FFCP PHASE1:Hg19::chr9:96717663..96717666,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56033|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=955|TSSclassifier=S|UniProt=Q9HBU1|association_with_transcript=-9bp_to_ENST00000253968_5end|description=CAGE_peak_4_at_BARX1_5end|id=chr9:96717663..96717666,-|ontology_enrichment_celltype=CL:0000153!1.84e-18!9;CL:0000447!1.84e-18!9;CL:0002552!1.36e-14!5;CL:0000667!1.53e-11!6;CL:0000058!1.53e-11!6;CL:0000138!1.53e-11!6;CL:0000327!2.53e-11!14;CL:0002556!5.54e-11!6;CL:0002579!5.01e-09!3;CL:0002615!6.05e-09!3;CL:0000214!9.79e-09!3|ontology_enrichment_celltype_v019=CL:0002552;3.96e-28;5!CL:0000138;1.56e-13;6!CL:0000039;7.26e-12;7!CL:0000586;7.26e-12;7!CL:0000153;3.35e-09;9!CL:0000447;3.35e-09;9|ontology_enrichment_celltype_v019_2=CL:0002552,4.43e-28,5;CL:0000058,1.18e-13,6;CL:0000138,1.18e-13,6;CL:0000039,7.56e-12,7;CL:0000586,7.56e-12,7;CL:0000153,2.79e-09,9;CL:0000447,2.79e-09,9|ontology_enrichment_development_v019=UBERON:0003099;5.53e-10;1!UBERON:0003852;5.53e-10;1!UBERON:0009117;1.86e-08;10!UBERON:0005564;1.86e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000165!1.63e-20!28;UBERON:0000930!1.63e-20!28;UBERON:0004457!5.29e-17!12;UBERON:0000042!5.29e-17!12;UBERON:0003688!2.83e-16!6;UBERON:0002358!2.83e-16!6;UBERON:0003684!2.83e-16!6;UBERON:0001178!2.83e-16!6;UBERON:0001828!3.40e-12!8;UBERON:0001444!7.56e-12!48;UBERON:0004458!1.42e-11!49;UBERON:0001758!5.54e-11!6;UBERON:0003672!5.54e-11!6;UBERON:0000166!7.09e-11!21;UBERON:0006915!9.79e-09!3;UBERON:0002018!9.79e-09!3;UBERON:0002217!9.79e-09!3;UBERON:0007616!9.79e-09!3;UBERON:0000473!2.29e-08!8;UBERON:0003129!2.84e-08!11;UBERON:0002323!3.62e-08!46;UBERON:0000078!4.56e-08!18;UBERON:0000075!6.96e-07!13;UBERON:0005944!6.96e-07!13;UBERON:0004288!6.96e-07!13;UBERON:0003089!6.96e-07!13|ontology_enrichment_uberon_v019=UBERON:0001828;1.08e-17;8!UBERON:0003729;5.67e-11;13!UBERON:0000473;1.90e-10;8!UBERON:0005705;5.53e-10;1!UBERON:0008193;5.53e-10;1!UBERON:0010912;5.53e-10;1!UBERON:0002514;5.53e-10;1!UBERON:0003457;5.53e-10;1!UBERON:0008907;5.53e-10;1!UBERON:0008001;5.53e-10;1!UBERON:0007213;5.53e-10;1!UBERON:0009891;5.53e-10;1!UBERON:0007914;5.53e-10;1!UBERON:0007375;5.53e-10;1!UBERON:0003323;5.53e-10;1!UBERON:0010258;5.53e-10;1!UBERON:0005253;5.53e-10;1!UBERON:0007842;5.53e-10;1!UBERON:0002397;5.53e-10;1!UBERON:0003113;5.53e-10;1!UBERON:0003277;5.53e-10;1!UBERON:0001709;5.53e-10;1!UBERON:0002244;5.53e-10;1!UBERON:0005620;5.53e-10;1!UBERON:0010364;5.53e-10;1!UBERON:0004288;5.53e-10;1!UBERON:0003135;9.90e-08;11!UBERON:0000165;1.21e-07;28!UBERON:0000161;1.49e-07;19!UBERON:0000166;1.49e-07;19!UBERON:0000344;3.50e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.15e-17,8;UBERON:0003729,5.91e-11,13;UBERON:0000473,1.96e-10,8;UBERON:0000165,2.72e-10,29;UBERON:0000930,2.72e-10,29;UBERON:0005705,8.24e-10,1;UBERON:0008193,8.24e-10,1;UBERON:0010912,8.24e-10,1;UBERON:0002514,8.24e-10,1;UBERON:0003457,8.24e-10,1;UBERON:0008907,8.24e-10,1;UBERON:0008001,8.24e-10,1;UBERON:0007213,8.24e-10,1;UBERON:0009891,8.24e-10,1;UBERON:0007914,8.24e-10,1;UBERON:0009292,8.24e-10,1;UBERON:0003099,8.24e-10,1;UBERON:0007375,8.24e-10,1;UBERON:0003323,8.24e-10,1;UBERON:0010258,8.24e-10,1;UBERON:0007842,8.24e-10,1;UBERON:0009494,8.24e-10,1;UBERON:0010042,8.24e-10,1;UBERON:0010045,8.24e-10,1;UBERON:0010259,8.24e-10,1;UBERON:0010359,8.24e-10,1;UBERON:0009526,8.24e-10,1;UBERON:0002397,8.24e-10,1;UBERON:0003113,8.24e-10,1;UBERON:0003277,8.24e-10,1;UBERON:0001709,8.24e-10,1;UBERON:0004066,8.24e-10,1;UBERON:0002244,8.24e-10,1;UBERON:0005620,8.24e-10,1;UBERON:0004362,8.24e-10,1;UBERON:0010364,8.24e-10,1;UBERON:0010046,8.24e-10,1;UBERON:0005868,8.24e-10,1;UBERON:0007238,8.24e-10,1;UBERON:0004288,8.24e-10,1;UBERON:0004068,8.24e-10,1;UBERON:0010334,8.24e-10,1;UBERON:0003852,8.24e-10,1;UBERON:0010253,8.24e-10,1;UBERON:0000166,9.96e-10,22;UBERON:0003135,1.01e-07,11;UBERON:0000344,3.59e-07,20|phase1_expression=0,0,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,1.59331170856906,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02077085627447,2.21101771161182,1.85986406116378,1.18800285728205,0.494533858557114,0,0,0.841680569770331,0.250237039743928,0.277064115484183,0.438977620880838,0,1.20190447125277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0,0.299918973546171,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=955 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBU1 | |||
|association_with_transcript=-9bp_to_ENST00000253968_5end | |||
|description=CAGE_peak_4_at_BARX1_5end | |||
|id=chr9:96717663..96717666,- | |||
|ontology_enrichment_celltype=CL:0000153!1.84e-18!9;CL:0000447!1.84e-18!9;CL:0002552!1.36e-14!5;CL:0000667!1.53e-11!6;CL:0000058!1.53e-11!6;CL:0000138!1.53e-11!6;CL:0000327!2.53e-11!14;CL:0002556!5.54e-11!6;CL:0002579!5.01e-09!3;CL:0002615!6.05e-09!3;CL:0000214!9.79e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002552;3.96e-28;5!CL:0000138;1.56e-13;6!CL:0000039;7.26e-12;7!CL:0000586;7.26e-12;7!CL:0000153;3.35e-09;9!CL:0000447;3.35e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,4.43e-28,5;CL:0000058,1.18e-13,6;CL:0000138,1.18e-13,6;CL:0000039,7.56e-12,7;CL:0000586,7.56e-12,7;CL:0000153,2.79e-09,9;CL:0000447,2.79e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.53e-10;1!UBERON:0003852;5.53e-10;1!UBERON:0009117;1.86e-08;10!UBERON:0005564;1.86e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.63e-20!28;UBERON:0000930!1.63e-20!28;UBERON:0004457!5.29e-17!12;UBERON:0000042!5.29e-17!12;UBERON:0003688!2.83e-16!6;UBERON:0002358!2.83e-16!6;UBERON:0003684!2.83e-16!6;UBERON:0001178!2.83e-16!6;UBERON:0001828!3.40e-12!8;UBERON:0001444!7.56e-12!48;UBERON:0004458!1.42e-11!49;UBERON:0001758!5.54e-11!6;UBERON:0003672!5.54e-11!6;UBERON:0000166!7.09e-11!21;UBERON:0006915!9.79e-09!3;UBERON:0002018!9.79e-09!3;UBERON:0002217!9.79e-09!3;UBERON:0007616!9.79e-09!3;UBERON:0000473!2.29e-08!8;UBERON:0003129!2.84e-08!11;UBERON:0002323!3.62e-08!46;UBERON:0000078!4.56e-08!18;UBERON:0000075!6.96e-07!13;UBERON:0005944!6.96e-07!13;UBERON:0004288!6.96e-07!13;UBERON:0003089!6.96e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;1.08e-17;8!UBERON:0003729;5.67e-11;13!UBERON:0000473;1.90e-10;8!UBERON:0005705;5.53e-10;1!UBERON:0008193;5.53e-10;1!UBERON:0010912;5.53e-10;1!UBERON:0002514;5.53e-10;1!UBERON:0003457;5.53e-10;1!UBERON:0008907;5.53e-10;1!UBERON:0008001;5.53e-10;1!UBERON:0007213;5.53e-10;1!UBERON:0009891;5.53e-10;1!UBERON:0007914;5.53e-10;1!UBERON:0007375;5.53e-10;1!UBERON:0003323;5.53e-10;1!UBERON:0010258;5.53e-10;1!UBERON:0005253;5.53e-10;1!UBERON:0007842;5.53e-10;1!UBERON:0002397;5.53e-10;1!UBERON:0003113;5.53e-10;1!UBERON:0003277;5.53e-10;1!UBERON:0001709;5.53e-10;1!UBERON:0002244;5.53e-10;1!UBERON:0005620;5.53e-10;1!UBERON:0010364;5.53e-10;1!UBERON:0004288;5.53e-10;1!UBERON:0003135;9.90e-08;11!UBERON:0000165;1.21e-07;28!UBERON:0000161;1.49e-07;19!UBERON:0000166;1.49e-07;19!UBERON:0000344;3.50e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.15e-17,8;UBERON:0003729,5.91e-11,13;UBERON:0000473,1.96e-10,8;UBERON:0000165,2.72e-10,29;UBERON:0000930,2.72e-10,29;UBERON:0005705,8.24e-10,1;UBERON:0008193,8.24e-10,1;UBERON:0010912,8.24e-10,1;UBERON:0002514,8.24e-10,1;UBERON:0003457,8.24e-10,1;UBERON:0008907,8.24e-10,1;UBERON:0008001,8.24e-10,1;UBERON:0007213,8.24e-10,1;UBERON:0009891,8.24e-10,1;UBERON:0007914,8.24e-10,1;UBERON:0009292,8.24e-10,1;UBERON:0003099,8.24e-10,1;UBERON:0007375,8.24e-10,1;UBERON:0003323,8.24e-10,1;UBERON:0010258,8.24e-10,1;UBERON:0007842,8.24e-10,1;UBERON:0009494,8.24e-10,1;UBERON:0010042,8.24e-10,1;UBERON:0010045,8.24e-10,1;UBERON:0010259,8.24e-10,1;UBERON:0010359,8.24e-10,1;UBERON:0009526,8.24e-10,1;UBERON:0002397,8.24e-10,1;UBERON:0003113,8.24e-10,1;UBERON:0003277,8.24e-10,1;UBERON:0001709,8.24e-10,1;UBERON:0004066,8.24e-10,1;UBERON:0002244,8.24e-10,1;UBERON:0005620,8.24e-10,1;UBERON:0004362,8.24e-10,1;UBERON:0010364,8.24e-10,1;UBERON:0010046,8.24e-10,1;UBERON:0005868,8.24e-10,1;UBERON:0007238,8.24e-10,1;UBERON:0004288,8.24e-10,1;UBERON:0004068,8.24e-10,1;UBERON:0010334,8.24e-10,1;UBERON:0003852,8.24e-10,1;UBERON:0010253,8.24e-10,1;UBERON:0000166,9.96e-10,22;UBERON:0003135,1.01e-07,11;UBERON:0000344,3.59e-07,20 | |||
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|short_description=p4@BARX1 | |||
}} |
Revision as of 09:52, 14 September 2013
Short description: | p4@BARX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BARX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000253968_5end |
EntrezGene: | BARX1 |
HGNC: | 955 |
UniProt: | Q9HBU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 4.43e-28 | 5 |
chondroblast | 1.18e-13 | 6 |
chondrocyte | 1.18e-13 | 6 |
germ line cell | 7.56e-12 | 7 |
germ cell | 7.56e-12 | 7 |
GAG secreting cell | 2.79e-09 | 9 |
carbohydrate secreting cell | 2.79e-09 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.