FFCP PHASE1:Hg19::chr15:29097282..29097283,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:29097282..29097283,+ | |||
|id=chr15:29097282..29097283,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.84e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.07e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.12e-15;1 | |||
|ontology_enrichment_disease=DOID:8692!3.53e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:154;7.03e-08;2!DOID:4236;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,5.74e-08,2;DOID:4236,5.74e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002616!1.06e-31!59;UBERON:0001049!1.35e-31!57;UBERON:0005068!1.35e-31!57;UBERON:0006241!1.35e-31!57;UBERON:0007135!1.35e-31!57;UBERON:0000955!1.26e-29!69;UBERON:0006238!1.26e-29!69;UBERON:0001017!4.34e-28!82;UBERON:0002780!2.97e-27!41;UBERON:0001890!2.97e-27!41;UBERON:0006240!2.97e-27!41;UBERON:0002346!4.08e-27!90;UBERON:0000073!7.47e-27!94;UBERON:0001016!7.47e-27!94;UBERON:0003075!1.79e-26!86;UBERON:0007284!1.79e-26!86;UBERON:0003080!2.28e-26!42;UBERON:0005743!4.35e-26!86;UBERON:0002020!3.28e-23!34;UBERON:0003528!3.28e-23!34;UBERON:0007023!4.14e-23!115;UBERON:0001893!5.24e-23!34;UBERON:0002791!7.16e-22!33;UBERON:0001869!1.37e-20!32;UBERON:0003056!8.74e-19!61;UBERON:0002619!7.64e-18!22;UBERON:0001950!1.50e-15!20;UBERON:0000956!4.13e-15!25;UBERON:0000203!4.13e-15!25;UBERON:0000153!3.62e-14!129;UBERON:0007811!3.62e-14!129;UBERON:0000033!5.29e-14!123;UBERON:0000924!1.16e-13!173;UBERON:0006601!1.16e-13!173;UBERON:0004121!5.12e-13!169;UBERON:0000025!1.22e-12!194;UBERON:0002308!6.18e-10!9;UBERON:0000125!6.18e-10!9;UBERON:0004111!6.33e-10!241;UBERON:0000200!9.40e-10!6;UBERON:0000119!2.76e-09!312;UBERON:0000483!3.68e-09!309;UBERON:0000477!4.31e-09!286;UBERON:0002298!4.84e-09!8;UBERON:0004733!7.57e-09!12;UBERON:0002028!7.57e-09!12;UBERON:0007277!7.57e-09!12;UBERON:0004732!5.32e-08!13;UBERON:0009663!2.30e-07!7;UBERON:0002420!2.59e-07!9;UBERON:0007245!2.59e-07!9;UBERON:0010009!2.59e-07!9;UBERON:0010011!2.59e-07!9;UBERON:0000454!2.59e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;1.84e-14;1!UBERON:0002038;1.84e-14;1!UBERON:0009661;1.84e-14;1!UBERON:0002950;1.84e-14;1!UBERON:0001891;1.84e-14;1!UBERON:0009663;1.92e-08;7!UBERON:0001905;7.03e-08;2!UBERON:0002702;7.03e-08;2!UBERON:0002757;7.03e-08;2!UBERON:0010134;7.03e-08;2!UBERON:0005408;7.03e-08;2!UBERON:0001899;7.03e-08;2!UBERON:0000955;5.94e-07;68!UBERON:0002420;9.37e-07;9!UBERON:0000125;9.37e-07;9!UBERON:0007245;9.37e-07;9!UBERON:0002308;9.37e-07;9!UBERON:0010009;9.37e-07;9!UBERON:0010011;9.37e-07;9!UBERON:0000454;9.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.61e-14,1;UBERON:0009661,1.61e-14,1;UBERON:0002950,1.61e-14,1;UBERON:0001891,1.61e-14,1;UBERON:0009616,1.61e-14,1;UBERON:0010286,1.61e-14,1;UBERON:0001874,1.84e-14,1;UBERON:0000955,9.83e-09,68;UBERON:0006238,9.83e-09,68;UBERON:0000073,1.71e-08,53;UBERON:0002616,1.71e-08,53;UBERON:0009663,1.85e-08,7;UBERON:0001049,4.98e-08,56;UBERON:0005068,4.98e-08,56;UBERON:0006241,4.98e-08,56;UBERON:0007135,4.98e-08,56;UBERON:0001905,7.52e-08,2;UBERON:0002757,7.52e-08,2;UBERON:0010134,7.52e-08,2;UBERON:0005408,7.52e-08,2;UBERON:0001899,7.52e-08,2;UBERON:0002780,8.13e-08,41;UBERON:0001890,8.13e-08,41;UBERON:0003080,8.13e-08,41;UBERON:0006240,8.13e-08,41;UBERON:0002702,8.60e-08,2;UBERON:0001017,2.84e-07,81;UBERON:0002420,9.10e-07,9;UBERON:0000125,9.10e-07,9;UBERON:0007245,9.10e-07,9;UBERON:0002308,9.10e-07,9;UBERON:0010009,9.10e-07,9;UBERON:0010011,9.10e-07,9;UBERON:0000454,9.10e-07,9 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0.805658634218294,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,0.831076008928724,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0.684704037099577,0,2.50634477090067,0,0.321176150207399,0.403599414382095,0.851692475380653,0,2.15068535015921,0.447352215784832,0.834245708559542,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,1.38899995946634,0,0.482385754501632,0,0.663475559587348,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0.760531603454056,0,0,0,0,0,0.498635045700469,0,0,0.503464760927528,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0.19871461170299,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.247247575143499,0.202210631562555,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.546746009922222,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0.517131825446202,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.001527445652,1.14681839138014,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.244736704506468,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.383683113910955,0.215649622793364,0,0.109209638192014,0.169732529954025,0,0.247871528518004,0,0,0,1.60114149657094,0,0,0.192687675289379,2.8339315265117,0.798169295285756,0.205116364240755,0,0.691572524642179,0.807378228159255,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.570742291745161,0.546974809018219,0,0,0,0,1.07140367175657,0.672567444437648,0,0.455324382702595,0,0,0,0.271878931907327,0.72350050919134,0.236387681767936,0,0.078493092850514,1.09980912941201,0,0,0,0,0,0.632054446930906,2.09234565662625,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0.401206833445841,0,0,1.14671666521161,0,0.339957450954573,0.436350690340377,0,0,0,0,0,0.655593431782173,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0.193766729508018,0.124149428591716,0.112131862580613,0.0636471582781649,1.0105859447911,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr15:29097282..29097283,+ | |||
}} |
Revision as of 22:33, 11 January 2014
Short description: | p@chr15:29097282..29097283, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:29097282..29097283, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.07e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.61e-14 | 1 |
midbrain nucleus | 1.61e-14 | 1 |
regional part of midbrain | 1.61e-14 | 1 |
midbrain | 1.61e-14 | 1 |
presumptive midbrain | 1.61e-14 | 1 |
midbrain neural tube | 1.61e-14 | 1 |
putamen | 1.84e-14 | 1 |
brain | 9.83e-09 | 68 |
future brain | 9.83e-09 | 68 |
regional part of nervous system | 1.71e-08 | 53 |
regional part of brain | 1.71e-08 | 53 |
telencephalic nucleus | 1.85e-08 | 7 |
neural tube | 4.98e-08 | 56 |
neural rod | 4.98e-08 | 56 |
future spinal cord | 4.98e-08 | 56 |
neural keel | 4.98e-08 | 56 |
pineal body | 7.52e-08 | 2 |
regional part of epithalamus | 7.52e-08 | 2 |
secretory circumventricular organ | 7.52e-08 | 2 |
circumventricular organ | 7.52e-08 | 2 |
epithalamus | 7.52e-08 | 2 |
regional part of forebrain | 8.13e-08 | 41 |
forebrain | 8.13e-08 | 41 |
anterior neural tube | 8.13e-08 | 41 |
future forebrain | 8.13e-08 | 41 |
middle frontal gyrus | 8.60e-08 | 2 |
central nervous system | 2.84e-07 | 81 |
basal ganglion | 9.10e-07 | 9 |
neural nucleus | 9.10e-07 | 9 |
nuclear complex of neuraxis | 9.10e-07 | 9 |
nucleus of brain | 9.10e-07 | 9 |
aggregate regional part of brain | 9.10e-07 | 9 |
collection of basal ganglia | 9.10e-07 | 9 |
cerebral subcortex | 9.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 5.74e-08 | 2 |
carcinosarcoma | 5.74e-08 | 2 |