FFCP PHASE1:Mm9::chr9:27993024..27993049,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:27993024..27993049,+|id=chr9:27993024..27993049,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.98e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.55e-15!10;UBERON:0000411!1.55e-15!10;UBERON:0001950!1.55e-15!10;UBERON:0001049!3.71e-13!52;UBERON:0005068!3.71e-13!52;UBERON:0006241!3.71e-13!52;UBERON:0007135!3.71e-13!52;UBERON:0000955!9.28e-13!50;UBERON:0006238!9.28e-13!50;UBERON:0000956!2.12e-12!21;UBERON:0001869!2.12e-12!21;UBERON:0000203!2.12e-12!21;UBERON:0002020!2.97e-12!34;UBERON:0002619!8.51e-12!17;UBERON:0002616!8.68e-12!49;UBERON:0001017!1.16e-11!73;UBERON:0005743!1.16e-11!73;UBERON:0007811!2.40e-11!86;UBERON:0000153!2.68e-11!94;UBERON:0000033!3.69e-11!63;UBERON:0000073!4.15e-11!75;UBERON:0001016!4.15e-11!75;UBERON:0002791!1.72e-10!29;UBERON:0003528!1.72e-10!29;UBERON:0001893!1.72e-10!29;UBERON:0002346!7.11e-10!71;UBERON:0003075!7.11e-10!71;UBERON:0007284!7.11e-10!71;UBERON:0003080!1.84e-09!40;UBERON:0004121!7.06e-09!102;UBERON:0000924!7.06e-09!102;UBERON:0006601!7.06e-09!102;UBERON:0002780!1.37e-08!39;UBERON:0001890!1.37e-08!39;UBERON:0006240!1.37e-08!39;UBERON:0003056!2.81e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.99e-36,10;UBERON:0000411,3.99e-36,10;UBERON:0001950,3.99e-36,10;UBERON:0002619,1.73e-27,17;UBERON:0000956,3.65e-22,21;UBERON:0001869,3.65e-22,21;UBERON:0000203,3.65e-22,21;UBERON:0002020,6.42e-21,34;UBERON:0001049,3.12e-16,52;UBERON:0005068,3.12e-16,52;UBERON:0006241,3.12e-16,52;UBERON:0007135,3.12e-16,52;UBERON:0003528,6.61e-16,29;UBERON:0002791,6.61e-16,29;UBERON:0001893,6.61e-16,29;UBERON:0000073,1.34e-15,54;UBERON:0000955,6.22e-15,47;UBERON:0006238,6.22e-15,47;UBERON:0003080,2.71e-14,40;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0002346,5.08e-13,64;UBERON:0003075,5.08e-13,64;UBERON:0007284,5.08e-13,64;UBERON:0002616,2.47e-12,46;UBERON:0002780,1.12e-11,39;UBERON:0001890,1.12e-11,39;UBERON:0006240,1.12e-11,39;UBERON:0003056,1.57e-11,49;UBERON:0010371,2.68e-11,73;UBERON:0002257,1.98e-10,3;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0010314,9.32e-09,92;UBERON:0002259,2.89e-08,1;UBERON:0002314,2.89e-08,1;UBERON:0004061,2.89e-08,1;UBERON:0006777,2.89e-08,1;UBERON:0005882,2.89e-08,1;UBERON:0000025,7.40e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0.763991238884051,1.47314292736834,1.28134512719193,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.19832511523858,0,0.251308704225729,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0,0.39736270956253,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,4.51801474093653,0.460325236507177,2.86447756719698,7.21783365843488,0.685082519770642,1.5107877947794,4.72515750162264,1.35096360967266,3.17199686288943,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.37456602987953,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p@chr9:27993024..27993049,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:27993024..27993049,+ | |||
|id=chr9:27993024..27993049,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.98e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.55e-15!10;UBERON:0000411!1.55e-15!10;UBERON:0001950!1.55e-15!10;UBERON:0001049!3.71e-13!52;UBERON:0005068!3.71e-13!52;UBERON:0006241!3.71e-13!52;UBERON:0007135!3.71e-13!52;UBERON:0000955!9.28e-13!50;UBERON:0006238!9.28e-13!50;UBERON:0000956!2.12e-12!21;UBERON:0001869!2.12e-12!21;UBERON:0000203!2.12e-12!21;UBERON:0002020!2.97e-12!34;UBERON:0002619!8.51e-12!17;UBERON:0002616!8.68e-12!49;UBERON:0001017!1.16e-11!73;UBERON:0005743!1.16e-11!73;UBERON:0007811!2.40e-11!86;UBERON:0000153!2.68e-11!94;UBERON:0000033!3.69e-11!63;UBERON:0000073!4.15e-11!75;UBERON:0001016!4.15e-11!75;UBERON:0002791!1.72e-10!29;UBERON:0003528!1.72e-10!29;UBERON:0001893!1.72e-10!29;UBERON:0002346!7.11e-10!71;UBERON:0003075!7.11e-10!71;UBERON:0007284!7.11e-10!71;UBERON:0003080!1.84e-09!40;UBERON:0004121!7.06e-09!102;UBERON:0000924!7.06e-09!102;UBERON:0006601!7.06e-09!102;UBERON:0002780!1.37e-08!39;UBERON:0001890!1.37e-08!39;UBERON:0006240!1.37e-08!39;UBERON:0003056!2.81e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.99e-36,10;UBERON:0000411,3.99e-36,10;UBERON:0001950,3.99e-36,10;UBERON:0002619,1.73e-27,17;UBERON:0000956,3.65e-22,21;UBERON:0001869,3.65e-22,21;UBERON:0000203,3.65e-22,21;UBERON:0002020,6.42e-21,34;UBERON:0001049,3.12e-16,52;UBERON:0005068,3.12e-16,52;UBERON:0006241,3.12e-16,52;UBERON:0007135,3.12e-16,52;UBERON:0003528,6.61e-16,29;UBERON:0002791,6.61e-16,29;UBERON:0001893,6.61e-16,29;UBERON:0000073,1.34e-15,54;UBERON:0000955,6.22e-15,47;UBERON:0006238,6.22e-15,47;UBERON:0003080,2.71e-14,40;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0002346,5.08e-13,64;UBERON:0003075,5.08e-13,64;UBERON:0007284,5.08e-13,64;UBERON:0002616,2.47e-12,46;UBERON:0002780,1.12e-11,39;UBERON:0001890,1.12e-11,39;UBERON:0006240,1.12e-11,39;UBERON:0003056,1.57e-11,49;UBERON:0010371,2.68e-11,73;UBERON:0002257,1.98e-10,3;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0010314,9.32e-09,92;UBERON:0002259,2.89e-08,1;UBERON:0002314,2.89e-08,1;UBERON:0004061,2.89e-08,1;UBERON:0006777,2.89e-08,1;UBERON:0005882,2.89e-08,1;UBERON:0000025,7.40e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0.763991238884051,1.47314292736834,1.28134512719193,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.19832511523858,0,0.251308704225729,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0,0.39736270956253,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,4.51801474093653,0.460325236507177,2.86447756719698,7.21783365843488,0.685082519770642,1.5107877947794,4.72515750162264,1.35096360967266,3.17199686288943,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.37456602987953,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr9:27993024..27993049,+ | |||
}} |
Revision as of 17:33, 14 September 2013
Short description: | p@chr9:27993024..27993049, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:27993024..27993049, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.98e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.