FFCP PHASE1:Hg19::chr11:102668148..102668159,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102668148..102668159,+ | |||
|id=chr11:102668148..102668159,+ | |||
|ontology_enrichment_celltype=CL:0000359!4.40e-22!32;CL:0000192!1.06e-17!42;CL:0000514!1.06e-17!42;CL:0000055!7.82e-17!180;CL:0000187!1.07e-12!54;CL:0000057!1.17e-12!75;CL:1000306!7.76e-12!4;CL:0002547!7.76e-12!4;CL:0000680!8.83e-12!57;CL:0000056!8.83e-12!57;CL:0000355!8.83e-12!57;CL:0000183!3.18e-11!59;CL:0000393!5.84e-11!60;CL:0000211!5.84e-11!60;CL:0002494!2.26e-10!16;CL:0002592!5.61e-10!3;CL:0002539!7.06e-10!10;CL:0002582!1.45e-08!3;CL:0000222!2.53e-08!119;CL:0002551!6.07e-08!6;CL:0002620!6.32e-08!23;CL:0000569!1.92e-07!4;CL:0000011!1.92e-07!4;CL:1000413!2.45e-07!9;CL:0002594!8.99e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002592;2.20e-25;3!CL:0000569;4.49e-19;4!CL:1000306;5.90e-19;4!CL:0002547;5.90e-19;4!CL:0002494;1.45e-18;16!CL:0002595;2.02e-15;5!CL:0000359;3.70e-14;32!CL:0000054;2.85e-10;2!CL:0002593;2.85e-10;2!CL:0000137;2.85e-10;2!CL:0000092;2.85e-10;2!CL:0000192;1.28e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.34e-25,3;CL:0000569,5.64e-19,4;CL:0000011,5.64e-19,4;CL:1000306,6.18e-19,4;CL:0002547,6.18e-19,4;CL:0002494,1.66e-18,16;CL:0002595,1.75e-15,5;CL:0000359,2.63e-14,32;CL:0000192,1.14e-10,43;CL:0000514,1.14e-10,43;CL:0002593,2.49e-10,2;CL:0000054,2.72e-10,2;CL:0000137,2.72e-10,2;CL:0000092,2.72e-10,2;CL:0000187,2.37e-08,55;CL:0000680,6.41e-08,58;CL:0000056,6.41e-08,58;CL:0000355,6.41e-08,58;CL:0000393,1.57e-07,61;CL:0000211,1.57e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000011;4.49e-19;4!CL:0000514;1.28e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.56e-19;1!DOID:3165;3.56e-19;1!DOID:0060121;3.56e-19;1!DOID:2438;3.56e-19;1!DOID:4418;3.56e-19;1!DOID:200;2.85e-10;2!DOID:4305;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.25e-19,1;DOID:3165,3.25e-19,1;DOID:0060121,3.25e-19,1;DOID:2438,3.25e-19,1;DOID:4418,3.25e-19,1;DOID:200,2.72e-10,2;DOID:4305,2.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.27e-42!42;UBERON:0003509!2.27e-42!42;UBERON:0004572!2.27e-42!42;UBERON:0004573!2.48e-30!33;UBERON:0004571!2.48e-30!33;UBERON:0001981!1.00e-29!60;UBERON:0007500!1.00e-29!60;UBERON:0004537!1.00e-29!60;UBERON:0006965!1.00e-29!60;UBERON:0004872!5.70e-28!84;UBERON:0000055!7.27e-27!69;UBERON:0002049!2.01e-22!79;UBERON:0007798!2.01e-22!79;UBERON:0004535!1.21e-20!110;UBERON:0003914!7.34e-20!118;UBERON:0001009!7.56e-20!113;UBERON:0000947!4.58e-17!21;UBERON:0010191!4.58e-17!21;UBERON:0004290!4.37e-14!70;UBERON:0000486!1.52e-13!82;UBERON:0000914!1.80e-13!83;UBERON:0002329!1.80e-13!83;UBERON:0003077!1.80e-13!83;UBERON:0003059!1.80e-13!83;UBERON:0007282!1.80e-13!83;UBERON:0009618!1.80e-13!83;UBERON:0007285!1.80e-13!83;UBERON:0000415!7.76e-12!4;UBERON:0007240!7.76e-12!4;UBERON:0005742!7.76e-12!4;UBERON:0005734!7.76e-12!4;UBERON:0004664!7.76e-12!4;UBERON:0004663!7.76e-12!4;UBERON:0000490!4.21e-11!138;UBERON:0001134!1.05e-10!61;UBERON:0002036!1.05e-10!61;UBERON:0003082!1.05e-10!61;UBERON:0002385!3.21e-10!63;UBERON:0001015!3.21e-10!63;UBERON:0000383!3.21e-10!63;UBERON:0001621!5.61e-10!3;UBERON:0004237!7.06e-10!10;UBERON:0004695!7.06e-10!10;UBERON:0002111!7.06e-10!10;UBERON:0004178!7.06e-10!10;UBERON:0003498!1.45e-09!5;UBERON:0005985!1.45e-09!5;UBERON:0004111!2.43e-09!241;UBERON:0005256!9.21e-09!143;UBERON:0000025!1.76e-08!194;UBERON:0002199!1.78e-08!45;UBERON:0002416!1.78e-08!45;UBERON:0000477!4.48e-08!286;UBERON:0000948!5.93e-08!24;UBERON:0005498!5.93e-08!24;UBERON:0004140!5.93e-08!24;UBERON:0009881!5.93e-08!24;UBERON:0004141!5.93e-08!24;UBERON:0003084!5.93e-08!24;UBERON:0007005!5.93e-08!24;UBERON:0004139!5.93e-08!24;UBERON:0004291!5.93e-08!24;UBERON:0000483!5.99e-08!309;UBERON:0000119!9.06e-08!312;UBERON:0003102!1.05e-07!95;UBERON:0003915!2.45e-07!9;UBERON:0004700!2.45e-07!9;UBERON:0001917!2.45e-07!9;UBERON:0002097!3.47e-07!40;UBERON:0003081!6.97e-07!216;UBERON:0007100!7.09e-07!27;UBERON:0000926!8.39e-07!448;UBERON:0004120!8.39e-07!448;UBERON:0006603!8.39e-07!448;UBERON:0001310!8.99e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.27e-26;33!UBERON:0004571;4.27e-26;33!UBERON:0003498;2.20e-25;3!UBERON:0005985;2.20e-25;3!UBERON:0001621;2.20e-25;3!UBERON:0004797;5.90e-19;4!UBERON:0000415;5.90e-19;4!UBERON:0007240;5.90e-19;4!UBERON:0005742;5.90e-19;4!UBERON:0005734;5.90e-19;4!UBERON:0004664;5.90e-19;4!UBERON:0004663;5.90e-19;4!UBERON:0001637;7.47e-19;42!UBERON:0003509;7.47e-19;42!UBERON:0004572;7.47e-19;42!UBERON:0003834;2.02e-15;5!UBERON:0001533;2.02e-15;5!UBERON:0000948;1.30e-13;22!UBERON:0007100;5.08e-12;25!UBERON:0003513;2.69e-11;7!UBERON:0002456;2.85e-10;2!UBERON:0003914;1.35e-08;74!UBERON:0000947;2.51e-08;21!UBERON:0010191;2.51e-08;21!UBERON:0007500;4.74e-07;56!UBERON:0001981;4.74e-07;56!UBERON:0004537;4.74e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.56e-26,33;UBERON:0004571,1.56e-26,33;UBERON:0001621,2.34e-25,3;UBERON:0001637,8.28e-21,42;UBERON:0003509,8.28e-21,42;UBERON:0004572,8.28e-21,42;UBERON:0000415,6.18e-19,4;UBERON:0007240,6.18e-19,4;UBERON:0005742,6.18e-19,4;UBERON:0005734,6.18e-19,4;UBERON:0004664,6.18e-19,4;UBERON:0004663,6.18e-19,4;UBERON:0004872,4.31e-17,83;UBERON:0003498,1.21e-15,5;UBERON:0005985,1.21e-15,5;UBERON:0003834,1.75e-15,5;UBERON:0001533,1.75e-15,5;UBERON:0007500,9.64e-15,59;UBERON:0001981,9.64e-15,59;UBERON:0004537,9.64e-15,59;UBERON:0006965,9.64e-15,59;UBERON:0004535,6.96e-13,109;UBERON:0000055,9.43e-13,68;UBERON:0001009,1.60e-12,112;UBERON:0000948,1.81e-12,24;UBERON:0005498,1.81e-12,24;UBERON:0004140,1.81e-12,24;UBERON:0009881,1.81e-12,24;UBERON:0004141,1.81e-12,24;UBERON:0003084,1.81e-12,24;UBERON:0007005,1.81e-12,24;UBERON:0004139,1.81e-12,24;UBERON:0004291,1.81e-12,24;UBERON:0003914,5.81e-12,117;UBERON:0003513,2.42e-11,7;UBERON:0004797,2.98e-11,7;UBERON:0007100,4.04e-11,27;UBERON:0002049,4.48e-11,78;UBERON:0007798,4.48e-11,78;UBERON:0002456,2.49e-10,2;UBERON:0000947,2.38e-08,21;UBERON:0010191,2.38e-08,21;UBERON:0003081,3.40e-08,203;UBERON:0001134,2.08e-07,62;UBERON:0002036,2.08e-07,62;UBERON:0003082,2.08e-07,62;UBERON:0002385,3.54e-07,64;UBERON:0001015,3.54e-07,64;UBERON:0000383,3.54e-07,64;UBERON:0000025,5.52e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916008719652036,0,0,0,0,1.2663051166458,0.132409180813219,2.29469296599051,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.936480230490962,0.570471821544449,0,0.587172493218824,0,0.561803226808994,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0.519254429183621,0.232420756919918,0,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88887408098384,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.808729926293264,3.17020642346017,7.16139375606268,0,1.70599442741899,0,0,0.282810863907425,0,0,3.3171948762061,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.563391205064483,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0.686520205190771,0,1.08806040407946,5.17493024963719,0.477890301491107,0,0.310525913752519,0,0,0,0,0,0,1.09109195521536,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr11:102668148..102668159,+ | |||
}} |
Revision as of 10:03, 11 January 2014
Short description: | p@chr11:102668148..102668159, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102668148..102668159, + |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.34e-25 | 3 |
cardiac mesenchymal cell | 5.64e-19 | 4 |
migratory trunk neural crest cell | 5.64e-19 | 4 |
fibroblast of tunica adventitia of artery | 6.18e-19 | 4 |
fibroblast of the aortic adventitia | 6.18e-19 | 4 |
cardiocyte | 1.66e-18 | 16 |
smooth muscle cell of the subclavian artery | 1.75e-15 | 5 |
vascular associated smooth muscle cell | 2.63e-14 | 32 |
smooth muscle cell | 1.14e-10 | 43 |
smooth muscle myoblast | 1.14e-10 | 43 |
smooth muscle cell of the internal thoracic artery | 2.49e-10 | 2 |
bone matrix secreting cell | 2.72e-10 | 2 |
osteocyte | 2.72e-10 | 2 |
osteoclast | 2.72e-10 | 2 |
muscle cell | 2.37e-08 | 55 |
muscle precursor cell | 6.41e-08 | 58 |
myoblast | 6.41e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.41e-08 | 58 |
electrically responsive cell | 1.57e-07 | 61 |
electrically active cell | 1.57e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.25e-19 | 1 |
skin benign neoplasm | 3.25e-19 | 1 |
integumentary system benign neoplasm | 3.25e-19 | 1 |
dermis tumor | 3.25e-19 | 1 |
cutaneous fibrous histiocytoma | 3.25e-19 | 1 |
giant cell tumor | 2.72e-10 | 2 |
bone giant cell tumor | 2.72e-10 | 2 |