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FFCP PHASE1:Mm9::chrX:7367139..7367155,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=54645|HGNC=|MCL_coexpression_id=1073|UniProt=|association_with_transcript=0bp_to_ENSMUST00000132456_5end|description=CAGE_peak_2_at_Gripap1_5end|id=chrX:7367139..7367155,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!6.13e-13!50;UBERON:0006238!6.13e-13!50;UBERON:0002616!2.14e-12!49;UBERON:0001049!1.71e-11!52;UBERON:0005068!1.71e-11!52;UBERON:0006241!1.71e-11!52;UBERON:0007135!1.71e-11!52;UBERON:0000033!7.91e-11!63;UBERON:0003080!1.03e-10!40;UBERON:0002346!2.30e-10!71;UBERON:0003075!2.30e-10!71;UBERON:0007284!2.30e-10!71;UBERON:0002780!3.38e-10!39;UBERON:0001890!3.38e-10!39;UBERON:0006240!3.38e-10!39;UBERON:0001017!1.22e-09!73;UBERON:0005743!1.22e-09!73;UBERON:0007811!3.96e-09!86;UBERON:0003056!4.55e-09!49;UBERON:0002791!5.62e-09!29;UBERON:0003528!5.62e-09!29;UBERON:0001893!5.62e-09!29;UBERON:0002020!5.64e-09!34;UBERON:0000073!1.41e-08!75;UBERON:0001016!1.41e-08!75;UBERON:0004121!5.88e-08!102;UBERON:0000924!5.88e-08!102;UBERON:0006601!5.88e-08!102;UBERON:0000153!1.13e-07!94;UBERON:0002021!3.81e-07!10;UBERON:0000411!3.81e-07!10;UBERON:0001950!3.81e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-12,54;UBERON:0001049,1.79e-11,52;UBERON:0005068,1.79e-11,52;UBERON:0006241,1.79e-11,52;UBERON:0007135,1.79e-11,52;UBERON:0000955,2.09e-11,47;UBERON:0006238,2.09e-11,47;UBERON:0002616,6.99e-11,46;UBERON:0003080,1.01e-10,40;UBERON:0002780,3.30e-10,39;UBERON:0001890,3.30e-10,39;UBERON:0006240,3.30e-10,39;UBERON:0001017,1.23e-09,73;UBERON:0002346,3.06e-09,64;UBERON:0003075,3.06e-09,64;UBERON:0007284,3.06e-09,64;UBERON:0003056,4.46e-09,49;UBERON:0003528,5.49e-09,29;UBERON:0002791,5.49e-09,29;UBERON:0001893,5.49e-09,29;UBERON:0002020,5.51e-09,34;UBERON:0001016,1.53e-08,75;UBERON:0010371,2.61e-08,73;UBERON:0002021,3.80e-07,10;UBERON:0000411,3.80e-07,10;UBERON:0001950,3.80e-07,10;UBERON:0004121,6.85e-07,95;UBERON:0000924,6.85e-07,95;UBERON:0006601,6.85e-07,95|phase1_expression=3.04282809499109,2.79180326111489,3.63999391511629,3.93203474698879,6.51164448930251,3.3575854382378,2.10251376535973,3.61545305636414,8.16574588479667,11.0010327371337,8.56089841127525,5.50427897067821,4.45121897821135,4.54586092578786,2.33176833270964,5.87178275430495,2.79824751251259,8.51747846467242,11.3804979892763,8.91218268775863,3.31668831589172,3.27660138962921,3.6567970479451,2.07990149631429,3.21172993494038,1.72269589234506,2.15380998079537,3.01659725760245,1.90023419456374,1.51218077855958,1.10865255327652,0.635030673459631,2.46025915033828,0,1.73310971850765,0.831173226792462,1.02084678131185,13.393012183581,7.813353445238,14.6586648312664,16.4704816648684,13.6609096991689,10.1957174136542,2.64383317748712,2.33166941804883,2.38610777810186,1.56478268869608,0.872100625521786,0.439372365468944,0.777719596297134,0.839918529752175,0,12.5836954543302,5.80289713609076,7.39406358113421,2.57259436035947,1.71920063963254,2.06268836910977,4.04632921719196,2.64495489636016,1.90149421051854,0.338844532069132,0.889294796111139,3.5995988691256,3.9554654502679,1.4209602298922,1.49800055259202,1.53687322128622,3.42175720617976,3.91517221161903,2.3135745748652,3.14216082844184,3.09215957332259,3.1847607795888,3.54628242767475,5.51531271966013,9.91042928994498,8.42736431362239,8.60196586234964,3.56092976871523,3.93396867490361,3.12548022334056,6.97957497503452,5.6276261003168,9.0150966188318,2.94628585473668,3.84403538157578,2.79599168737951,0.908714319998209,1.51143120213571,5.50742528533188,3.44169550792555,0.679971333707751,1.07940638327563,2.59910566979068,2.68816132258401,2.94933282276679,1.87473354835864,1.55871602761721,1.06001872353102,2.39433813620357,2.56652954828636,2.54805239706646,0,0.649473123033642,0.760079596425296,1.01104889002957,2.96878087269556,13.7237078333001,4.75014845007439,2.60227990149204,4.26251669636998,4.38169444786511,2.56228488939458,5.40908052824242,3.26733137457156,1.97755974187499,3.90418263683761,5.30766331169925,2.42650274921114,2.87093973998512,2.90925151881133,1.86391761218122,5.5628351432194,6.0739544975902,3.83185582812887,2.15667224110656,1.19980546198682,1.27070227073065,9.43681028250383,15.0975198930147,4.77486538028885,11.9938780932671,11.5071955798649,7.68815764870372,11.5191296778108,1.93494791315601,3.23458123586242,4.0435641349388,3.36706969418358,2.34216797332867,2.29902104433473,2.34080768746954,1.65775299619287,2.31324097114515,3.07472928683639,2.62364828767241,8.2785078636485,1.5089759505299,1.89106080167819,1.58356011747554,1.53437012699302,2.50242524303038,3.1342694986995,1.64625709126355,2.58744546864041,1.40442637462647,1.28673953557358,3.12579849335152,0.621377317606506,1.87620847984877,2.34080679899319,2.3674473558521,1.77087808572663,0.617068451549513,2.55787339225449,1.3413670069981,3.50296027101508,3.29119699826961,2.46251196118643,2.35099547682982,2.77779976108131,1.75640092232841,1.61047702512446,10.9350773253346,4.93942139420565,5.947538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|EntrezGene=54645
|HGNC=
|MCL_coexpression_id=1073
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000132456_5end
|description=CAGE_peak_2_at_Gripap1_5end
|id=chrX:7367139..7367155,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!6.13e-13!50;UBERON:0006238!6.13e-13!50;UBERON:0002616!2.14e-12!49;UBERON:0001049!1.71e-11!52;UBERON:0005068!1.71e-11!52;UBERON:0006241!1.71e-11!52;UBERON:0007135!1.71e-11!52;UBERON:0000033!7.91e-11!63;UBERON:0003080!1.03e-10!40;UBERON:0002346!2.30e-10!71;UBERON:0003075!2.30e-10!71;UBERON:0007284!2.30e-10!71;UBERON:0002780!3.38e-10!39;UBERON:0001890!3.38e-10!39;UBERON:0006240!3.38e-10!39;UBERON:0001017!1.22e-09!73;UBERON:0005743!1.22e-09!73;UBERON:0007811!3.96e-09!86;UBERON:0003056!4.55e-09!49;UBERON:0002791!5.62e-09!29;UBERON:0003528!5.62e-09!29;UBERON:0001893!5.62e-09!29;UBERON:0002020!5.64e-09!34;UBERON:0000073!1.41e-08!75;UBERON:0001016!1.41e-08!75;UBERON:0004121!5.88e-08!102;UBERON:0000924!5.88e-08!102;UBERON:0006601!5.88e-08!102;UBERON:0000153!1.13e-07!94;UBERON:0002021!3.81e-07!10;UBERON:0000411!3.81e-07!10;UBERON:0001950!3.81e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-12,54;UBERON:0001049,1.79e-11,52;UBERON:0005068,1.79e-11,52;UBERON:0006241,1.79e-11,52;UBERON:0007135,1.79e-11,52;UBERON:0000955,2.09e-11,47;UBERON:0006238,2.09e-11,47;UBERON:0002616,6.99e-11,46;UBERON:0003080,1.01e-10,40;UBERON:0002780,3.30e-10,39;UBERON:0001890,3.30e-10,39;UBERON:0006240,3.30e-10,39;UBERON:0001017,1.23e-09,73;UBERON:0002346,3.06e-09,64;UBERON:0003075,3.06e-09,64;UBERON:0007284,3.06e-09,64;UBERON:0003056,4.46e-09,49;UBERON:0003528,5.49e-09,29;UBERON:0002791,5.49e-09,29;UBERON:0001893,5.49e-09,29;UBERON:0002020,5.51e-09,34;UBERON:0001016,1.53e-08,75;UBERON:0010371,2.61e-08,73;UBERON:0002021,3.80e-07,10;UBERON:0000411,3.80e-07,10;UBERON:0001950,3.80e-07,10;UBERON:0004121,6.85e-07,95;UBERON:0000924,6.85e-07,95;UBERON:0006601,6.85e-07,95
|phase1_expression=3.04282809499109,2.79180326111489,3.63999391511629,3.93203474698879,6.51164448930251,3.3575854382378,2.10251376535973,3.61545305636414,8.16574588479667,11.0010327371337,8.56089841127525,5.50427897067821,4.45121897821135,4.54586092578786,2.33176833270964,5.87178275430495,2.79824751251259,8.51747846467242,11.3804979892763,8.91218268775863,3.31668831589172,3.27660138962921,3.6567970479451,2.07990149631429,3.21172993494038,1.72269589234506,2.15380998079537,3.01659725760245,1.90023419456374,1.51218077855958,1.10865255327652,0.635030673459631,2.46025915033828,0,1.73310971850765,0.831173226792462,1.02084678131185,13.393012183581,7.813353445238,14.6586648312664,16.4704816648684,13.6609096991689,10.1957174136542,2.64383317748712,2.33166941804883,2.38610777810186,1.56478268869608,0.872100625521786,0.439372365468944,0.777719596297134,0.839918529752175,0,12.5836954543302,5.80289713609076,7.39406358113421,2.57259436035947,1.71920063963254,2.06268836910977,4.04632921719196,2.64495489636016,1.90149421051854,0.338844532069132,0.889294796111139,3.5995988691256,3.9554654502679,1.4209602298922,1.49800055259202,1.53687322128622,3.42175720617976,3.91517221161903,2.3135745748652,3.14216082844184,3.09215957332259,3.1847607795888,3.54628242767475,5.51531271966013,9.91042928994498,8.42736431362239,8.60196586234964,3.56092976871523,3.93396867490361,3.12548022334056,6.97957497503452,5.6276261003168,9.0150966188318,2.94628585473668,3.84403538157578,2.79599168737951,0.908714319998209,1.51143120213571,5.50742528533188,3.44169550792555,0.679971333707751,1.07940638327563,2.59910566979068,2.68816132258401,2.94933282276679,1.87473354835864,1.55871602761721,1.06001872353102,2.39433813620357,2.56652954828636,2.54805239706646,0,0.649473123033642,0.760079596425296,1.01104889002957,2.96878087269556,13.7237078333001,4.75014845007439,2.60227990149204,4.26251669636998,4.38169444786511,2.56228488939458,5.40908052824242,3.26733137457156,1.97755974187499,3.90418263683761,5.30766331169925,2.42650274921114,2.87093973998512,2.90925151881133,1.86391761218122,5.5628351432194,6.0739544975902,3.83185582812887,2.15667224110656,1.19980546198682,1.27070227073065,9.43681028250383,15.0975198930147,4.77486538028885,11.9938780932671,11.5071955798649,7.68815764870372,11.5191296778108,1.93494791315601,3.23458123586242,4.0435641349388,3.36706969418358,2.34216797332867,2.29902104433473,2.34080768746954,1.65775299619287,2.31324097114515,3.07472928683639,2.62364828767241,8.2785078636485,1.5089759505299,1.89106080167819,1.58356011747554,1.53437012699302,2.50242524303038,3.1342694986995,1.64625709126355,2.58744546864041,1.40442637462647,1.28673953557358,3.12579849335152,0.621377317606506,1.87620847984877,2.34080679899319,2.3674473558521,1.77087808572663,0.617068451549513,2.55787339225449,1.3413670069981,3.50296027101508,3.29119699826961,2.46251196118643,2.35099547682982,2.77779976108131,1.75640092232841,1.61047702512446,10.9350773253346,4.93942139420565,5.94753809370836,3.96675849995316,2.55945900642281,2.78684006232526,2.57734922644187,2.21851877085677,2.2237804384487,1.90225626112559,2.84717436926707,2.30578536613615,3.2673577144035,2.38747766449381,4.09424582950152,0.898819408654221,2.59365659849633,5.57595565112228,1.13800740571849,1.94222471436539,2.25415471346161,3.46207257337034,2.32742984601151,2.45475369616115,2.84564417059158,3.24742325555125,2.35498091762062,2.09775178667061,2.96452627087149,1.83529616287703,3.14494392181125,1.57403478669398,3.44862206360455,3.37648023653384,3.05551022137704,2.5892652370573,4.05338066937588,1.92192989231657,1.43768206527355,3.34926852901653,2.80833905803104,2.02063102357689,1.79397413521912,4.82443521363367,2.95605104266567,1.51593129416388,0.488894929326078,1.86719594352707,1.17345124144251,3.51763140627813,1.42826184531608,2.73187107000918,2.83743259391144,2.43611158613652,3.02964060449226,3.60499292374624,4.31712454664739,1.88043776155965,7.53956419696361,12.5098307278303,4.42587845717133,2.75936746304733,8.34863067936518,9.49414661396846,1.63934945376675,1.51482556322624,1.26203287766503,2.34263246577983,3.01592756825919,3.10659437338318,1.78238939265915,2.83076530788832,3.23848561339915,4.09158201075837,3.55759000151871,9.96096080907602,2.55492153374884,2.13678724400706,1.95464351224291,3.62934270539578,1.32745138339963,1.45668381692989,2.11626489875326,2.82907619633847,2.36241514304618,4.61152721915891,3.6179961043551,1.09060118843252,3.56497378384721,1.26414703174326,1.05418608574999,3.09406629744561,8.85142974959849,1.26042765821917,2.97524972700335,2.57204442037911,3.3694644392032,5.17269571046005,4.60737257685939,3.34911444026059,1.17335854031855,2.54198485036584,3.96951116498931,3.2977250588296,1.61464426695906,2.11095237248546,1.55184047204077,3.11867709515616,1.7488850197791,7.41701208042039,3.07567585436135,3.50857675537478,3.1483069652851,4.70921142511728,6.28793447516716,5.49067615695654,2.20971958992012,2.79902904647316,1.24379976423981,2.86401185404534,2.37251995185852,1.42323626988794,1.83609079397062,1.46361807210128,3.71216358368502,2.69728692769641,3.14083131756277,1.83229159388821,1.29614973291793,2.4853572523477,0,2.0932316446157,2.31641886639937,1.94451188344048,2.58319646955462,3.04121025883401,2.8165737274981,1.8228613878153,1.57289016638566,1.44950472495604,2.59227005632079,2.52808896502543,2.02725215290164,0.616265742988964,2.07873316764472,2.14832034800978,0.993406773906324,1.9231271923195,2.51072196196781,3.23092639834072,2.13379058634,2.62148081355785,2.72882066071307,3.55983814069219,3.27255326108393,2.94749498699775,1.55390167361845,1.16628013592318,2.18250001273302,2.31827512838629,2.43987218086537,3.29672923681077,1.50057865355346,4.51414893631827,9.03602948187307,11.5081309126794,9.16632821503035,7.73339320546594,7.53590771747707,14.3524840504043,11.4753825039407,9.00642406448441,15.8599843144472,10.3552062350364,1.86817225651518,3.19219898720825,2.04880326904961,3.8897074730927,0.628839487883947,1.47074806760011,1.77797382241292,2.88449080134452,1.28367683836726,3.28506375292937,3.8021894983536,1.88626341386076,2.43467919421694,2.30490548657529,2.87177344778066,1.90517476513229,2.31768651889711,3.47236596834669,2.06042950401653,2.35518272215036,0.685738504770831,3.19456451086807,1.90748951957857,2.90692833264657,3.3879376949519,2.5384382367503,2.74391959309159,2.89376682581627,2.58027816307137,3.36685362994643,3.08451047122853,2.65962102414021,2.45538625901814,2.63392630016142,2.3148793317737,2.49810577937946,2.8071793013449,3.00819475667618,2.10417165275728,1.98532277207564,2.55054619182464
|short_description=p2@Gripap1
}}

Revision as of 20:09, 14 September 2013

Short description:p2@Gripap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gripap1_5end
Coexpression cluster:MCL_coexpression_mm9:1073
Association with transcript: 0bp_to_ENSMUST00000132456_5end
EntrezGene:Gripap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gripap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.38
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H913.72
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C15.41
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B211.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D52.85
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A39.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H32.11
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.61e-1254
neural tube1.79e-1152
neural rod1.79e-1152
future spinal cord1.79e-1152
neural keel1.79e-1152
brain2.09e-1147
future brain2.09e-1147
regional part of brain6.99e-1146
anterior neural tube1.01e-1040
regional part of forebrain3.30e-1039
forebrain3.30e-1039
future forebrain3.30e-1039
central nervous system1.23e-0973
neurectoderm3.06e-0964
neural plate3.06e-0964
presumptive neural plate3.06e-0964
pre-chordal neural plate4.46e-0949
brain grey matter5.49e-0929
regional part of telencephalon5.49e-0929
telencephalon5.49e-0929
gray matter5.51e-0934
nervous system1.53e-0875
ecto-epithelium2.61e-0873
occipital lobe3.80e-0710
visual cortex3.80e-0710
neocortex3.80e-0710
ectoderm-derived structure6.85e-0795
ectoderm6.85e-0795
presumptive ectoderm6.85e-0795







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