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FFCP PHASE1:Mm9::chr5:67009875..67009950,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11787|HGNC=|MCL_coexpression_id=780|UniProt=E9QPX0,E0CYY8,Q9DBR4,Q3TIZ5,E0CYJ4,P70415|association_with_transcript=0bp_to_ENSMUST00000087256,ENSMUST00000159847,ENSMUST00000160103,ENSMUST00000160185,ENSMUST00000160870,ENSMUST00000161936,ENSMUST00000162349,ENSMUST00000162382,ENSMUST00000162401,NM_009686_5end|description=CAGE_peak_1_at_Apbb2_5end|id=chr5:67009875..67009950,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.41e-13!333;UBERON:0004121!1.12e-10!102;UBERON:0000924!1.12e-10!102;UBERON:0006601!1.12e-10!102;UBERON:0002346!2.94e-10!71;UBERON:0003075!2.94e-10!71;UBERON:0007284!2.94e-10!71;UBERON:0000922!1.00e-09!328;UBERON:0000073!1.31e-09!75;UBERON:0001016!1.31e-09!75;UBERON:0001017!1.32e-09!73;UBERON:0005743!1.32e-09!73;UBERON:0001049!2.05e-09!52;UBERON:0005068!2.05e-09!52;UBERON:0006241!2.05e-09!52;UBERON:0007135!2.05e-09!52;UBERON:0000025!2.20e-09!114;UBERON:0000955!9.52e-09!50;UBERON:0006238!9.52e-09!50;UBERON:0002020!1.03e-08!34;UBERON:0002616!1.04e-08!49;UBERON:0004111!2.20e-08!122;UBERON:0000033!8.22e-08!63;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0002791!2.86e-07!29;UBERON:0003528!2.86e-07!29;UBERON:0001893!2.86e-07!29;UBERON:0003056!5.43e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.63e-11,92;UBERON:0004121,2.92e-10,95;UBERON:0000924,2.92e-10,95;UBERON:0006601,2.92e-10,95;UBERON:0000073,3.60e-10,54;UBERON:0002346,5.13e-10,64;UBERON:0003075,5.13e-10,64;UBERON:0007284,5.13e-10,64;UBERON:0010371,7.55e-10,73;UBERON:0001016,1.30e-09,75;UBERON:0001017,1.31e-09,73;UBERON:0001049,2.03e-09,52;UBERON:0005068,2.03e-09,52;UBERON:0006241,2.03e-09,52;UBERON:0007135,2.03e-09,52;UBERON:0000025,2.18e-09,114;UBERON:0002020,1.02e-08,34;UBERON:0004111,2.18e-08,122;UBERON:0000955,1.49e-07,47;UBERON:0006238,1.49e-07,47;UBERON:0002616,1.63e-07,46;UBERON:0002021,1.78e-07,10;UBERON:0000411,1.78e-07,10;UBERON:0001950,1.78e-07,10;UBERON:0003528,2.85e-07,29;UBERON:0002791,2.85e-07,29;UBERON:0001893,2.85e-07,29;UBERON:0003056,5.40e-07,49|phase1_expression=21.9403920533568,6.97950815278722,6.82498859084304,39.3203474698879,36.5653882860833,18.298840638396,21.7259755753839,0,0.985521055061667,0.468129052643987,0.171217968225505,0.159544317990673,0,0.262261207256992,1.66554880907831,1.41732687172878,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,43.0319048164413,0.297872853602656,0.261199789138935,13.759348360233,14.2233754261645,14.3557991028755,10.7690499039769,9.9116767035509,20.7125527207448,22.6827116783938,10.8647950221099,0,0,0,24.2635360591071,21.1117999605285,30.6254034393554,0,0.7813353445238,0,0,0,0,48.2184812846461,48.1540423292694,39.6460984669232,28.9484797408774,13.5175596955877,8.5677611266444,17.3042610176112,26.3174472655682,18.6878333674463,0.167782606057736,0,0,51.1946277711534,47.2780175898949,55.1769138736863,61.3018876404581,66.1238724090041,60.213983333087,15.5868484751801,23.1216646988896,22.497492932035,33.6214563272771,24.8668040231135,18.5752068521411,14.2160772968975,33.4917447756383,28.7562648646501,31.3384192413559,49.417620301858,49.4745531731614,41.8918533315143,30.5747052548174,59.7492211296514,79.2834343195599,67.4189145089791,76.8032666281217,69.2403010583518,59.9244065595783,45.8403766089949,58.9076127892914,56.276261003168,53.6321849696604,71.3001176846276,72.0400704843461,65.7990043763311,32.9408940999351,49.9528012305852,144.352515373436,26.673140186423,13.599426674155,13.4925797909454,22.7421746106684,33.1539896452028,19.9431076587088,30.1661670963162,22.0818103912438,21.2003744706204,15.9153064347649,52.6138557398703,81.5376767061266,78.2173373468664,44.1641723662877,38.7640594176901,29.3204178108574,26.3764762151029,29.2599808521304,69.9162474995325,26.3697696684527,44.7564253118848,37.5903260527375,39.7907771058924,71.7291113527799,34.4326460243311,48.2030187082029,50.754374278889,7.96149496754887,30.2504009401655,19.654895142975,24.2437626567611,48.4618579167118,102.18049815703,87.9676168616511,38.3185582812887,0.718890747035522,0.599902730993408,0.762421362438388,86.7287802153923,91.0426199609067,46.366455929647,96.2986733865212,76.2032062844385,77.7127286652755,77.8758062725237,44.4019626387379,30.4797077994728,30.8321765289083,46.7180920067972,29.5373405525337,20.2313851901456,39.2535442975661,40.2381863621359,57.7629877794773,63.92874642214,51.3485450587314,64.6758426847539,35.1375828480533,55.2189754090032,63.3424046990216,36.3864915829774,58.6679695866012,53.9790858109358,48.3588020558667,26.2725232200411,0.702213187313235,0.257347907114715,1.42081749697796,34.7971297859643,28.3776532577126,29.3501160181454,46.4019681747012,38.7625536542386,35.7899701898718,36.0427614363132,41.8506506183406,43.3199420182199,42.9501208274184,66.8161578801918,81.5552224031309,63.1583945677436,61.2544821662031,67.3716222177066,78.4381508144195,54.9510630105379,25.77266507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|EntrezGene=11787
|HGNC=
|MCL_coexpression_id=780
|UniProt=E9QPX0,E0CYY8,Q9DBR4,Q3TIZ5,E0CYJ4,P70415
|association_with_transcript=0bp_to_ENSMUST00000087256,ENSMUST00000159847,ENSMUST00000160103,ENSMUST00000160185,ENSMUST00000160870,ENSMUST00000161936,ENSMUST00000162349,ENSMUST00000162382,ENSMUST00000162401,NM_009686_5end
|description=CAGE_peak_1_at_Apbb2_5end
|id=chr5:67009875..67009950,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!3.41e-13!333;UBERON:0004121!1.12e-10!102;UBERON:0000924!1.12e-10!102;UBERON:0006601!1.12e-10!102;UBERON:0002346!2.94e-10!71;UBERON:0003075!2.94e-10!71;UBERON:0007284!2.94e-10!71;UBERON:0000922!1.00e-09!328;UBERON:0000073!1.31e-09!75;UBERON:0001016!1.31e-09!75;UBERON:0001017!1.32e-09!73;UBERON:0005743!1.32e-09!73;UBERON:0001049!2.05e-09!52;UBERON:0005068!2.05e-09!52;UBERON:0006241!2.05e-09!52;UBERON:0007135!2.05e-09!52;UBERON:0000025!2.20e-09!114;UBERON:0000955!9.52e-09!50;UBERON:0006238!9.52e-09!50;UBERON:0002020!1.03e-08!34;UBERON:0002616!1.04e-08!49;UBERON:0004111!2.20e-08!122;UBERON:0000033!8.22e-08!63;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0002791!2.86e-07!29;UBERON:0003528!2.86e-07!29;UBERON:0001893!2.86e-07!29;UBERON:0003056!5.43e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.63e-11,92;UBERON:0004121,2.92e-10,95;UBERON:0000924,2.92e-10,95;UBERON:0006601,2.92e-10,95;UBERON:0000073,3.60e-10,54;UBERON:0002346,5.13e-10,64;UBERON:0003075,5.13e-10,64;UBERON:0007284,5.13e-10,64;UBERON:0010371,7.55e-10,73;UBERON:0001016,1.30e-09,75;UBERON:0001017,1.31e-09,73;UBERON:0001049,2.03e-09,52;UBERON:0005068,2.03e-09,52;UBERON:0006241,2.03e-09,52;UBERON:0007135,2.03e-09,52;UBERON:0000025,2.18e-09,114;UBERON:0002020,1.02e-08,34;UBERON:0004111,2.18e-08,122;UBERON:0000955,1.49e-07,47;UBERON:0006238,1.49e-07,47;UBERON:0002616,1.63e-07,46;UBERON:0002021,1.78e-07,10;UBERON:0000411,1.78e-07,10;UBERON:0001950,1.78e-07,10;UBERON:0003528,2.85e-07,29;UBERON:0002791,2.85e-07,29;UBERON:0001893,2.85e-07,29;UBERON:0003056,5.40e-07,49
|phase1_expression=21.9403920533568,6.97950815278722,6.82498859084304,39.3203474698879,36.5653882860833,18.298840638396,21.7259755753839,0,0.985521055061667,0.468129052643987,0.171217968225505,0.159544317990673,0,0.262261207256992,1.66554880907831,1.41732687172878,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,43.0319048164413,0.297872853602656,0.261199789138935,13.759348360233,14.2233754261645,14.3557991028755,10.7690499039769,9.9116767035509,20.7125527207448,22.6827116783938,10.8647950221099,0,0,0,24.2635360591071,21.1117999605285,30.6254034393554,0,0.7813353445238,0,0,0,0,48.2184812846461,48.1540423292694,39.6460984669232,28.9484797408774,13.5175596955877,8.5677611266444,17.3042610176112,26.3174472655682,18.6878333674463,0.167782606057736,0,0,51.1946277711534,47.2780175898949,55.1769138736863,61.3018876404581,66.1238724090041,60.213983333087,15.5868484751801,23.1216646988896,22.497492932035,33.6214563272771,24.8668040231135,18.5752068521411,14.2160772968975,33.4917447756383,28.7562648646501,31.3384192413559,49.417620301858,49.4745531731614,41.8918533315143,30.5747052548174,59.7492211296514,79.2834343195599,67.4189145089791,76.8032666281217,69.2403010583518,59.9244065595783,45.8403766089949,58.9076127892914,56.276261003168,53.6321849696604,71.3001176846276,72.0400704843461,65.7990043763311,32.9408940999351,49.9528012305852,144.352515373436,26.673140186423,13.599426674155,13.4925797909454,22.7421746106684,33.1539896452028,19.9431076587088,30.1661670963162,22.0818103912438,21.2003744706204,15.9153064347649,52.6138557398703,81.5376767061266,78.2173373468664,44.1641723662877,38.7640594176901,29.3204178108574,26.3764762151029,29.2599808521304,69.9162474995325,26.3697696684527,44.7564253118848,37.5903260527375,39.7907771058924,71.7291113527799,34.4326460243311,48.2030187082029,50.754374278889,7.96149496754887,30.2504009401655,19.654895142975,24.2437626567611,48.4618579167118,102.18049815703,87.9676168616511,38.3185582812887,0.718890747035522,0.599902730993408,0.762421362438388,86.7287802153923,91.0426199609067,46.366455929647,96.2986733865212,76.2032062844385,77.7127286652755,77.8758062725237,44.4019626387379,30.4797077994728,30.8321765289083,46.7180920067972,29.5373405525337,20.2313851901456,39.2535442975661,40.2381863621359,57.7629877794773,63.92874642214,51.3485450587314,64.6758426847539,35.1375828480533,55.2189754090032,63.3424046990216,36.3864915829774,58.6679695866012,53.9790858109358,48.3588020558667,26.2725232200411,0.702213187313235,0.257347907114715,1.42081749697796,34.7971297859643,28.3776532577126,29.3501160181454,46.4019681747012,38.7625536542386,35.7899701898718,36.0427614363132,41.8506506183406,43.3199420182199,42.9501208274184,66.8161578801918,81.5552224031309,63.1583945677436,61.2544821662031,67.3716222177066,78.4381508144195,54.9510630105379,25.7726650727362,29.3540128996534,28.5806255717213,28.5651106388339,39.6911780872047,41.5468060724086,35.1357309274895,31.7676795607974,43.6566736620951,34.4220815373183,32.9249123528353,34.2205131910779,39.7726737723005,40.44687338944,34.3659499300764,40.4256784706365,34.5195579734609,43.5286833043067,69.8787961173099,54.5785558625442,53.1429814839295,64.0340035598608,76.1367906976058,73.0670232499031,61.5435013138189,57.3796812236372,25.791378556582,13.5144535630036,15.9212786041694,10.3436571697033,16.4316698324687,13.5059209461353,16.0414286622294,21.28951417136,17.0241988113787,16.4736847912849,21.5652309791032,28.2827120228063,28.395428253425,28.5414132080236,15.6075749764064,25.5695066322585,93.3003610341354,26.5287976478679,50.193212744144,45.3219379019752,54.682827851221,82.9155974336988,100.93050373567,87.4198742402939,100.57122193975,93.9010284110806,86.743394149673,99.6288953471687,73.7364872567374,85.6322426802548,57.3006878969235,38.0733978673097,26.0635064700089,31.7327258250442,83.1652056136762,69.6237418357687,50.1640932852627,34.8409879542035,35.9679370134533,41.3865068954437,58.8105875810541,28.9152245522588,37.2073785717598,47.273780641735,35.6233417473907,46.4686814078986,51.3874111330481,44.6636629826312,51.808131101018,24.394987702414,44.956800781587,73.9066150916959,69.0274719367807,26.705869977048,24.1858845571801,28.2907619633847,28.0536798236734,41.5037449724302,50.6519454609713,53.4394582331933,51.3356224873999,56.2545429125752,65.3595373164992,51.5677716240934,33.0226417581174,27.1892251987278,24.3194325511578,34.0795885700232,38.3054904667311,38.5276646020472,37.1880786560793,26.1839856238555,50.9237606498251,64.3969495426013,34.4024300965741,89.3683490942822,79.9248912144732,52.0500542129985,45.1227460331856,43.4973384324412,44.0136063311075,93.4543522132969,5.12612642393558,44.3731766120928,41.2983796034457,12.809055076319,6.69801715833023,7.54967971581525,1.5298058699447,1.53946597556024,2.21119958087078,19.0934123603023,31.475431361323,39.2406571554818,31.537559519966,27.1814784818809,24.4566071395719,29.1306988191213,35.8715997847958,19.1081837648342,29.0337540173616,28.5816084019986,2.25477175473676,28.8566933864879,17.5385999884523,20.6118259644691,20.5364119329592,24.4986381961628,34.5030281618517,32.9417093655194,21.6010249516964,7.73069186643219,7.77681016896237,3.16011120628178,13.7853146397312,15.0985107032296,10.5235866612014,7.51912121803422,8.94066096515692,2.88469078847925,4.13530676088816,3.63479219813331,2.43861781295999,2.62148081355785,3.41102582589133,2.02044867444692,2.45441494581295,26.7541852665949,35.7397384932244,20.365045450351,30.7228847946264,61.4342909022366,44.6684291573813,35.7145667321167,31.5121517246227,30.0943262421218,106.173346412009,84.2395182808134,93.3819686906216,66.5071815670071,90.4308926097248,95.1796310711023,93.828127532221,90.5145618480683,103.769611657383,95.2678973623349,28.5415205856486,39.9024873401031,42.8541350442877,44.4885292234978,39.4072745740607,34.1948925717026,55.7839286782054,56.0415355689792,63.8629227087712,49.5286535057043,51.4562978777187,55.6447707088925,46.9143952424111,46.1621348839107,50.7729545567621,44.7716069806089,45.0790027925488,39.9322086359869,47.3898785923803,46.5148587624696,49.3731723434998,39.2221531612136,40.0572799111499,53.0514420707999,52.7012530325851,49.8380040481975,51.2198324043763,45.5110600787468,44.1363369999051,57.7976539807471,53.14848811963,44.1300081042524,46.6523389213446,49.7347260206951,44.7543337476248,53.4594636787204,47.0202532975271,59.9490240794752,48.9698130096239,41.6917782135884,44.0548887678801
|short_description=p1@Apbb2
}}

Revision as of 07:54, 14 September 2013

Short description:p1@Apbb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apbb2_5end
Coexpression cluster:MCL_coexpression_mm9:780
Association with transcript: 0bp_to_ENSMUST00000087256, ENSMUST00000159847, ENSMUST00000160103, ENSMUST00000160185, ENSMUST00000160870, ENSMUST00000161936, ENSMUST00000162349, ENSMUST00000162382, ENSMUST00000162401, NM_009686_5end
EntrezGene:Apbb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apbb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.32
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.30
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.73
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B920.71
Ileum epithelium, pool2.CNhs13232.10253-104C122.68
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F524.26
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F621.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F730.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D848.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D948.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B339.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C151.19
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E147.28
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C555.18
Mouse Granule cells, donor1.CNhs12131.11713-123C361.30
Mouse Granule cells, donor2.CNhs12357.11731-123E366.12
Mouse Granule cells, donor3.CNhs12108.11636-122C760.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.59
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.87
Mouse Microglia, donor1.CNhs12629.11718-123C818.58
Mouse Microglia, donor2.CNhs12634.11736-123E814.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D533.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F149.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D549.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D241.89
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D659.75
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D379.28
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F367.42
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D776.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D469.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F459.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E458.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E556.28
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I653.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F672.04
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E165.80
Mouse Schwann, donor1.CNhs12507.11728-123D932.94
Mouse Schwann, donor2.CNhs12573.11746-123F949.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3144.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F633.15
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.20
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H152.61
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I881.54
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G238.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.32
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.38
accessory axillary lymph node, adult.CNhs10475.1063-29H929.26
adrenal gland, adult.CNhs10508.49-24D769.92
adrenal gland, embryo E14.CNhs11038.406-44C526.37
adrenal gland, embryo E16.CNhs11004.1254-43D644.76
adrenal gland, embryo E17.CNhs11043.1263-45I137.59
adrenal gland, embryo E18.CNhs11026.1262-18F539.79
adrenal gland, neonate N00.CNhs11191.1311-23C171.73
adrenal gland, neonate N25.CNhs11223.1377-27I334.43
amnion, adult pregnant day17.5.CNhs10488.583-22A848.20
aorta, adult.CNhs10498.46-23H150.75
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F530.25
bone (os femoris), neonate N16.CNhs11225.1525-43A619.65
bone (os femoris), neonate N20.CNhs11195.1350-25C324.24
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B2102.18
cerebellum, neonate N30.CNhs11135.1395-42I287.97
colon, adult.CNhs10468.36-18H738.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A486.73
corpus striatum, adult.CNhs10487.19-21D891.04
corpus striatum, neonate N00.CNhs11226.630-43F146.37
cortex, adult.CNhs10473.12-14D596.30
cortex, neonate N30.CNhs11107.1392-42F276.20
diencephalon, adult.CNhs10482.20-12F277.71
diencephalon, neonate N30.CNhs11201.1388-42B277.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B144.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.48
epididymis, adult.CNhs10490.58-23B230.83
eyeball, adult.CNhs10484.31-12G446.72
eyeball, embryo E12.CNhs11016.345-16C629.54
eyeball, embryo E14.CNhs10521.399-16E220.23
eyeball, embryo E15.CNhs10593.426-16C939.25
eyeball, embryo E17.CNhs11023.1261-18D440.24
eyeball, neonate N00.CNhs11207.633-15C657.76
eyeball, neonate N01.CNhs11140.1532-43E763.93
eyeball, neonate N02.CNhs11205.1551-44G851.35
eyeball, neonate N16.CNhs11188.777-19A264.68
forelimb, embryo E11.CNhs10596.335-25E235.14
forelimb, embryo E12.CNhs10600.359-14H255.22
forelimb, embryo E13.CNhs10589.384-1E263.34
forelimb, embryo E14.CNhs10577.413-26A836.39
forelimb, embryo E15.CNhs11007.437-20E758.67
forelimb, embryo E17.CNhs10598.1517-43C453.98
forelimb, embryo E18.CNhs11008.1520-43B548.36
gonad, embryo E13.CNhs11044.1564-45I626.27
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E934.80
heart, embryo E12.CNhs11015.353-12F528.38
heart, embryo E13.CNhs11013.376-3I929.35
heart, embryo E14.CNhs10597.403-26D446.40
heart, embryo E15.CNhs11017.431-16C838.76
heart, embryo E16.CNhs11021.457-17C635.79
heart, embryo E17.CNhs11025.479-18E536.04
heart, embryo E18.CNhs11030.1283-20G341.85
heart, neonate N00.CNhs11213.639-21E343.32
heart, neonate N03.CNhs11221.1349-25I242.95
heart, neonate N10.CNhs11118.749-24G166.82
heart, neonate N16.CNhs11209.782-15G181.56
heart, neonate N20.CNhs11127.821-26I663.16
heart, neonate N25.CNhs11196.1351-25D361.25
heart, neonate N30.CNhs11202.1390-42D267.37
hippocampus, adult.CNhs10478.13-16E878.44
hippocampus, neonate N00.CNhs11228.627-43G154.95
intestinal mucosa, adult.CNhs10506.860-29I325.77
intestine, adult.CNhs10496.178-9A329.35
intestine, embryo E12.CNhs11019.1251-16I528.58
intestine, embryo E13.CNhs11010.381-16D528.57
intestine, embryo E15.CNhs10602.976-16D839.69
intestine, embryo E16.CNhs10585.463-22H441.55
intestine, embryo E17.CNhs10582.482-18D335.14
intestine, embryo E18.CNhs10526.1289-20F731.77
intestine, neonate N00.CNhs11126.644-26D143.66
intestine, neonate N01.CNhs11192.1322-23E934.42
intestine, neonate N06.CNhs11102.688-20B832.92
intestine, neonate N07.CNhs11095.720-20F234.22
intestine, neonate N10.CNhs11098.755-23A539.77
intestine, neonate N20.CNhs11187.827-18D140.45
intestine, neonate N25.CNhs11121.1352-25E334.37
intestine, neonate N30.CNhs11131.1384-42G140.43
kidney, embryo E14.CNhs10606.411-4I934.52
kidney, embryo E15.CNhs10997.434-16F843.53
kidney, embryo E16.CNhs10584.464-22A569.88
kidney, embryo E17.CNhs11028.483-18I254.58
kidney, embryo E18.CNhs11001.1288-20C753.14
kidney, neonate N00.CNhs11214.646-21G764.03
kidney, neonate N10.CNhs11206.758-6D576.14
kidney, neonate N20.CNhs11113.832-19I173.07
kidney, neonate N25.CNhs11122.1353-25F361.54
kidney, neonate N30.CNhs11203.1385-42H157.38
liver, adult pregnant day01.CNhs10466.508-5B225.79
liver, embryo E12.CNhs10601.355-15F813.51
liver, embryo E13.CNhs10524.378-3H615.92
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D716.43
liver, embryo E16.CNhs10523.462-17F513.51
liver, embryo E17.CNhs10510.481-18A316.04
liver, embryo E18.CNhs10579.499-43G421.29
liver, neonate N00.CNhs11117.641-24F417.02
liver, neonate N03.CNhs11123.1345-25G216.47
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H228.28
liver, neonate N10.CNhs11115.751-24B928.40
liver, neonate N20.CNhs11220.823-25A328.54
liver, neonate N25.CNhs11198.1368-26H115.61
liver, neonate N30.CNhs11106.1382-42D125.57
lung, adult.CNhs10474.28-22B193.30
lung, embryo E12.CNhs10522.354-16G226.53
lung, embryo E14.CNhs10604.404-26F850.19
lung, embryo E15.CNhs11020.432-17C545.32
lung, embryo E16.CNhs10998.458-17B654.68
lung, embryo E17.CNhs10605.480-44A682.92
lung, embryo E18.CNhs10583.1287-20I6100.93
lung, neonate N00.CNhs11224.640-42C687.42
lung, neonate N06.CNhs11212.683-20E5100.57
lung, neonate N07.CNhs11111.715-19A393.90
lung, neonate N10.CNhs11219.750-23E686.74
lung, neonate N20.CNhs11109.822-18A499.63
lung, neonate N25.CNhs11119.1359-25C773.74
lung, neonate N30.CNhs11133.1394-42H285.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A157.30
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A138.07
mammary gland, adult lactating day02.CNhs10480.595-22B626.06
mammary gland, adult pregnant day19.CNhs10476.588-5H231.73
medulla oblongata, adult.CNhs10477.17-12C283.17
medulla oblongata, neonate N30.CNhs11200.1396-42A369.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C750.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C234.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E135.97
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E241.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E358.81
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D837.21
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D947.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D546.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D651.39
olfactory brain, adult.CNhs10489.18-22I944.66
ovary, adult.CNhs10507.91-2I751.81
ovary, embryo E18.CNhs11040.505-44H724.39
ovary, neonate N00.CNhs11217.1299-22I444.96
oviduct, adult pregnant day01.CNhs10500.988-6G673.91
pancreas, adult.CNhs10486.34-16E469.03
pancreas, embryo E14.CNhs11012.405-44F426.71
pancreas, embryo E15.CNhs11042.1556-45F224.19
pancreas, embryo E16.CNhs11003.460-26E528.29
pancreas, embryo E17.CNhs10599.1558-45G328.05
pancreas, embryo E18.CNhs10580.1535-43I741.50
pancreas, neonate N00.CNhs11105.645-26G950.65
pancreas, neonate N01.CNhs11138.1531-43D753.44
pancreas, neonate N02.CNhs11139.1539-43D851.34
pancreas, neonate N16.CNhs11136.787-43B656.25
pancreas, neonate N25.CNhs11094.1555-45E265.36
pancreas, neonate N30.CNhs11182.1548-44H551.57
pituitary gland, adult.CNhs10493.21-1G833.02
pituitary gland, embryo E12.CNhs11018.346-16E627.19
pituitary gland, embryo E13.CNhs11009.370-44C724.32
pituitary gland, embryo E14.CNhs11037.398-44A534.08
pituitary gland, embryo E15.CNhs10592.427-16B938.31
pituitary gland, embryo E16.CNhs11036.449-43F638.53
pituitary gland, embryo E17.CNhs11039.1265-44F537.19
pituitary gland, neonate N00.CNhs11190.1308-22E926.18
placenta, adult pregnant day10.CNhs10472.539-13I750.92
placenta, adult pregnant day17.CNhs10464.577-18G364.40
prostate, adult.CNhs10470.859-1F834.40
skin, adult.CNhs10492.30-1C389.37
skin, neonate N00.CNhs11124.650-25G479.92
skin, neonate N03.CNhs11215.662-22H352.05
skin, neonate N06.CNhs11097.693-20I545.12
skin, neonate N10.CNhs11108.762-6C443.50
small intestine, neonate N16.CNhs11114.790-21I144.01
spinal cord, adult.CNhs10505.24-13C993.45
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C144.37
spleen, embryo E18.CNhs11011.1271-21F241.30
spleen, neonate N10.CNhs11116.752-24D112.81
spleen, neonate N20.CNhs11112.824-19H16.70
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E331.48
stomach, embryo E15.CNhs10603.1252-16G839.24
stomach, embryo E16.CNhs11022.459-17D431.54
stomach, embryo E17.CNhs11006.1035-18D527.18
stomach, embryo E18.CNhs10999.1286-20C624.46
stomach, neonate N03.CNhs11193.1340-24B829.13
stomach, neonate N07.CNhs11210.718-18A935.87
stomach, neonate N25.CNhs11104.1355-25E419.11
stomach, neonate N30.CNhs11134.1386-42I129.03
submandibular gland, adult.CNhs10469.59-29C128.58
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F528.86
testis, embryo E15.CNhs11034.443-27C517.54
testis, embryo E16.CNhs11033.470-26G520.61
testis, embryo E17.CNhs11029.486-18I520.54
testis, embryo E18.CNhs11027.503-18G524.50
testis, neonate N00.CNhs11189.1300-22B734.50
testis, neonate N07.CNhs11222.726-26I432.94
testis, neonate N10.CNhs11204.763-44D921.60
testis, neonate N20.CNhs11110.839-18H37.73
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I413.79
thymus, embryo E15.CNhs11005.430-45I215.10
thymus, embryo E16.CNhs11002.456-26C510.52
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G48.94
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D32.44
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B426.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H335.74
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.72
urinary bladder, adult.CNhs10481.879-12E461.43
uterus, adult pregnant day19.CNhs10497.590-15F544.67
uterus, adult.CNhs10509.92-27E535.71
vagina, adult.CNhs10502.89-27D531.51
vesicular gland, adult.CNhs10491.51-27F830.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1106.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A284.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A393.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D766.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A490.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A595.18
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A693.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A790.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8103.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A995.27
whole body, embryo E11.CNhs11014.324-5I828.54
whole body, embryo E12.CNhs10587.857-27C939.90
whole body, embryo E13.CNhs10512.372-23H242.85
whole body, embryo E14.5.CNhs10578.420-27D244.49
whole body, embryo E14.CNhs10519.395-14B139.41
whole body, embryo E16.CNhs10514.453-14F234.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G555.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G556.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G563.86
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G549.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G551.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G555.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G546.91
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G546.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G550.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G544.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G545.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G539.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G547.39
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G546.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G549.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G539.22
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G540.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G553.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G552.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G549.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G551.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G545.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G544.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G557.80
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G553.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G544.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G546.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G549.73
whole body, embryo E17.5.CNhs10513.490-9F944.75
whole body, embryo E17.CNhs10517.475-3I553.46
whole body, embryo E18.CNhs10516.493-3B347.02
whole body, neonate N00.CNhs10525.657-19C259.95
whole body, neonate N01.CNhs10576.659-23C648.97
whole body, neonate N06.CNhs10515.692-21D141.69
whole body, neonate N10.CNhs10518.761-6B444.05





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest6.63e-1192
ectoderm-derived structure2.92e-1095
ectoderm2.92e-1095
presumptive ectoderm2.92e-1095
regional part of nervous system3.60e-1054
neurectoderm5.13e-1064
neural plate5.13e-1064
presumptive neural plate5.13e-1064
ecto-epithelium7.55e-1073
nervous system1.30e-0975
central nervous system1.31e-0973
neural tube2.03e-0952
neural rod2.03e-0952
future spinal cord2.03e-0952
neural keel2.03e-0952
tube2.18e-09114
gray matter1.02e-0834
anatomical conduit2.18e-08122
brain1.49e-0747
future brain1.49e-0747
regional part of brain1.63e-0746
occipital lobe1.78e-0710
visual cortex1.78e-0710
neocortex1.78e-0710
brain grey matter2.85e-0729
regional part of telencephalon2.85e-0729
telencephalon2.85e-0729
pre-chordal neural plate5.40e-0749







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