FFCP PHASE1:Hg19::chr17:28088355..28088367,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30580 | |||
|TSSclassifier=strong | |||
|UniProt=Q76I76 | |||
|association_with_transcript=40bp_to_uc002heq.2_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_4_at_SSH2_5end | |||
|id=chr17:28088355..28088367,- | |||
|ontology_enrichment_celltype=CL:0002087!7.55e-39!119;CL:0000738!6.72e-38!140;CL:0000037!6.87e-32!172;CL:0000566!6.87e-32!172;CL:0002031!1.15e-30!124;CL:0000988!1.76e-29!182;CL:0002032!4.74e-29!165;CL:0000837!4.74e-29!165;CL:0000542!5.36e-22!53;CL:0000051!5.36e-22!53;CL:0000838!9.25e-22!52;CL:0002057!2.35e-16!42;CL:0000766!3.07e-16!76;CL:0000860!1.84e-15!45;CL:0002194!3.93e-15!63;CL:0000576!3.93e-15!63;CL:0000040!3.93e-15!63;CL:0000559!3.93e-15!63;CL:0002009!1.70e-14!65;CL:0000557!3.05e-12!71;CL:0000945!1.00e-11!24;CL:0000826!1.00e-11!24;CL:0000839!3.40e-11!70;CL:0000791!1.31e-10!18;CL:0000789!1.31e-10!18;CL:0002420!1.31e-10!18;CL:0002419!1.31e-10!18;CL:0000790!1.31e-10!18;CL:0000763!2.60e-10!112;CL:0000049!2.60e-10!112;CL:0000084!1.01e-09!25;CL:0000827!1.01e-09!25;CL:0000236!7.51e-09!14;CL:0000625!3.43e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002087;7.79e-18;104!CL:0000542;7.17e-17;53!CL:0000945;2.63e-16;24!CL:0000791;1.61e-15;18!CL:0000789;1.61e-15;18!CL:0002419;1.61e-15;18!CL:0000576;3.87e-15;48!CL:0000860;1.56e-14;33!CL:0002057;1.56e-14;33!CL:0000236;1.19e-12;13!CL:0000473;4.77e-12;39!CL:0000234;4.77e-12;39!CL:0000084;8.30e-12;25!CL:0000766;1.35e-11;69!CL:0000738;4.86e-11;136!CL:0000625;3.14e-10;11!CL:0000094;9.63e-09;8!CL:0000988;7.82e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.76e-55,136;CL:0002087,1.25e-54,115;CL:0000037,1.81e-46,168;CL:0002031,7.66e-45,120;CL:0000988,6.23e-43,177;CL:0002032,8.52e-43,161;CL:0000837,8.52e-43,161;CL:0000542,7.98e-31,53;CL:0000051,7.98e-31,53;CL:0000838,1.95e-30,52;CL:0000766,8.88e-24,72;CL:0000860,9.53e-24,42;CL:0002057,9.53e-24,42;CL:0000473,9.19e-23,48;CL:0000234,9.19e-23,48;CL:0002194,2.17e-20,59;CL:0000576,2.17e-20,59;CL:0000040,2.17e-20,59;CL:0000559,2.17e-20,59;CL:0002009,3.19e-19,61;CL:0000557,3.08e-17,67;CL:0000945,3.59e-17,24;CL:0000826,3.59e-17,24;CL:0000839,1.23e-16,66;CL:0000791,5.44e-16,18;CL:0000789,5.44e-16,18;CL:0002420,5.44e-16,18;CL:0002419,5.44e-16,18;CL:0000790,5.44e-16,18;CL:0000763,3.35e-15,108;CL:0000049,3.35e-15,108;CL:0000236,3.45e-13,14;CL:0000084,4.38e-12,25;CL:0000827,4.38e-12,25;CL:0000625,1.51e-10,11;CL:0002320,1.20e-09,361;CL:0000134,2.14e-09,354;CL:0002393,4.27e-09,9;CL:0002397,4.27e-09,9;CL:0000094,6.28e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-17;42!CL:0000051;7.17e-17;53!CL:0000790;1.61e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-17!102;UBERON:0003061!1.05e-17!102;UBERON:0002193!1.36e-17!112;UBERON:0002371!3.53e-09!80;UBERON:0000178!7.53e-09!15;UBERON:0000179!7.53e-09!15;UBERON:0000463!7.53e-09!15;UBERON:0001474!1.03e-08!86;UBERON:0002405!2.84e-07!115;UBERON:0003081!8.62e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.11e-11;15!UBERON:0000179;2.11e-11;15!UBERON:0000463;2.11e-11;15!UBERON:0002390;5.55e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.62e-28,98;UBERON:0003061,5.62e-28,98;UBERON:0002193,4.26e-27,108;UBERON:0002405,1.78e-18,93;UBERON:0002371,4.58e-15,76;UBERON:0001474,7.02e-13,82;UBERON:0004765,2.27e-12,90;UBERON:0000178,3.13e-11,15;UBERON:0000179,3.13e-11,15;UBERON:0000463,3.13e-11,15;UBERON:0003081,1.28e-10,203;UBERON:0001434,1.09e-09,100;UBERON:0002384,2.57e-09,371 | |||
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| |||
|short_description=p4@SSH2 | |||
}} |
Revision as of 14:31, 20 January 2014
Short description: | p4@SSH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SSH2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 40bp_to_uc002heq.2_5end |
EntrezGene: | SSH2 |
HGNC: | 30580 |
UniProt: | Q76I76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.62e-28 | 98 |
blood island | 5.62e-28 | 98 |
hemolymphoid system | 4.26e-27 | 108 |
immune system | 1.78e-18 | 93 |
bone marrow | 4.58e-15 | 76 |
bone element | 7.02e-13 | 82 |
skeletal element | 2.27e-12 | 90 |
blood | 3.13e-11 | 15 |
haemolymphatic fluid | 3.13e-11 | 15 |
organism substance | 3.13e-11 | 15 |
lateral plate mesoderm | 1.28e-10 | 203 |
skeletal system | 1.09e-09 | 100 |
connective tissue | 2.57e-09 | 371 |