FFCP PHASE1:Hg19::chr16:30662008..30662043,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=78994 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28458 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-179bp_to_ENST00000287463_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_PRR14_5end | |||
|id=chr16:30662008..30662043,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.83e-33!140;CL:0000037!1.53e-27!172;CL:0000566!1.53e-27!172;CL:0000988!3.10e-26!182;CL:0002031!1.47e-25!124;CL:0002032!1.61e-25!165;CL:0000837!1.61e-25!165;CL:0002087!2.33e-25!119;CL:0002057!2.63e-18!42;CL:0000860!3.08e-18!45;CL:0000766!1.36e-16!76;CL:0000763!2.45e-13!112;CL:0000049!2.45e-13!112;CL:0000839!5.46e-13!70;CL:0000557!2.38e-12!71;CL:0000838!2.39e-12!52;CL:0000542!2.47e-12!53;CL:0000051!2.47e-12!53;CL:0002009!3.77e-12!65;CL:0002194!9.01e-12!63;CL:0000576!9.01e-12!63;CL:0000040!9.01e-12!63;CL:0000559!9.01e-12!63;CL:0000791!9.18e-10!18;CL:0000789!9.18e-10!18;CL:0002420!9.18e-10!18;CL:0002419!9.18e-10!18;CL:0000790!9.18e-10!18;CL:0000084!5.92e-09!25;CL:0000827!5.92e-09!25;CL:0000625!2.60e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.35e-17;33!CL:0002057;6.35e-17;33!CL:0000791;1.84e-14;18!CL:0000789;1.84e-14;18!CL:0002419;1.84e-14;18!CL:0000576;2.80e-14;48!CL:0002087;5.09e-12;104!CL:0000766;1.01e-11;69!CL:0000473;1.69e-11;39!CL:0000234;1.69e-11;39!CL:0000084;2.30e-11;25!CL:0000625;8.53e-11;11!CL:0000094;1.26e-09;8!CL:0000542;1.35e-08;53!CL:0000738;2.11e-08;136!CL:0000081;1.24e-07;11!CL:0000236;2.45e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.41e-40,136;CL:0002031,2.25e-31,120;CL:0002087,2.75e-31,115;CL:0000037,1.32e-29,168;CL:0002032,7.21e-29,161;CL:0000837,7.21e-29,161;CL:0000988,5.35e-28,177;CL:0000860,2.68e-26,42;CL:0002057,2.68e-26,42;CL:0000766,1.42e-22,72;CL:0000473,3.05e-21,48;CL:0000234,3.05e-21,48;CL:0000839,6.41e-17,66;CL:0000557,9.22e-16,67;CL:0002194,4.11e-15,59;CL:0000576,4.11e-15,59;CL:0000040,4.11e-15,59;CL:0000559,4.11e-15,59;CL:0002009,4.52e-15,61;CL:0000763,5.35e-15,108;CL:0000049,5.35e-15,108;CL:0000791,6.77e-15,18;CL:0000789,6.77e-15,18;CL:0002420,6.77e-15,18;CL:0002419,6.77e-15,18;CL:0000790,6.77e-15,18;CL:0000838,2.83e-14,52;CL:0000542,8.69e-14,53;CL:0000051,8.69e-14,53;CL:0000084,8.75e-12,25;CL:0000827,8.75e-12,25;CL:0000625,4.94e-11,11;CL:0002393,1.05e-09,9;CL:0002397,1.05e-09,9;CL:0000094,1.64e-09,8;CL:0000081,1.18e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-18;42!CL:0000790;1.84e-14;18!CL:0000051;1.35e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.05e-21!112;UBERON:0002390!2.09e-19!102;UBERON:0003061!2.09e-19!102;UBERON:0007023!1.17e-11!115;UBERON:0002371!3.52e-11!80;UBERON:0002405!6.06e-10!115;UBERON:0001474!4.13e-09!86;UBERON:0003081!9.19e-09!216;UBERON:0000178!1.28e-08!15;UBERON:0000179!1.28e-08!15;UBERON:0000463!1.28e-08!15;UBERON:0004765!9.40e-07!101;UBERON:0001434!9.40e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.96e-12;15!UBERON:0000179;2.96e-12;15!UBERON:0000463;2.96e-12;15!UBERON:0002193;1.14e-07;42!UBERON:0002390;1.24e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.01e-27,108;UBERON:0002390,5.67e-25,98;UBERON:0003061,5.67e-25,98;UBERON:0002405,4.95e-18,93;UBERON:0002371,5.48e-13,76;UBERON:0000178,2.62e-12,15;UBERON:0000179,2.62e-12,15;UBERON:0000463,2.62e-12,15;UBERON:0003081,1.11e-11,203;UBERON:0001474,4.45e-11,82;UBERON:0004765,5.45e-09,90;UBERON:0007023,3.47e-08,114;UBERON:0001434,2.12e-07,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.491467873003018,0,0.655324116390517,1.58260186937072,0.123766352960047,0,0,1.20538905604795,0,0,0.61560529038394,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.382067028739756,0.492603536699674,0.472264687882075,3.14691421479123,2.68680578668049,2.16742572642506,0,0.30120591877825,0,0.309868802321207,0.142169232487422,0.587200878669695,2.76997704265939,2.60707781711184,2.82114131930607,0.671746422719773,0.647787332037959,0.515151135268373,2.90796477559129,1.13362783106643,5.57943340731977,2.09186133215116,1.23350366406548,3.09706370895104,2.58923153089935,2.30544635876191,2.12834006899727,2.41321976515633,1.93645405075148,2.70852973188684,2.82363509313907,0.818718450173537,2.24723484445085,2.14258724659632,1.28371610830437,5.11469700639233,2.96866170168044,0.598390972864896,3.40979800426155,1.16083695451434,0.56738522469114,1.24564449799115,2.51248665256743,1.5644487552606,1.08594422352558,3.63239701580021,1.10483290796269,2.53169909952708,5.49263744411049,3.82687739937078,2.51590374610051,2.92054440980887,4.20495299956218,2.4108838004562,4.84521664360123,6.76316702476906,5.11459630540975,5.27988733383968,2.18455444504853,3.55803701545422,3.41384178053206,6.80673177961221,4.59801951963587,4.62731410949403,0.954053754535364,3.41527781465669,2.93618594685469,2.29363936875137,0,1.68152568894461,0.790152254325231,2.360517241366,4.32311839024081,3.49522548299166,3.34372990781356,1.95553359980154,2.8406868344084,1.94826728407911,3.45372416344038,5.30290633454707,2.87994062958707,1.89562704635511,3.5865569523189,4.55207716459574,3.4531959966772,1.93445012450094,1.44901542867526,2.22429844743091,1.87278579662799,3.1360657141493,3.28597093822942,3.83220493601921,4.12352934579156,6.07247260846807,4.14135038621326,1.95325036156926,4.75226022224187,5.72185452495537,4.99147783502232,1.24930726552346,3.78843603270427,4.10563998460523,2.82249440514625,3.20928234940209,4.63438092424957,0,0,0,0.722878304769133,0.50133791063589,1.01392563272577,0,0.486634870302636,0.283604451492204,0.221729397462564,0.263504357079378,1.76821751921912,0,0,0,0.522389211897802,0.132957960518865,0.715471872916026,0.571994910780128,0.74291500265913,0.79504962946682,0.860234595106124,2.42998351125316,1.13061588384802,0.838998872419812,1.6507082516404,1.46296476575767,0.258416759169329,0,1.00416183829401,0.805658634218294,0,4.39311703586705,0,0.81014194788176,0.535798369704479,0.898117490504679,0.563057402416611,3.06633274931766,1.89853131913626,1.28241220751285,38.2163210564583,50.4114343392823,1.3082821564276,0,0.506522046658319,0.264818361626438,0.286836620748814,0,0.560677600142307,2.1349799145941,0,0,0.134710672069688,0,0,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0.368502951935304,0.309977343527296,0,0.247266929278557,1.82032272387605,0.718618141816238,0.168336113954066,0.375355559615893,0.277064115484183,0,0.30648779579902,0.45071417671979,0.453728732640084,0.89694817844431,0.427114777637135,0.635795703478686,0.300091096084402,0.309157587715317,0.257640540045629,0,0.675105328965065,0.194874010322397,0.504867548488229,0.184099797284599,0,0,0.302256294682921,0,0.57978255948989,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,0,0.591534000199219,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,3.80265104465493,0.982827216677626,1.18157981336281,0.882926198829301,0,0.171567810298526,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779121492523,0,1.29929802984966,1.85194205030644,1.14152491340759,0,2.57545848628462,0.738651018262192,0,0.594524649154913,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.704387472105808,3.7319060797339,2.73827911492227,3.7872730027914,0.126995788584338,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.2933531432838,0.129271715757778,3.57656445851882,0,0,0,0,0,0.799266537048298,0,0.542621605391443,0.823240336780769,0,0,0,0,0.871533458600294,0.499864955910285,0,0.502257091432126,0,0,0,1.42636905040718,0.144781306667579,0.821905290201534,0,0.224170287987055,2.95546140302891,3.45004119775228,3.85029108839245,0.76228387266739,0,0.773288812777695,0.670065061337395,0,62.9165900115633,32.9077605124427,55.5316788004288,0.24538298343828,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,1.02943027143257,4.75566460082641,5.1771408196468,3.09509917629989,0,1.66435439510497,0.30239029332968,0.248107807818777,0.460385919864187,0.841980283299221,0.640695746278505,0,0.160853921143607,0,0.771048469013278,0.177561725313127,0.246381468041427,1.03850885836724,0.348631135379878,0,0,0.276242966807689,0,0,0,0,0.07701533710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| |||
|short_description=p6@PRR14 | |||
}} |
Revision as of 03:12, 12 January 2014
Short description: | p6@PRR14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRR14_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -179bp_to_ENST00000287463_5end |
EntrezGene: | PRR14 |
HGNC: | 28458 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.01e-27 | 108 |
hematopoietic system | 5.67e-25 | 98 |
blood island | 5.67e-25 | 98 |
immune system | 4.95e-18 | 93 |
bone marrow | 5.48e-13 | 76 |
blood | 2.62e-12 | 15 |
haemolymphatic fluid | 2.62e-12 | 15 |
organism substance | 2.62e-12 | 15 |
lateral plate mesoderm | 1.11e-11 | 203 |
bone element | 4.45e-11 | 82 |
skeletal element | 5.45e-09 | 90 |
adult organism | 3.47e-08 | 114 |
skeletal system | 2.12e-07 | 100 |