,1.05162480675691,0.856952953211411,0.883474163806454,1.71487118900936,2.01275489138296,0,1.10115880999389,0.766124028511126,0.768032666281217,3.03338461779446,2.10421580285542,1.04182674111352,0.558365998002762,1.12552522006336,2.13917546887534,0.589257170947335,1.13897344639282,1.4911955666024,0,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0.485300549842228,0.883366073841574,0,0,2.34224637609238,1.67557365450764,0.255457055208591,0.718890747035522,0.599902730993408,0.127070227073065,1.3481157546434,1.37250180845588,2.51308704225729,2.60736480288415,1.79000820131231,1.87009240103604,1.46017136760982,1.32391173005411,0.622034853050465,0.758168275301024,0.841767423545896,2.34216797332867,1.14951052216736,1.0803727788321,1.35634336052144,1.42876648217788,2.17793324484245,0.937017245597288,3.10444044886819,1.29340795759705,1.51284864134255,1.58356011747554,0.657587197282725,0.556094498451196,1.39300866608867,1.02891068203972,0.796137067273973,0.702213187313235,0,0.284163499395593,0.621377317606506,1.40715635988658,0.720248245844059,0.710234206755631,0.983821158737019,1.23413690309903,0.232533944750408,0.536546802799238,0.700592054203017,0,0.32833492815819,0.810688095458557,0.292399974850665,0,0,1.47202963994889,1.85228302282712,0,0.264450566663544,1.70630600428187,0.232236671860439,0.902072229254653,0,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0,0.597423819763102,0.379335801906163,1.94222471436539,1.1270773567308,2.03651327845314,0.775809948670503,0.771494018793504,0.569128834118316,0,0.470996183524124,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0.372140947668503,0,0.252578877947112,0,0,0.5542595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|EntrezGene=93760
|HGNC=
|UniProt=
|association_with_transcript=-240bp_to_ENSMUST00000138473_5end
|description=CAGE_peak_12_at_Arid1a_5end
|id=chr4:133310137..133310152,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!5.11e-20!94;UBERON:0007811!1.09e-18!86;UBERON:0000033!4.13e-17!63;UBERON:0003056!3.23e-16!49;UBERON:0002346!1.54e-15!71;UBERON:0003075!1.54e-15!71;UBERON:0007284!1.54e-15!71;UBERON:0000955!5.17e-15!50;UBERON:0006238!5.17e-15!50;UBERON:0001017!1.03e-14!73;UBERON:0005743!1.03e-14!73;UBERON:0001049!1.49e-14!52;UBERON:0005068!1.49e-14!52;UBERON:0006241!1.49e-14!52;UBERON:0007135!1.49e-14!52;UBERON:0002616!2.37e-14!49;UBERON:0000073!1.73e-13!75;UBERON:0001016!1.73e-13!75;UBERON:0003080!6.80e-13!40;UBERON:0002780!1.59e-12!39;UBERON:0001890!1.59e-12!39;UBERON:0006240!1.59e-12!39;UBERON:0004121!7.08e-12!102;UBERON:0000924!7.08e-12!102;UBERON:0006601!7.08e-12!102;UBERON:0002020!5.79e-10!34;UBERON:0002791!2.07e-09!29;UBERON:0003528!2.07e-09!29;UBERON:0001893!2.07e-09!29
|ontology_enrichment_uberon_v019_2=UBERON:0003056,7.66e-22,49;UBERON:0002346,3.88e-21,64;UBERON:0003075,3.88e-21,64;UBERON:0007284,3.88e-21,64;UBERON:0000955,8.44e-21,47;UBERON:0006238,8.44e-21,47;UBERON:0002616,8.51e-20,46;UBERON:0003080,1.47e-18,40;UBERON:0001049,3.43e-18,52;UBERON:0005068,3.43e-18,52;UBERON:0006241,3.43e-18,52;UBERON:0007135,3.43e-18,52;UBERON:0002780,5.39e-18,39;UBERON:0001890,5.39e-18,39;UBERON:0006240,5.39e-18,39;UBERON:0000073,5.96e-18,54;UBERON:0010371,1.70e-16,73;UBERON:0001017,4.55e-15,73;UBERON:0003528,1.97e-14,29;UBERON:0002791,1.97e-14,29;UBERON:0001893,1.97e-14,29;UBERON:0001016,2.95e-14,75;UBERON:0004121,1.61e-13,95;UBERON:0000924,1.61e-13,95;UBERON:0006601,1.61e-13,95;UBERON:0002020,2.93e-13,34;UBERON:0010314,2.58e-11,92;UBERON:0000956,1.46e-10,21;UBERON:0001869,1.46e-10,21;UBERON:0000203,1.46e-10,21;UBERON:0002619,2.28e-08,17;UBERON:0002021,3.64e-08,10;UBERON:0000411,3.64e-08,10;UBERON:0001950,3.64e-08,10
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.839396359559449,0,0.645616617207881,0.422366166455,0.70219357896598,0,0.398860794976682,0.513602189793617,0.699363219351979,0.333109761815663,0,0,0.315462165358238,0.548457734422955,0.84877930359606,1.19060606211498,0.595745707205312,0.522399578277871,0,0,1.14846392823004,0,0,0.190023419456374,0.504060259519861,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0.125896817975577,0.101376931219515,0,1.56478268869608,1.09012578190223,0.219686182734472,0,0,0,1.00669563634642,2.90144856804538,1.34437519656986,0.257259436035947,0.286533439938757,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,1.4209602298922,0.599200221036809,1.15265491596466,1.97010263386108,1.08004750665353,1.05162480675691,0.856952953211411,0.883474163806454,1.71487118900936,2.01275489138296,0,1.10115880999389,0.766124028511126,0.768032666281217,3.03338461779446,2.10421580285542,1.04182674111352,0.558365998002762,1.12552522006336,2.13917546887534,0.589257170947335,1.13897344639282,1.4911955666024,0,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0.485300549842228,0.883366073841574,0,0,2.34224637609238,1.67557365450764,0.255457055208591,0.718890747035522,0.599902730993408,0.127070227073065,1.3481157546434,1.37250180845588,2.51308704225729,2.60736480288415,1.79000820131231,1.87009240103604,1.46017136760982,1.32391173005411,0.622034853050465,0.758168275301024,0.841767423545896,2.34216797332867,1.14951052216736,1.0803727788321,1.35634336052144,1.42876648217788,2.17793324484245,0.937017245597288,3.10444044886819,1.29340795759705,1.51284864134255,1.58356011747554,0.657587197282725,0.556094498451196,1.39300866608867,1.02891068203972,0.796137067273973,0.702213187313235,0,0.284163499395593,0.621377317606506,1.40715635988658,0.720248245844059,0.710234206755631,0.983821158737019,1.23413690309903,0.232533944750408,0.536546802799238,0.700592054203017,0,0.32833492815819,0.810688095458557,0.292399974850665,0,0,1.47202963994889,1.85228302282712,0,0.264450566663544,1.70630600428187,0.232236671860439,0.902072229254653,0,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0,0.597423819763102,0.379335801906163,1.94222471436539,1.1270773567308,2.03651327845314,0.775809948670503,0.771494018793504,0.569128834118316,0,0.470996183524124,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0.372140947668503,0,0.252578877947112,0,0,0.554259570499814,1.32643988239339,1.30371981153621,0.339490171550376,0.704070744865506,1.17254380209271,0.714130922658041,0.390267295715598,1.26108115284953,1.10732344824387,0.478364305972461,0.655453258862952,1.03610989119537,0.433947175744535,0,0,0,0.827810238914197,0.80275294993896,0.35163505977661,0.327869890753351,0,0.631016438832513,1.56175497718655,0.646270193198397,0.477937595905104,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,3.21321316421807,0.709700426041343,0.890328018336276,1.79175655288934,0.494910368917606,0,1.21390318077491,1.209294227859,0.754420319023592,0.590603785761546,0,0.775284879504663,1.45413491791002,0.356497378384721,1.8962205476149,0,0,1.02131881726136,2.34079422240703,2.06973894052407,1.07168517515796,0.532020700926821,1.42695054081656,0.987294123612726,1.8267896946876,0.469343416127421,0,0.220528398054962,0.32977250588296,0.645857706783622,0.542816324353403,0.238744688006273,0.492422699235184,0,0.556275906031529,0.854354403989263,1.03193433981611,0.555583582109135,0.376736914009382,0,0.686334519619568,1.01987057996313,0.839708713941948,0.138199973804424,0,0.949007980743406,1.21991680276109,0.432021363287205,0.627264888043406,0.436725127492355,0.539457385539283,0.909188012978695,0,0.129614973291793,0.621339313086926,0,0.598066184175915,0.165458490457098,0.972255941720238,0.258319646955462,0.337912250981556,1.05621514781179,1.8228613878153,1.36317147753424,0.483168241652012,0.288030006257865,3.16011120628178,1.41907650703115,1.43795340030758,1.42912905275575,1.25318686967237,0.993406773906324,1.08175904567972,1.18151621739662,1.31256384932592,2.362411006305,2.41982844328417,1.36441033035653,1.53938946624527,1.28564592399726,0,0.221985953374065,0.179427713218951,0,0.386379188064381,0.187682475451182,0.549454872801795,0.643105137237198,1.00314420807073,2.25900737046827,4.14292712856459,2.86447756719698,1.71853182343688,0.685082519770642,1.5107877947794,2.02506750069542,1.80128481289688,2.26571204492102,3.10656187051092,1.14166082342594,1.19707462020309,0.682934423016537,0.486213434136588,1.25767897576789,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.280924522409647,0.768301828858431,0.861532034334199,0.476293691283074,0.347652977834566,1.15745532278223,0.824171801606613,0,1.02860775715625,0.532427418478012,0.953744759789284,0.872078499793971,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.679020569229309,1.12228454331548,1.06771516311757,0.591026894253381,0.818462086339379,0.619747364743864,1.15743966588685,0.499621155875892,0.467863216890817,0.644613162144895,1.3390183244819,0.220591419119515,0.695603506861264
|short_description=p12@Arid1a
}}

Revision as of 04:02, 14 September 2013

Short description:p12@Arid1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_12_at_Arid1a_5end
Coexpression cluster:NA
Association with transcript: -240bp_to_ENSMUST00000138473_5end
EntrezGene:Arid1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p12@Arid1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate7.66e-2249
neurectoderm3.88e-2164
neural plate3.88e-2164
presumptive neural plate3.88e-2164
brain8.44e-2147
future brain8.44e-2147
regional part of brain8.51e-2046
anterior neural tube1.47e-1840
neural tube3.43e-1852
neural rod3.43e-1852
future spinal cord3.43e-1852
neural keel3.43e-1852
regional part of forebrain5.39e-1839
forebrain5.39e-1839
future forebrain5.39e-1839
regional part of nervous system5.96e-1854
ecto-epithelium1.70e-1673
central nervous system4.55e-1573
brain grey matter1.97e-1429
regional part of telencephalon1.97e-1429
telencephalon1.97e-1429
nervous system2.95e-1475
ectoderm-derived structure1.61e-1395
ectoderm1.61e-1395
presumptive ectoderm1.61e-1395
gray matter2.93e-1334
structure with developmental contribution from neural crest2.58e-1192
cerebral cortex1.46e-1021
cerebral hemisphere1.46e-1021
pallium1.46e-1021
regional part of cerebral cortex2.28e-0817
occipital lobe3.64e-0810
visual cortex3.64e-0810
neocortex3.64e-0810







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