FFCP PHASE1:Hg19::chr13:36700192..36700196,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=78bp_to_AB384469_5end | |||
|description=CAGE_peak_1_at_AB384469_5end | |||
|id=chr13:36700192..36700196,- | |||
|ontology_enrichment_celltype=CL:0000128!7.58e-11!7;CL:0000126!7.58e-11!7;CL:0000127!7.58e-11!7;CL:0002453!7.58e-11!7;CL:0000188!5.56e-10!9;CL:0002319!5.33e-09!25;CL:0002603!1.91e-07!3;CL:0002605!5.28e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;2.45e-12;2!DOID:4236;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.65e-12,2;DOID:4236,1.65e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.57e-35!82;UBERON:0001049!2.01e-34!57;UBERON:0005068!2.01e-34!57;UBERON:0006241!2.01e-34!57;UBERON:0007135!2.01e-34!57;UBERON:0002020!1.19e-32!34;UBERON:0003528!1.19e-32!34;UBERON:0005743!1.33e-32!86;UBERON:0001869!2.68e-32!32;UBERON:0002616!1.61e-30!59;UBERON:0000955!4.89e-30!69;UBERON:0006238!4.89e-30!69;UBERON:0001893!4.90e-30!34;UBERON:0000956!6.75e-30!25;UBERON:0000203!6.75e-30!25;UBERON:0003075!7.80e-29!86;UBERON:0007284!7.80e-29!86;UBERON:0002791!1.62e-28!33;UBERON:0000073!1.96e-28!94;UBERON:0001016!1.96e-28!94;UBERON:0002346!4.68e-27!90;UBERON:0002780!4.47e-26!41;UBERON:0001890!4.47e-26!41;UBERON:0006240!4.47e-26!41;UBERON:0003080!2.69e-25!42;UBERON:0002619!9.22e-25!22;UBERON:0000033!3.77e-24!123;UBERON:0001950!3.96e-24!20;UBERON:0003056!4.67e-23!61;UBERON:0000153!1.87e-22!129;UBERON:0007811!1.87e-22!129;UBERON:0004121!1.59e-21!169;UBERON:0000924!1.04e-20!173;UBERON:0006601!1.04e-20!173;UBERON:0007023!1.82e-15!115;UBERON:0001871!9.24e-14!7;UBERON:0000200!5.05e-13!6;UBERON:0003076!3.85e-10!15;UBERON:0003057!3.85e-10!15;UBERON:0000064!3.48e-09!219;UBERON:0000488!3.62e-08!4;UBERON:0000477!5.88e-08!286;UBERON:0002771!8.01e-08!3;UBERON:0004733!1.06e-07!12;UBERON:0002028!1.06e-07!12;UBERON:0007277!1.06e-07!12;UBERON:0000349!2.04e-07!5;UBERON:0000475!2.06e-07!365;UBERON:0000483!2.61e-07!309;UBERON:0000922!2.87e-07!612;UBERON:0001872!3.11e-07!5;UBERON:0000025!3.19e-07!194;UBERON:0000119!4.03e-07!312;UBERON:0004732!5.02e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.22e-26;20!UBERON:0002619;4.06e-24;22!UBERON:0000956;2.26e-21;25!UBERON:0000203;2.26e-21;25!UBERON:0002021;1.48e-18;5!UBERON:0002791;3.71e-16;32!UBERON:0001869;5.20e-16;32!UBERON:0001871;1.12e-13;6!UBERON:0001893;1.29e-13;34!UBERON:0003528;8.90e-13;34!UBERON:0002020;8.90e-13;34!UBERON:0002771;1.48e-12;2!UBERON:0002780;7.47e-10;41!UBERON:0001890;7.47e-10;41!UBERON:0002114;1.17e-08;2!UBERON:0000955;1.75e-08;68!UBERON:0000922;1.88e-08;49!UBERON:0001017;2.44e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.74e-26,20;UBERON:0002619,4.93e-24,22;UBERON:0000956,2.68e-21,25;UBERON:0000203,2.68e-21,25;UBERON:0002021,2.11e-18,5;UBERON:0002791,7.67e-17,32;UBERON:0001869,7.67e-17,32;UBERON:0003528,6.80e-16,34;UBERON:0002020,6.80e-16,34;UBERON:0001893,6.80e-16,34;UBERON:0001871,1.15e-13,6;UBERON:0002780,2.77e-13,41;UBERON:0001890,2.77e-13,41;UBERON:0003080,2.77e-13,41;UBERON:0006240,2.77e-13,41;UBERON:0002771,1.48e-12,2;UBERON:0000955,2.40e-11,68;UBERON:0006238,2.40e-11,68;UBERON:0000073,2.26e-10,53;UBERON:0002616,2.26e-10,53;UBERON:0001049,7.80e-10,56;UBERON:0005068,7.80e-10,56;UBERON:0006241,7.80e-10,56;UBERON:0007135,7.80e-10,56;UBERON:0001017,1.45e-09,81;UBERON:0003056,4.72e-09,61;UBERON:0002114,1.04e-08,2;UBERON:0001016,1.27e-08,89;UBERON:0003075,8.73e-07,82;UBERON:0007284,8.73e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.19647276823534,0.3755727921195,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0,0,0.434763085832475,0,0,0.554805861502613,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,1.96565909307848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,1.23069818544453,1.51243017733031,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.126831620387814,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.203974470572744,1.74540276136151,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0,0,0,0,0.404234377916439,0.435433495793923,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@AB384469 | |||
}} |
Revision as of 17:20, 11 January 2014
Short description: | p1@AB384469 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AB384469_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_AB384469_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 2.74e-26 | 20 |
regional part of cerebral cortex | 4.93e-24 | 22 |
cerebral cortex | 2.68e-21 | 25 |
pallium | 2.68e-21 | 25 |
occipital lobe | 2.11e-18 | 5 |
regional part of telencephalon | 7.67e-17 | 32 |
cerebral hemisphere | 7.67e-17 | 32 |
brain grey matter | 6.80e-16 | 34 |
gray matter | 6.80e-16 | 34 |
telencephalon | 6.80e-16 | 34 |
temporal lobe | 1.15e-13 | 6 |
regional part of forebrain | 2.77e-13 | 41 |
forebrain | 2.77e-13 | 41 |
anterior neural tube | 2.77e-13 | 41 |
future forebrain | 2.77e-13 | 41 |
middle temporal gyrus | 1.48e-12 | 2 |
brain | 2.40e-11 | 68 |
future brain | 2.40e-11 | 68 |
regional part of nervous system | 2.26e-10 | 53 |
regional part of brain | 2.26e-10 | 53 |
neural tube | 7.80e-10 | 56 |
neural rod | 7.80e-10 | 56 |
future spinal cord | 7.80e-10 | 56 |
neural keel | 7.80e-10 | 56 |
central nervous system | 1.45e-09 | 81 |
pre-chordal neural plate | 4.72e-09 | 61 |
duodenum | 1.04e-08 | 2 |
nervous system | 1.27e-08 | 89 |
neural plate | 8.73e-07 | 82 |
presumptive neural plate | 8.73e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.65e-12 | 2 |
carcinosarcoma | 1.65e-12 | 2 |