FFCP PHASE1:Hg19::chr15:40213106..40213121,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32370 | |||
|TSSclassifier=strong | |||
|UniProt=Q14439 | |||
|association_with_transcript=-13bp_to_ENST00000561100,NM_007223,uc001zkj.1,uc001zkk.1_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_GPR176_5end | |||
|id=chr15:40213106..40213121,- | |||
|ontology_enrichment_celltype=CL:0000055!2.63e-22!180;CL:0000057!1.10e-13!75;CL:0002321!1.29e-07!248;CL:0002620!1.39e-07!23;CL:0000220!4.71e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.75e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.53e-11,76;CL:0002620,5.82e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.41e-16!365;UBERON:0000119!2.74e-15!312;UBERON:0000483!3.73e-15!309;UBERON:0000064!9.93e-12!219;UBERON:0000924!3.41e-11!173;UBERON:0006601!3.41e-11!173;UBERON:0004121!7.62e-11!169;UBERON:0000481!8.70e-11!347;UBERON:0005743!7.38e-10!86;UBERON:0000073!8.65e-10!94;UBERON:0001016!8.65e-10!94;UBERON:0000468!1.24e-09!659;UBERON:0000033!1.55e-09!123;UBERON:0000477!1.92e-09!286;UBERON:0001017!4.85e-09!82;UBERON:0000153!2.00e-08!129;UBERON:0007811!2.00e-08!129;UBERON:0002346!3.22e-08!90;UBERON:0003075!6.53e-08!86;UBERON:0007284!6.53e-08!86;UBERON:0001869!8.51e-08!32;UBERON:0002020!2.11e-07!34;UBERON:0003528!2.11e-07!34;UBERON:0000914!2.18e-07!83;UBERON:0002329!2.18e-07!83;UBERON:0003077!2.18e-07!83;UBERON:0003059!2.18e-07!83;UBERON:0007282!2.18e-07!83;UBERON:0009618!2.18e-07!83;UBERON:0007285!2.18e-07!83;UBERON:0000955!2.23e-07!69;UBERON:0006238!2.23e-07!69;UBERON:0001049!2.91e-07!57;UBERON:0005068!2.91e-07!57;UBERON:0006241!2.91e-07!57;UBERON:0007135!2.91e-07!57;UBERON:0004111!3.25e-07!241;UBERON:0005256!3.49e-07!143;UBERON:0000025!3.49e-07!194;UBERON:0002097!4.09e-07!40;UBERON:0002616!4.84e-07!59;UBERON:0001893!5.00e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.51e-08;32!UBERON:0003528;8.02e-08;34!UBERON:0002020;8.02e-08;34!UBERON:0002791;1.62e-07;32!UBERON:0001893;1.73e-07;34!UBERON:0000956;2.34e-07;25!UBERON:0000203;2.34e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.16e-10,171;UBERON:0000924,3.16e-10,171;UBERON:0006601,3.16e-10,171;UBERON:0001016,6.51e-10,89;UBERON:0001017,6.62e-10,81;UBERON:0010314,7.77e-10,132;UBERON:0001869,3.04e-09,32;UBERON:0000483,3.29e-09,306;UBERON:0000119,4.38e-09,309;UBERON:0003528,4.47e-09,34;UBERON:0002020,4.47e-09,34;UBERON:0000073,7.64e-09,53;UBERON:0002616,7.64e-09,53;UBERON:0002346,9.41e-09,86;UBERON:0003075,1.09e-08,82;UBERON:0007284,1.09e-08,82;UBERON:0001049,1.51e-08,56;UBERON:0005068,1.51e-08,56;UBERON:0006241,1.51e-08,56;UBERON:0007135,1.51e-08,56;UBERON:0001893,2.88e-08,34;UBERON:0000955,3.37e-08,68;UBERON:0006238,3.37e-08,68;UBERON:0002791,4.55e-08,32;UBERON:0010371,5.07e-08,104;UBERON:0000956,2.95e-07,25;UBERON:0000203,2.95e-07,25;UBERON:0002097,5.97e-07,41;UBERON:0003056,6.21e-07,61 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.845726424575827,0,0.893922188854576,0,0,0,1.04474251279935,0.491467873003018,2.79120467188971,1.09220686065086,1.31883489114227,1.48519623552056,1.32558950291166,0.672325146451775,0,0,0.975865597581014,0.738726348460727,1.02000345622126,0,2.28988789704845,2.87436292653057,2.38531015230125,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,2.68280343881454,1.79007586580942,0,1.00267582127178,0.579386075843295,0.795285947051099,0.973269740605272,0.756278537312543,0.886917589850256,1.05401742831751,0.458426764241994,1.82147644146271,1.48313777113772,0,0.348259474598534,0,0,0,0,1.59009925893364,0,0.347140501607594,0.56530794192401,0.419499436209906,1.92582629358047,0.835979866147242,0,0,0,2.01414658554573,0.760272105718513,0.732186172644509,0,0.81014194788176,0.982297011124877,0.44905874525234,0.337834441449967,1.53316637465883,1.89853131913626,0.366403487860815,0,0,0,1.98788780678127,2.02608818663328,1.45650098894541,2.29469296599051,0.709336764396714,0.560677600142307,0,3.20667812942308,0.311211035399766,1.21239604862719,1.47115712802113,0.908144565869588,0,1.17160715916898,1.24864030732128,2.2818872861778,1.19558944441441,1.52664848236894,1.29498355494505,0.702254033511242,1.22492502752936,0.982674538494144,0.723280468230358,3.56400857184616,1.7308685049499,0.910161361938026,1.43723628363248,0.673344455816265,0.875829639103749,1.6623846929051,0.438977620880838,2.75839016219118,0.751190294532984,1.13432183160021,1.97328599257748,4.91181994282705,2.11931901159562,1.50045548042201,1.64884046781502,1.54584324027377,1.30281799432113,0.337552664482532,1.07180705677318,1.51460264546469,2.94559675655358,0.969876340912871,2.13005755509969,0.806016785821122,2.03472710772585,0.966304265816484,0.818238361772504,0.860413786167011,10.7336861394044,9.14455401418248,8.24976994373581,5.39037486079926,8.57890892977137,14.5990943630332,4.69348596989448,5.78916844373597,1.38134921352481,0.464367928031979,0,0.473227200159376,1.68584690078102,0.723033089650446,0.882351781859152,0.435758888184812,1.18635309555548,1.07865046528132,0.784885860501384,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0.441463099414651,0.491953754172454,0.514703430895577,0.439001141634502,2.24803506515239,1.00528972411631,1.29623823221941,0.651616610620649,0,2.88662684050547,0.695582429850461,0.469634776943287,0.866198686566443,1.85194205030644,0.951270761172991,1.58040879591855,0,0,0,0.148631162288728,0,0.503946384596579,0.283550194484773,1.25381931783988,0.290633938513962,0,0,0.880484340132261,0,0.144119953416961,0.25248486685276,0.190493682876507,1.14596527667483,1.17217447210047,0,0.205654985406647,0.300343057843917,0,1.00917975910825,0.43596006883328,0.66004457238855,1.16344544182,0,1.690605505112,1.32969058292435,1.04007436911366,0.514414748524284,2.83698264046557,1.3321108950805,0.714889968290738,1.08524321078289,0.823240336780769,0.977208552881205,0.710783897485092,0,0.904318131178758,0.871533458600294,0.99972991182057,0,0,0,1.91699884393266,0,1.42636905040718,0.868687840005475,0.821905290201534,0.895304816199478,0,0,0.215627574859517,0.128343036279748,0.508189248444927,1.30139853857622,0,1.17261385734044,1.27587750330633,0,0,0,1.47229790062968,0.500170521059677,0.813795071099207,1.24782516918484,0.892144943985809,1.57702415033935,2.10854546986884,0,2.27407504055985,2.0694614258501,1.99267679560631,1.29058417979192,2.43274120510632,2.34961388955289,1.02943027143257,0,0,0.213455115606889,0.303127571446259,0,0,1.24053903909388,1.07423381301644,1.96462066103151,1.02511319404561,2.04682899626681,1.44768529029247,1.48418066444991,0.771048469013278,0.710246901252508,1.14978018419333,0.519254429183621,1.04589340613963,0.604297247958111,0.802025881213139,0.276242966807689,0.574072240823034,0.728364672026868,1.70461739447251,0,1.5403067420883,2.35304930753057,1.46139224653261,1.05551628892876,2.27466768141793,0.850468526382578,0.863663664408557,1.54227252690289,2.16757150035082,3.01013864312912,1.27438136522519,0.831076008928724,1.11937377361089,0,0.522870902049801,2.56450125116389,1.31205858279882,2.27764876265012,0.412164046590889,2.56394501491362,2.22775649785588,1.14853107599234,0,3.21367859688319,1.64340221096607,1.07834031980251,1.22802939780904,1.24052915236078,1.6113036730241,2.46528379654188,0.93749290157711,0.623224249527161,0.495854746082934,0.576570202095319,0.510450849978337,0.30347334256665,0.929691098594572,0.62962469366128,0,1.23213432070436,0.532306030317022,2.60979897622522,1.29726953372744,1.28812398067792,1.48863347743867,1.2655176988749,0.190630193923825,1.2794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| |||
|short_description=p5@GPR176 | |||
}} |
Revision as of 22:59, 11 January 2014
Short description: | p5@GPR176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPR176_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -13bp_to_ENST00000561100, NM_007223, uc001zkj.1, uc001zkk.1_5end |
EntrezGene: | GPR176 |
HGNC: | 32370 |
UniProt: | Q14439 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.53e-11 | 76 |
skin fibroblast | 5.82e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.16e-10 | 171 |
ectoderm | 3.16e-10 | 171 |
presumptive ectoderm | 3.16e-10 | 171 |
nervous system | 6.51e-10 | 89 |
central nervous system | 6.62e-10 | 81 |
structure with developmental contribution from neural crest | 7.77e-10 | 132 |
cerebral hemisphere | 3.04e-09 | 32 |
epithelium | 3.29e-09 | 306 |
cell layer | 4.38e-09 | 309 |
brain grey matter | 4.47e-09 | 34 |
gray matter | 4.47e-09 | 34 |
regional part of nervous system | 7.64e-09 | 53 |
regional part of brain | 7.64e-09 | 53 |
neurectoderm | 9.41e-09 | 86 |
neural plate | 1.09e-08 | 82 |
presumptive neural plate | 1.09e-08 | 82 |
neural tube | 1.51e-08 | 56 |
neural rod | 1.51e-08 | 56 |
future spinal cord | 1.51e-08 | 56 |
neural keel | 1.51e-08 | 56 |
telencephalon | 2.88e-08 | 34 |
brain | 3.37e-08 | 68 |
future brain | 3.37e-08 | 68 |
regional part of telencephalon | 4.55e-08 | 32 |
ecto-epithelium | 5.07e-08 | 104 |
cerebral cortex | 2.95e-07 | 25 |
pallium | 2.95e-07 | 25 |
skin of body | 5.97e-07 | 41 |
pre-chordal neural plate | 6.21e-07 | 61 |