FFCP PHASE1:Hg19::chr2:242447962..242447981,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11404 | |||
|TSSclassifier=strong | |||
|UniProt=A8K6Z3 | |||
|association_with_transcript=0bp_to_ENST00000405883_5end | |||
|coexpression_cluster_id=C2973 | |||
|description=CAGE_peak_3_at_STK25_5end | |||
|id=chr2:242447962..242447981,- | |||
|ontology_enrichment_celltype=CL:0002321!1.21e-30!248;CL:0000220!1.17e-29!246;CL:0000222!7.05e-18!119;CL:0000066!4.12e-17!254;CL:0000055!1.26e-12!180;CL:0002078!1.74e-11!44;CL:0000115!1.68e-10!35;CL:0000213!2.26e-09!57;CL:0000215!2.26e-09!57;CL:0000183!4.64e-09!59;CL:1000449!9.63e-09!16;CL:0002139!1.06e-08!24;CL:0000393!2.56e-08!60;CL:0000211!2.56e-08!60;CL:0000221!4.10e-08!71;CL:0002681!1.53e-07!13;CL:0002584!1.53e-07!13;CL:0000071!2.72e-07!18;CL:0002546!2.72e-07!18;CL:0000680!3.69e-07!57;CL:0000056!3.69e-07!57;CL:0000355!3.69e-07!57;CL:0000187!6.20e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.80e-09;36!CL:1000449;4.59e-09;15!CL:0002139;7.97e-09;24!CL:0002078;4.00e-08;45!CL:0002681;5.52e-08;12!CL:0002584;5.52e-08;12!CL:0000071;2.71e-07;18!CL:1000497;7.77e-07;17!CL:0002518;7.77e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.67e-31,250;CL:0000222,3.37e-18,121;CL:0000066,7.38e-17,253;CL:0002078,7.31e-12,45;CL:0000115,7.07e-11,36;CL:0000213,1.04e-09,58;CL:0000215,1.04e-09,58;CL:1000449,3.83e-09,15;CL:0002139,1.01e-08,24;CL:0000393,2.81e-08,61;CL:0000211,2.81e-08,61;CL:0000221,4.06e-08,72;CL:0002681,5.85e-08,12;CL:0002584,5.85e-08,12;CL:0000071,2.61e-07,18;CL:0002546,2.61e-07,18;CL:0000680,3.99e-07,58;CL:0000056,3.99e-07,58;CL:0000355,3.99e-07,58;CL:0000187,6.74e-07,55;CL:1000497,7.53e-07,17;CL:0002518,7.53e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.71e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!8.70e-27!309;UBERON:0000119!1.26e-26!312;UBERON:0000475!2.84e-20!365;UBERON:0000025!7.07e-17!194;UBERON:0000481!2.50e-16!347;UBERON:0004111!3.12e-15!241;UBERON:0000477!1.01e-14!286;UBERON:0003914!1.12e-14!118;UBERON:0002049!8.88e-14!79;UBERON:0007798!8.88e-14!79;UBERON:0000490!4.63e-13!138;UBERON:0005256!4.76e-13!143;UBERON:0000064!8.33e-12!219;UBERON:0002100!3.73e-11!216;UBERON:0000468!1.35e-10!659;UBERON:0000055!1.42e-10!69;UBERON:0000486!7.92e-10!82;UBERON:0004121!9.31e-10!169;UBERON:0001981!1.01e-09!60;UBERON:0007500!1.01e-09!60;UBERON:0004537!1.01e-09!60;UBERON:0006965!1.01e-09!60;UBERON:0000924!1.34e-09!173;UBERON:0006601!1.34e-09!173;UBERON:0000914!3.63e-09!83;UBERON:0002329!3.63e-09!83;UBERON:0003077!3.63e-09!83;UBERON:0003059!3.63e-09!83;UBERON:0007282!3.63e-09!83;UBERON:0009618!3.63e-09!83;UBERON:0007285!3.63e-09!83;UBERON:0004872!4.77e-09!84;UBERON:0003104!5.01e-09!238;UBERON:0009142!5.01e-09!238;UBERON:0001134!7.75e-09!61;UBERON:0002036!7.75e-09!61;UBERON:0003082!7.75e-09!61;UBERON:0000922!8.95e-09!612;UBERON:0004211!9.63e-09!16;UBERON:0001285!9.63e-09!16;UBERON:0007684!9.63e-09!16;UBERON:0003220!9.63e-09!16;UBERON:0004208!9.63e-09!16;UBERON:0000353!1.71e-08!17;UBERON:0006555!1.74e-08!17;UBERON:0005103!1.74e-08!17;UBERON:0000083!1.74e-08!17;UBERON:0009201!1.74e-08!17;UBERON:0004819!1.74e-08!17;UBERON:0006553!1.74e-08!17;UBERON:0003074!1.74e-08!17;UBERON:0003060!1.74e-08!17;UBERON:0004290!2.83e-08!70;UBERON:0000033!4.19e-08!123;UBERON:0002385!5.93e-08!63;UBERON:0001015!5.93e-08!63;UBERON:0000383!5.93e-08!63;UBERON:0000467!9.74e-08!625;UBERON:0001225!1.53e-07!13;UBERON:0008987!1.53e-07!13;UBERON:0000153!1.67e-07!129;UBERON:0007811!1.67e-07!129;UBERON:0000480!1.77e-07!626;UBERON:0002050!2.12e-07!605;UBERON:0005423!2.12e-07!605;UBERON:0001986!2.72e-07!18;UBERON:0004638!2.72e-07!18;UBERON:0004852!2.72e-07!18;UBERON:0000080!2.83e-07!18;UBERON:0002120!2.83e-07!18;UBERON:0004875!2.83e-07!18;UBERON:0005721!2.83e-07!18;UBERON:0005754!2.83e-07!18;UBERON:0007297!2.83e-07!18;UBERON:0000923!3.16e-07!604;UBERON:0005291!3.16e-07!604;UBERON:0006598!3.16e-07!604;UBERON:0002532!3.16e-07!604;UBERON:0004876!3.26e-07!20;UBERON:0000073!4.08e-07!94;UBERON:0001016!4.08e-07!94;UBERON:0000487!4.92e-07!22;UBERON:0006914!5.84e-07!25;UBERON:0005743!9.60e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.59e-09;15!UBERON:0004819;4.59e-09;15!UBERON:0001285;4.59e-09;15!UBERON:0007684;4.59e-09;15!UBERON:0000353;1.10e-08;15!UBERON:0001225;5.52e-08;12!UBERON:0008987;5.52e-08;12!UBERON:0003914;1.62e-07;74!UBERON:0004638;2.71e-07;18!UBERON:0001986;2.71e-07;18!UBERON:0004852;2.71e-07;18!UBERON:0000490;5.20e-07;33!UBERON:0000487;6.18e-07;22!UBERON:0002049;6.84e-07;75!UBERON:0007798;6.84e-07;75!UBERON:0006914;8.20e-07;25 | |||
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| |||
|short_description=p3@STK25 | |||
}} |
Revision as of 09:41, 21 January 2014
Short description: | p3@STK25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STK25_5end |
Coexpression cluster: | C2973_Mesenchymal_Alveolar_Renal_Pericytes_Hepatic_Smooth_Astrocyte |
Association with transcript: | 0bp_to_ENST00000405883_5end |
EntrezGene: | STK25 |
HGNC: | 11404 |
UniProt: | A8K6Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.67e-31 | 250 |
mesodermal cell | 3.37e-18 | 121 |
epithelial cell | 7.38e-17 | 253 |
meso-epithelial cell | 7.31e-12 | 45 |
endothelial cell | 7.07e-11 | 36 |
lining cell | 1.04e-09 | 58 |
barrier cell | 1.04e-09 | 58 |
epithelial cell of nephron | 3.83e-09 | 15 |
endothelial cell of vascular tree | 1.01e-08 | 24 |
electrically responsive cell | 2.81e-08 | 61 |
electrically active cell | 2.81e-08 | 61 |
ectodermal cell | 4.06e-08 | 72 |
kidney cortical cell | 5.85e-08 | 12 |
renal cortical epithelial cell | 5.85e-08 | 12 |
blood vessel endothelial cell | 2.61e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.61e-07 | 18 |
muscle precursor cell | 3.99e-07 | 58 |
myoblast | 3.99e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.99e-07 | 58 |
muscle cell | 6.74e-07 | 55 |
kidney cell | 7.53e-07 | 17 |
kidney epithelial cell | 7.53e-07 | 17 |