FFCP PHASE1:Hg19::chr17:36981556..36981603,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25989 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NXE8,B4DJK2 | |||
|association_with_transcript=0bp_to_ENST00000225428,ENST00000536127,NM_017748,uc002hqu.2,uc010wdv.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_CWC25_5end | |||
|id=chr17:36981556..36981603,- | |||
|ontology_enrichment_celltype=CL:0000037!1.19e-43!172;CL:0000566!1.19e-43!172;CL:0000738!2.98e-42!140;CL:0002032!2.03e-40!165;CL:0000837!2.03e-40!165;CL:0000988!4.98e-39!182;CL:0002031!7.05e-34!124;CL:0002087!3.45e-31!119;CL:0000763!5.46e-27!112;CL:0000049!5.46e-27!112;CL:0000766!9.38e-25!76;CL:0002057!5.04e-24!42;CL:0000860!2.87e-23!45;CL:0000557!1.50e-21!71;CL:0000839!9.47e-21!70;CL:0002009!7.45e-19!65;CL:0002194!1.02e-17!63;CL:0000576!1.02e-17!63;CL:0000040!1.02e-17!63;CL:0000559!1.02e-17!63;CL:0000542!6.15e-12!53;CL:0000051!6.15e-12!53;CL:0000838!9.41e-12!52;CL:0000134!1.34e-08!358;CL:0000791!2.76e-08!18;CL:0000789!2.76e-08!18;CL:0002420!2.76e-08!18;CL:0002419!2.76e-08!18;CL:0000790!2.76e-08!18;CL:0002320!2.90e-07!365;CL:0000084!5.48e-07!25;CL:0000827!5.48e-07!25;CL:0000094!7.05e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.39e-19;33!CL:0002057;7.39e-19;33!CL:0000576;3.76e-15;48!CL:0000473;1.56e-13;39!CL:0000234;1.56e-13;39!CL:0000766;1.84e-12;69!CL:0002087;3.98e-11;104!CL:0000738;5.47e-09;136!CL:0000791;2.69e-08;18!CL:0000789;2.69e-08;18!CL:0002419;2.69e-08;18!CL:0000763;3.14e-08;100!CL:0000988;1.74e-07;177!CL:0000542;2.94e-07;53!CL:0000084;5.37e-07;25!CL:0000094;6.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.60e-44,168;CL:0000738,5.82e-43,136;CL:0002032,6.29e-41,161;CL:0000837,6.29e-41,161;CL:0000988,2.96e-40,177;CL:0002031,1.57e-34,120;CL:0002087,8.15e-32,115;CL:0000763,1.46e-27,108;CL:0000049,1.46e-27,108;CL:0000766,1.22e-25,72;CL:0000860,5.04e-24,42;CL:0002057,5.04e-24,42;CL:0000557,2.27e-22,67;CL:0000839,1.52e-21,66;CL:0000473,4.91e-21,48;CL:0000234,4.91e-21,48;CL:0002009,1.24e-19,61;CL:0002194,1.81e-18,59;CL:0000576,1.81e-18,59;CL:0000040,1.81e-18,59;CL:0000559,1.81e-18,59;CL:0000542,6.15e-12,53;CL:0000051,6.15e-12,53;CL:0000838,9.41e-12,52;CL:0000134,1.08e-08,354;CL:0000791,2.76e-08,18;CL:0000789,2.76e-08,18;CL:0002420,2.76e-08,18;CL:0002419,2.76e-08,18;CL:0000790,2.76e-08,18;CL:0002320,2.41e-07,361;CL:0000084,5.48e-07,25;CL:0000827,5.48e-07,25;CL:0000094,7.05e-07,8;CL:0000219,8.68e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-17;42!CL:0000790;2.69e-08;18!CL:0000049;9.93e-08;108!CL:0000051;2.94e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-25!102;UBERON:0003061!2.56e-25!102;UBERON:0002193!1.92e-21!112;UBERON:0002371!6.73e-18!80;UBERON:0001474!1.38e-16!86;UBERON:0002405!2.33e-13!115;UBERON:0004765!5.37e-13!101;UBERON:0001434!5.37e-13!101;UBERON:0007023!1.98e-08!115;UBERON:0002384!2.29e-07!375;UBERON:0000178!5.54e-07!15;UBERON:0000179!5.54e-07!15;UBERON:0000463!5.54e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.03e-07;15!UBERON:0000179;5.03e-07;15!UBERON:0000463;5.03e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.33e-26,98;UBERON:0003061,6.33e-26,98;UBERON:0002193,7.24e-22,108;UBERON:0002371,1.90e-18,76;UBERON:0001474,4.91e-17,82;UBERON:0002405,2.08e-16,93;UBERON:0004765,2.67e-14,90;UBERON:0001434,3.61e-12,100;UBERON:0007023,2.91e-08,114;UBERON:0002384,1.92e-07,371;UBERON:0000178,5.54e-07,15;UBERON:0000179,5.54e-07,15;UBERON:0000463,5.54e-07,15 | |||
|phase1_expression=12.3541297903979,11.1332272423311,12.4039875604455,12.0087958023756,7.15137751083661,7.85104671690332,10.1319951267324,13.8978372153903,9.14149698699435,9.09215565055583,4.18680700783456,13.1064823278103,7.64924236862515,10.8914390604841,7.29074226601415,10.0848771967766,12.0538905604795,8.03341099426111,6.34312638427659,12.5583479238324,5.91602004608334,5.32873026512749,13.4530913951597,11.4974517061223,10.796667005153,21.7778206381661,22.3313603303852,24.9513176764363,102.668076257564,91.7352261452338,67.0353813958609,8.27479102031034,7.8313538882345,10.3531122846701,24.8669713862768,26.5856464751478,27.8920417368105,89.7472561821642,85.6324790697505,70.9625547240835,19.7045617331133,21.3769819572526,24.9848300605161,38.6759315153642,34.0088349319929,41.9670425854922,59.2694044109496,59.2081758751429,75.8780608693004,72.2107904728598,56.3553554364021,81.5863693115619,89.2891313107842,85.8494629166489,93.4442757500958,54.2137937882702,42.8462655590818,66.2934279113,77.4392247698383,78.6276116336429,61.376364076708,42.8806690242731,43.2836137038941,51.573194814456,73.4229373730318,69.2209974123191,107.125426827239,63.8171609752128,53.7127405972807,88.6130486396876,52.0643572264697,99.0666840806549,108.863061279664,27.2519319342405,27.0007460955605,31.0294795352396,37.9670773275153,42.6502375669878,52.5572668499452,26.7911979116774,24.0689179410899,28.1302796797536,28.1593991138116,26.2146533405823,16.9006758234075,27.3107342442565,30.4300950147369,22.9900975981793,33.713288512028,21.9432363543134,39.8449078376614,50.5023982859007,55.047344850033,42.2948251452883,59.4139076760428,18.9636541038055,67.6681609191586,47.5543022926489,41.7371042969004,25.7467202901644,38.4588274627637,28.8803161498187,21.4309401248702,25.5129946267047,33.8796793596063,23.9256606150311,38.1833447908672,18.9575153193999,21.7199110424997,20.5547380754595,18.7918012094377,22.025034515864,27.1364410586571,26.2190011527919,14.6349733326968,25.2679834215573,34.4898444241729,31.613724984402,37.6999341109059,32.1751068467338,26.6944216081132,27.5631092890028,29.0609979820101,28.6690008985897,34.9806034346568,38.8314693352188,25.4549679045524,54.232213927453,47.0694744578973,39.9715354716525,14.6284119788377,6.70700859703636,10.356867509326,13.373248638229,15.0401373190767,12.0222610737484,29.4255800408907,16.5455855902896,13.3294092201336,5.5432349365641,9.74966121193699,26.2613046372914,4.00724817121796,8.52804218404188,15.5782748954248,14.8010276704377,10.7695948020281,36.0120842701066,34.8916895575878,33.0597176183313,19.0811911072037,10.3228151412735,14.9270415691266,9.04492707078415,7.1314904155684,11.0047216776027,8.56879362800923,16.538672586837,16.7210143462754,16.0665894127042,10.876391561947,5.32190474002959,12.4471649349566,16.5448386155641,9.72170337458112,12.5912616880552,18.1868791827198,19.2565631626481,7.66583187329416,7.59412527654503,9.16008719652036,321.544218543994,337.368829809043,7.41359888642308,8.94549513051573,11.9032680964705,26.3494269818305,19.5048902109193,12.4133933769425,8.97084160227691,5.33744978648525,9.12669929143492,14.626918663789,11.9892498142022,8.99040467124023,12.5626664945293,7.49028701823999,11.2474287280222,6.55536161343673,17.1141546463335,9.26581819421167,11.7434498643765,11.0073602170329,11.9383185696911,12.8617127890583,10.6865856061238,16.3254734257709,17.8200428592308,11.8688126053707,8.19145225744224,2.87447256726495,17.5069558512229,14.6388668250198,16.9009110445352,12.7303510055443,11.0335606487647,11.568330535808,8.73427810332162,25.8321075391961,14.5219024396626,17.3784158950841,26.4080164554274,19.2708229675881,24.7334918443804,13.7726473685376,33.2489374515295,16.4668538722426,22.7190396819703,17.21333104611,16.3262517387,22.7206139210633,16.9263525022436,15.4300139002544,13.7215205745941,16.6375133560409,20.3631262726193,9.51394907810844,11.9276791489337,9.06312754382243,7.87824018116815,5.80337957013945,6.20461510428911,3.12899064659632,6.43240938192885,4.14404764057442,13.9310378409594,6.49691533502627,13.8418956046617,12.1380976856233,13.2556066435915,13.2352767278873,11.7654899809899,12.1008015746659,11.9999864262546,13.7355025587742,10.7729203944989,13.2867981832437,2.80483547606892,11.5240723172792,1.47008711385542,25.3510069643662,23.587853200263,20.6776467338491,22.0731549707325,15.9884970106048,10.6372042385086,12.7310331074006,6.74410519545717,11.2592449101027,15.2770934511574,17.5936484867575,4.15973914111831,12.9898207822746,11.4771100925326,8.92306076192245,12.2711480596913,12.0376233269919,15.7910946354717,5.53143078571493,3.43394464837949,20.436011505254,17.5503198854428,11.1473371716546,17.8094284574876,19.3179447428688,17.1547867663288,14.2398051097529,16.2755005567819,9.20118429996507,96.5619946276049,19.9869945210023,40.014326299369,41.3624266306679,41.6600030307054,13.7790430614007,10.6956759156318,8.20522130470329,6.84289784090821,8.22619941626588,10.5120070245371,9.71809870943966,15.4740896396598,14.3866822714982,13.200891447771,11.246639270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| |||
|short_description=p1@CWC25 | |||
}} |
Revision as of 14:56, 20 January 2014
Short description: | p1@CWC25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CWC25_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000225428, ENST00000536127, NM_017748, uc002hqu.2, uc010wdv.1_5end |
EntrezGene: | CWC25 |
HGNC: | 25989 |
UniProt: | Q9NXE8B4DJK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.33e-26 | 98 |
blood island | 6.33e-26 | 98 |
hemolymphoid system | 7.24e-22 | 108 |
bone marrow | 1.90e-18 | 76 |
bone element | 4.91e-17 | 82 |
immune system | 2.08e-16 | 93 |
skeletal element | 2.67e-14 | 90 |
skeletal system | 3.61e-12 | 100 |
adult organism | 2.91e-08 | 114 |
connective tissue | 1.92e-07 | 371 |
blood | 5.54e-07 | 15 |
haemolymphatic fluid | 5.54e-07 | 15 |
organism substance | 5.54e-07 | 15 |