FFCP PHASE1:Hg19::chr12:94167610..94167614,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:94167610..94167614,+ | |||
|id=chr12:94167610..94167614,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.19e-42!42;CL:0000860!2.23e-38!45;CL:0002194!7.88e-27!63;CL:0000576!7.88e-27!63;CL:0000040!7.88e-27!63;CL:0000559!7.88e-27!63;CL:0002009!1.50e-25!65;CL:0000766!8.51e-24!76;CL:0000839!1.10e-22!70;CL:0000557!3.65e-22!71;CL:0002087!3.52e-21!119;CL:0000738!6.10e-18!140;CL:0002031!1.12e-16!124;CL:0000763!9.96e-15!112;CL:0000049!9.96e-15!112;CL:0000988!2.89e-14!182;CL:0000037!6.83e-14!172;CL:0000566!6.83e-14!172;CL:0002032!4.86e-13!165;CL:0000837!4.86e-13!165;CL:0002393!2.26e-11!9;CL:0002397!2.26e-11!9;CL:0000080!3.61e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.25e-34;33!CL:0002057;3.25e-34;33!CL:0000473;2.97e-27;39!CL:0000234;2.97e-27;39!CL:0000576;1.49e-18;48!CL:0000766;1.37e-13;69!CL:0002087;1.13e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.82e-38,42;CL:0002057,2.82e-38,42;CL:0000473,3.30e-33,48;CL:0000234,3.30e-33,48;CL:0002194,4.19e-26,59;CL:0000576,4.19e-26,59;CL:0000040,4.19e-26,59;CL:0000559,4.19e-26,59;CL:0002009,3.46e-25,61;CL:0000766,2.74e-24,72;CL:0000839,3.92e-23,66;CL:0000557,9.29e-23,67;CL:0000763,8.55e-18,108;CL:0000049,8.55e-18,108;CL:0002087,1.76e-16,115;CL:0002031,1.10e-15,120;CL:0000738,1.79e-15,136;CL:0000988,1.50e-14,177;CL:0002032,1.96e-14,161;CL:0000837,1.96e-14,161;CL:0000037,1.04e-13,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-27;42!UBERON:0005425;6.32e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-19!102;UBERON:0003061!1.53e-19!102;UBERON:0002371!4.09e-19!80;UBERON:0002193!3.86e-17!112;UBERON:0001474!8.51e-17!86;UBERON:0004765!7.77e-15!101;UBERON:0001434!7.77e-15!101;UBERON:0002405!1.61e-12!115;UBERON:0002204!6.54e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.32e-10;1!UBERON:0001785;6.32e-10;1!UBERON:0002464;6.32e-10;1!UBERON:0004904;6.32e-10;1!UBERON:0001021;6.32e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.00e-20,76;UBERON:0001474,3.22e-18,82;UBERON:0002390,3.12e-17,98;UBERON:0003061,3.12e-17,98;UBERON:0004765,2.08e-16,90;UBERON:0002405,8.28e-16,93;UBERON:0002193,2.04e-15,108;UBERON:0001434,1.51e-14,100;UBERON:0000941,4.85e-10,1;UBERON:0001785,4.85e-10,1;UBERON:0002464,4.85e-10,1;UBERON:0004904,4.85e-10,1;UBERON:0001021,4.85e-10,1;UBERON:0003902,4.85e-10,1;UBERON:0005425,4.85e-10,1;UBERON:0002204,4.38e-09,167;UBERON:0003081,5.02e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,1.23852898652861,0,0,0,0.0774672005803016,0,0,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,1.62700325833979,1.23350366406548,1.85823822537062,1.1507695692886,0.512321413058201,0.47296445977717,3.44745680736619,2.5819387343353,2.70852973188684,0.564727018627814,0.272906150057846,0.224723484445085,3.67300670845083,0.962787081228281,3.19668562899521,0,0,0.426224750532694,1.45104619314292,1.13477044938228,2.4912889959823,0.502497330513487,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0.845021145247767,0.212604299965044,0.419317291016752,0.336985893439485,0.600707571366025,0.64290234678832,1.71007646244749,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,1.17842362989935,0.221533894583621,0.541607727530031,0.128091319725675,0,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0,1.24930726552346,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.491337269247072,0,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0.413509717453592,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,3.1668811219199,0.398495976502139,0.276283915531148,0.503865495708552,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,1.18608451472249,0.494255755786011,0.417687798021821,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0.189932387867636,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,3.3657933507229,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0.776503360757966,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.504143392443436,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.60511520611056,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.351742488719241,0,0,0.336283722218824,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.245148321753905,0,0,0.297046400327086,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0.286679166302903,0,0,1.30905207102113,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.517164979309476,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:94167610..94167614,+ | |||
}} |
Revision as of 15:14, 11 January 2014
Short description: | p@chr12:94167610..94167614, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:94167610..94167614, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.82e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.82e-38 | 42 |
defensive cell | 3.30e-33 | 48 |
phagocyte | 3.30e-33 | 48 |
monopoietic cell | 4.19e-26 | 59 |
monocyte | 4.19e-26 | 59 |
monoblast | 4.19e-26 | 59 |
promonocyte | 4.19e-26 | 59 |
macrophage dendritic cell progenitor | 3.46e-25 | 61 |
myeloid leukocyte | 2.74e-24 | 72 |
myeloid lineage restricted progenitor cell | 3.92e-23 | 66 |
granulocyte monocyte progenitor cell | 9.29e-23 | 67 |
myeloid cell | 8.55e-18 | 108 |
common myeloid progenitor | 8.55e-18 | 108 |
nongranular leukocyte | 1.76e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-15 | 120 |
leukocyte | 1.79e-15 | 136 |
hematopoietic cell | 1.50e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.96e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-14 | 161 |
hematopoietic stem cell | 1.04e-13 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.00e-20 | 76 |
bone element | 3.22e-18 | 82 |
hematopoietic system | 3.12e-17 | 98 |
blood island | 3.12e-17 | 98 |
skeletal element | 2.08e-16 | 90 |
immune system | 8.28e-16 | 93 |
hemolymphoid system | 2.04e-15 | 108 |
skeletal system | 1.51e-14 | 100 |
cranial nerve II | 4.85e-10 | 1 |
cranial nerve | 4.85e-10 | 1 |
nerve trunk | 4.85e-10 | 1 |
nerve connecting eye with brain | 4.85e-10 | 1 |
nerve | 4.85e-10 | 1 |
retinal neural layer | 4.85e-10 | 1 |
presumptive neural retina | 4.85e-10 | 1 |
musculoskeletal system | 4.38e-09 | 167 |
lateral plate mesoderm | 5.02e-07 | 203 |