FFCP PHASE1:Mm9::chr6:53770443..53770467,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66873|HGNC=|MCL_coexpression_id=20|UniProt=Q9DBY4|association_with_transcript=351bp_to_ENSMUST00000127748,NM_025817,uc009bzk.2_5end|description=CAGE_peak_2_at_Tril_5end|id=chr6:53770443..53770467,-|ontology_enrichment_celltype=CL:0000221!9.64e-08!44;CL:0000133!9.64e-08!44;CL:0002319!1.87e-07!43|ontology_enrichment_celltype_v019_2=CL:0000221,8.39e-08,44;CL:0000133,8.39e-08,44;CL:0002319,1.69e-07,43;CL:0000540,9.16e-07,33;CL:0000047,9.16e-07,33;CL:0000031,9.16e-07,33;CL:0000404,9.16e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.11e-20!102;UBERON:0000924!1.11e-20!102;UBERON:0006601!1.11e-20!102;UBERON:0000073!2.03e-19!75;UBERON:0001016!2.03e-19!75;UBERON:0001017!2.29e-19!73;UBERON:0005743!2.29e-19!73;UBERON:0002346!3.85e-14!71;UBERON:0003075!3.85e-14!71;UBERON:0007284!3.85e-14!71;UBERON:0001049!1.66e-11!52;UBERON:0005068!1.66e-11!52;UBERON:0006241!1.66e-11!52;UBERON:0007135!1.66e-11!52;UBERON:0000955!8.88e-11!50;UBERON:0006238!8.88e-11!50;UBERON:0000033!1.11e-10!63;UBERON:0002616!2.97e-10!49;UBERON:0000468!3.93e-10!333;UBERON:0002020!1.76e-07!34;UBERON:0000922!4.28e-07!328;UBERON:0003076!5.61e-07!12;UBERON:0003057!5.61e-07!12;UBERON:0002021!7.88e-07!10;UBERON:0000411!7.88e-07!10;UBERON:0001950!7.88e-07!10;UBERON:0003056!8.53e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.10e-19,75;UBERON:0001017,2.45e-19,73;UBERON:0004121,1.32e-18,95;UBERON:0000924,1.32e-18,95;UBERON:0006601,1.32e-18,95;UBERON:0010371,2.69e-13,73;UBERON:0002346,1.36e-12,64;UBERON:0003075,1.36e-12,64;UBERON:0007284,1.36e-12,64;UBERON:0000073,2.73e-12,54;UBERON:0001049,4.21e-11,52;UBERON:0005068,4.21e-11,52;UBERON:0006241,4.21e-11,52;UBERON:0007135,4.21e-11,52;UBERON:0000955,1.21e-08,47;UBERON:0006238,1.21e-08,47;UBERON:0010314,2.40e-08,92;UBERON:0002616,3.90e-08,46;UBERON:0002020,1.74e-07,34;UBERON:0003076,2.27e-07,12;UBERON:0003057,2.27e-07,12;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,4.69434806608824,1.09012578190223,0.878744730937887,1.36100929351998,2.65974201088189,5.75010257459886,0,0,0,9.00408026125814,6.01720223871389,0.515672092277442,2.42779753031517,1.05798195854407,2.53532561402472,0,0,0,0,0,8.08920298399693,20.7477884873639,0.103689612308478,0,0.630974884054146,42.2763456917629,37.9893890436775,0.244981598429908,0,0,42.9451935897616,41.6260722157712,47.7716318426917,1.97829431595291,2.74462930807229,1.04182674111352,59.4659787872941,32.0774687718058,31.1708425464693,24.1595440088408,18.2235751422852,3.72798891650601,1.13589289999776,3.92972112555285,1.15945795480671,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,6.05626705039726,0,0,0,0,0,0,1.25602267690966,0.258937883647172,3.11728492036132,8.50078101154066,7.00270600117925,5.99600292865752,2.26083960828934,2.70454026412121,1.38233250462643,0.247194967734374,0.144599356919912,0,2.26473589926373,0,0,1.86391761218122,41.5748731756397,29.5319856606972,0.255457055208591,0,0,0,48.5321671671626,22.4175295381127,3.26701315493447,19.9897968221118,13.2972037811772,45.7133698031032,25.6341195647057,8.24898847187562,1.36847667671102,0.505445516867349,1.26265113531884,2.47228841629137,2.98872735763515,3.42118046630164,1.50704817835715,1.63287597963187,2.17793324484245,2.34254311399322,3.10444044886819,1.94011193639558,5.10586416453112,7.9178005873777,9.86380795924087,10.5657954705727,4.179025998266,1.85203922767149,7.36426787228425,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.946978942340841,0.787056926989615,0.462801338662135,0,0.536546802799238,0.467061369468678,0.493679549740441,1.47750717671186,0.891756905004413,0.877199924551994,0.439100230582101,1.74468344388483,20.6084149592845,3.70456604565424,0,0.793351699990633,1.06644125267617,0.928946687441754,2.06187938115349,1.81515172161008,2.66853652613844,2.47293313946327,0.949058123089023,0.988193728344065,1.25667604400135,2.18852119245266,1.75467678407208,0.898819408654221,0.648414149624083,1.39398891278057,8.53505554288868,8.3401414205102,5.63538678365402,6.51684249105006,9.30971938404604,8.90724912607046,8.15751328902919,2.36176236767363,3.767969468193,3.70191491765402,0,0.500535317148282,0.196558995113203,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,4.61882975416512,4.35830247072115,6.51859905768104,5.26209765903083,6.10194645550105,6.86775655511445,8.09348379012447,3.70753930929818,7.40885177299098,4.20782910332672,7.17546458958692,4.42430949732493,3.7990696010497,3.61622646453779,0,0,2.45882136509518,1.10374698521893,53.6238970559225,43.6027474122996,0,2.7771801992481,9.14973836307144,12.1036010731958,6.24727853425117,10.5146271099123,8.02075226696619,10.4738316391868,14.5731852602962,11.1057226006299,6.32460444714438,23.45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| ||
|EntrezGene=66873 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q9DBY4 | |||
|association_with_transcript=351bp_to_ENSMUST00000127748,NM_025817,uc009bzk.2_5end | |||
|description=CAGE_peak_2_at_Tril_5end | |||
|id=chr6:53770443..53770467,- | |||
|ontology_enrichment_celltype=CL:0000221!9.64e-08!44;CL:0000133!9.64e-08!44;CL:0002319!1.87e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.39e-08,44;CL:0000133,8.39e-08,44;CL:0002319,1.69e-07,43;CL:0000540,9.16e-07,33;CL:0000047,9.16e-07,33;CL:0000031,9.16e-07,33;CL:0000404,9.16e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.11e-20!102;UBERON:0000924!1.11e-20!102;UBERON:0006601!1.11e-20!102;UBERON:0000073!2.03e-19!75;UBERON:0001016!2.03e-19!75;UBERON:0001017!2.29e-19!73;UBERON:0005743!2.29e-19!73;UBERON:0002346!3.85e-14!71;UBERON:0003075!3.85e-14!71;UBERON:0007284!3.85e-14!71;UBERON:0001049!1.66e-11!52;UBERON:0005068!1.66e-11!52;UBERON:0006241!1.66e-11!52;UBERON:0007135!1.66e-11!52;UBERON:0000955!8.88e-11!50;UBERON:0006238!8.88e-11!50;UBERON:0000033!1.11e-10!63;UBERON:0002616!2.97e-10!49;UBERON:0000468!3.93e-10!333;UBERON:0002020!1.76e-07!34;UBERON:0000922!4.28e-07!328;UBERON:0003076!5.61e-07!12;UBERON:0003057!5.61e-07!12;UBERON:0002021!7.88e-07!10;UBERON:0000411!7.88e-07!10;UBERON:0001950!7.88e-07!10;UBERON:0003056!8.53e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.10e-19,75;UBERON:0001017,2.45e-19,73;UBERON:0004121,1.32e-18,95;UBERON:0000924,1.32e-18,95;UBERON:0006601,1.32e-18,95;UBERON:0010371,2.69e-13,73;UBERON:0002346,1.36e-12,64;UBERON:0003075,1.36e-12,64;UBERON:0007284,1.36e-12,64;UBERON:0000073,2.73e-12,54;UBERON:0001049,4.21e-11,52;UBERON:0005068,4.21e-11,52;UBERON:0006241,4.21e-11,52;UBERON:0007135,4.21e-11,52;UBERON:0000955,1.21e-08,47;UBERON:0006238,1.21e-08,47;UBERON:0010314,2.40e-08,92;UBERON:0002616,3.90e-08,46;UBERON:0002020,1.74e-07,34;UBERON:0003076,2.27e-07,12;UBERON:0003057,2.27e-07,12;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,4.69434806608824,1.09012578190223,0.878744730937887,1.36100929351998,2.65974201088189,5.75010257459886,0,0,0,9.00408026125814,6.01720223871389,0.515672092277442,2.42779753031517,1.05798195854407,2.53532561402472,0,0,0,0,0,8.08920298399693,20.7477884873639,0.103689612308478,0,0.630974884054146,42.2763456917629,37.9893890436775,0.244981598429908,0,0,42.9451935897616,41.6260722157712,47.7716318426917,1.97829431595291,2.74462930807229,1.04182674111352,59.4659787872941,32.0774687718058,31.1708425464693,24.1595440088408,18.2235751422852,3.72798891650601,1.13589289999776,3.92972112555285,1.15945795480671,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,6.05626705039726,0,0,0,0,0,0,1.25602267690966,0.258937883647172,3.11728492036132,8.50078101154066,7.00270600117925,5.99600292865752,2.26083960828934,2.70454026412121,1.38233250462643,0.247194967734374,0.144599356919912,0,2.26473589926373,0,0,1.86391761218122,41.5748731756397,29.5319856606972,0.255457055208591,0,0,0,48.5321671671626,22.4175295381127,3.26701315493447,19.9897968221118,13.2972037811772,45.7133698031032,25.6341195647057,8.24898847187562,1.36847667671102,0.505445516867349,1.26265113531884,2.47228841629137,2.98872735763515,3.42118046630164,1.50704817835715,1.63287597963187,2.17793324484245,2.34254311399322,3.10444044886819,1.94011193639558,5.10586416453112,7.9178005873777,9.86380795924087,10.5657954705727,4.179025998266,1.85203922767149,7.36426787228425,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.946978942340841,0.787056926989615,0.462801338662135,0,0.536546802799238,0.467061369468678,0.493679549740441,1.47750717671186,0.891756905004413,0.877199924551994,0.439100230582101,1.74468344388483,20.6084149592845,3.70456604565424,0,0.793351699990633,1.06644125267617,0.928946687441754,2.06187938115349,1.81515172161008,2.66853652613844,2.47293313946327,0.949058123089023,0.988193728344065,1.25667604400135,2.18852119245266,1.75467678407208,0.898819408654221,0.648414149624083,1.39398891278057,8.53505554288868,8.3401414205102,5.63538678365402,6.51684249105006,9.30971938404604,8.90724912607046,8.15751328902919,2.36176236767363,3.767969468193,3.70191491765402,0,0.500535317148282,0.196558995113203,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,4.61882975416512,4.35830247072115,6.51859905768104,5.26209765903083,6.10194645550105,6.86775655511445,8.09348379012447,3.70753930929818,7.40885177299098,4.20782910332672,7.17546458958692,4.42430949732493,3.7990696010497,3.61622646453779,0,0,2.45882136509518,1.10374698521893,53.6238970559225,43.6027474122996,0,2.7771801992481,9.14973836307144,12.1036010731958,6.24727853425117,10.5146271099123,8.02075226696619,10.4738316391868,14.5731852602962,11.1057226006299,6.32460444714438,23.4564560987919,3.40656204499845,12.1084610493734,9.77321756121457,2.63952196756057,0,2.91336763385978,0,1.69744571780308,0,0,1.03371317267288,0.363533729477506,1.42598951353889,0.316036757935816,0,0,3.40439605753788,2.70091641046965,2.06973894052407,1.28602221018955,0.886701168211368,1.24858172321449,0.987294123612726,3.34911444026059,0.23467170806371,0.847328283455281,0.441056796109924,3.79238381765404,3.22928853391811,2.23157822234177,2.38744688006273,1.31312719796049,0,64.8988557036784,0,3.30218988741156,1.11116716421827,0.188368457004691,0,0,0,0,0,0,2.37251995185852,2.03319467126849,1.72808545314882,2.09088296014469,1.52853794622324,0.674321731924103,1.48776220305605,1.57053565190418,1.03691978633434,0.621339313086926,0,8.67195967055077,6.45288112782681,10.5003641705786,9.81614658430756,7.94093789806657,8.9191501370773,3.25510962109875,1.99232754408851,0.241584120826006,0.576060012515731,0.316011120628178,1.21635129174099,0.821687657318618,0.25984164595559,1.07416017400489,0,0.120195449519969,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,2.31827512838629,1.31377732815827,2.93042598827624,0.857473516316263,0.501572104035363,20.3310663342144,13.3494318587081,14.3223878359849,13.9201077698387,22.6077231524312,19.6402413321322,12.8254275044043,14.8605997063993,19.4851235863208,14.497288729051,1.24544817101012,3.59122386060928,3.92687293234509,3.40349403895612,1.67690530102386,1.2869045591501,2.22246727801615,3.7086310303001,2.24643446714271,1.26348605881899,4.05566879824384,2.64076877940507,1.96647165686753,3.20125762024346,2.5845961030026,1.90517476513229,3.1288768005111,2.31491064556446,4.94503080963968,3.67997300335993,0.342869252385415,2.8396128985494,3.09967046931517,2.18019624948493,2.1645157495526,2.45382362885862,2.92684756596436,4.20911538300549,3.25929873230068,2.80571135828869,3.2031454893527,2.26560309463796,2.45538625901814,2.16911577660352,2.70069255373598,3.99696924700713,1.63752125911786,3.86767897286937,2.48674831689496,4.41182838239031,2.78241402744506 | |||
|short_description=p2@Tril | |||
}} |
Revision as of 10:19, 14 September 2013
Short description: | p2@Tril |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tril_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 351bp_to_ENSMUST00000127748, NM_025817, uc009bzk.2_5end |
EntrezGene: | Tril |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.39e-08 | 44 |
neurectodermal cell | 8.39e-08 | 44 |
neural cell | 1.69e-07 | 43 |
neuron | 9.16e-07 | 33 |
neuronal stem cell | 9.16e-07 | 33 |
neuroblast | 9.16e-07 | 33 |
electrically signaling cell | 9.16e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.10e-19 | 75 |
central nervous system | 2.45e-19 | 73 |
ectoderm-derived structure | 1.32e-18 | 95 |
ectoderm | 1.32e-18 | 95 |
presumptive ectoderm | 1.32e-18 | 95 |
ecto-epithelium | 2.69e-13 | 73 |
neurectoderm | 1.36e-12 | 64 |
neural plate | 1.36e-12 | 64 |
presumptive neural plate | 1.36e-12 | 64 |
regional part of nervous system | 2.73e-12 | 54 |
neural tube | 4.21e-11 | 52 |
neural rod | 4.21e-11 | 52 |
future spinal cord | 4.21e-11 | 52 |
neural keel | 4.21e-11 | 52 |
brain | 1.21e-08 | 47 |
future brain | 1.21e-08 | 47 |
structure with developmental contribution from neural crest | 2.40e-08 | 92 |
regional part of brain | 3.90e-08 | 46 |
gray matter | 1.74e-07 | 34 |
posterior neural tube | 2.27e-07 | 12 |
chordal neural plate | 2.27e-07 | 12 |
occipital lobe | 3.26e-07 | 10 |
visual cortex | 3.26e-07 | 10 |
neocortex | 3.26e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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