FFCP PHASE1:Hg19::chr20:62710832..62710879,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10287 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13735 | |||
|TSSclassifier=strong | |||
|UniProt=P49795 | |||
|association_with_transcript=0bp_to_ENST00000395042,NM_005873,uc002yhy.2,uc002yhz.2_5end | |||
|coexpression_cluster_id=C560 | |||
|description=CAGE_peak_1_at_RGS19_5end | |||
|id=chr20:62710832..62710879,- | |||
|ontology_enrichment_celltype=CL:0000037!4.59e-59!172;CL:0000566!4.59e-59!172;CL:0002032!1.06e-56!165;CL:0000837!1.06e-56!165;CL:0000988!4.82e-54!182;CL:0000738!3.99e-51!140;CL:0002031!3.23e-45!124;CL:0002087!3.72e-45!119;CL:0000763!7.25e-38!112;CL:0000049!7.25e-38!112;CL:0000766!1.80e-33!76;CL:0000557!4.11e-29!71;CL:0000839!4.76e-28!70;CL:0002009!2.69e-27!65;CL:0002194!9.42e-27!63;CL:0000576!9.42e-27!63;CL:0000040!9.42e-27!63;CL:0000559!9.42e-27!63;CL:0002057!4.52e-23!42;CL:0000860!2.51e-21!45;CL:0000542!5.15e-16!53;CL:0000051!5.15e-16!53;CL:0000838!1.17e-15!52;CL:0000945!1.01e-09!24;CL:0000826!1.01e-09!24;CL:0000236!5.89e-08!14;CL:0000791!6.12e-08!18;CL:0000789!6.12e-08!18;CL:0002420!6.12e-08!18;CL:0002419!6.12e-08!18;CL:0000790!6.12e-08!18;CL:0002393!2.61e-07!9;CL:0002397!2.61e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.53e-19;48!CL:0000473;1.45e-18;39!CL:0000234;1.45e-18;39!CL:0000860;2.92e-18;33!CL:0002057;2.92e-18;33!CL:0000766;4.51e-17;69!CL:0000763;5.68e-15;100!CL:0002087;1.42e-14;104!CL:0000738;5.81e-13;136!CL:0000945;4.41e-11;24!CL:0000542;5.74e-11;53!CL:0000988;1.25e-10;177!CL:0000791;5.33e-09;18!CL:0000789;5.33e-09;18!CL:0002419;5.33e-09;18!CL:0000236;1.11e-08;13!CL:0000094;1.97e-07;8!CL:0000084;2.99e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.27e-71,168;CL:0002032,1.35e-67,161;CL:0000837,1.35e-67,161;CL:0000988,3.56e-63,177;CL:0000738,7.06e-61,136;CL:0002087,8.98e-55,115;CL:0002031,4.15e-54,120;CL:0000763,7.58e-46,108;CL:0000049,7.58e-46,108;CL:0000766,5.03e-41,72;CL:0000557,8.44e-36,67;CL:0000839,1.63e-34,66;CL:0002009,1.99e-34,61;CL:0002194,7.99e-34,59;CL:0000576,7.99e-34,59;CL:0000040,7.99e-34,59;CL:0000559,7.99e-34,59;CL:0000473,1.71e-30,48;CL:0000234,1.71e-30,48;CL:0000860,1.27e-26,42;CL:0002057,1.27e-26,42;CL:0000542,2.91e-18,53;CL:0000051,2.91e-18,53;CL:0000838,7.60e-18,52;CL:0000945,4.59e-11,24;CL:0000826,4.59e-11,24;CL:0000236,5.19e-09,14;CL:0000791,5.43e-09,18;CL:0000789,5.43e-09,18;CL:0002420,5.43e-09,18;CL:0002419,5.43e-09,18;CL:0000790,5.43e-09,18;CL:0002393,2.93e-08,9;CL:0002397,2.93e-08,9;CL:0000094,2.06e-07,8;CL:0000084,3.12e-07,25;CL:0000827,3.12e-07,25;CL:0000134,4.07e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-19;42!CL:0000049;3.35e-13;108!CL:0000051;5.74e-11;53!CL:0000790;5.33e-09;18 | |||
|ontology_enrichment_disease=DOID:1240!1.40e-07!39;DOID:8692!1.48e-07!31;DOID:2531!4.40e-07!51;DOID:0060083!4.40e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.54e-08;31!DOID:1240;1.72e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.58e-09,39;DOID:8692,4.32e-09,31;DOID:2531,5.16e-09,51;DOID:0060083,5.16e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-34!102;UBERON:0003061!1.84e-34!102;UBERON:0002193!5.15e-33!112;UBERON:0002371!2.57e-26!80;UBERON:0001474!2.33e-22!86;UBERON:0002405!7.53e-21!115;UBERON:0004765!1.93e-17!101;UBERON:0001434!1.93e-17!101;UBERON:0007023!7.29e-15!115;UBERON:0003081!3.41e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.47e-41,98;UBERON:0003061,2.47e-41,98;UBERON:0002193,2.43e-39,108;UBERON:0002405,3.13e-33,93;UBERON:0002371,2.96e-32,76;UBERON:0001474,2.53e-27,82;UBERON:0004765,1.49e-23,90;UBERON:0001434,1.34e-18,100;UBERON:0007023,1.52e-16,114;UBERON:0003081,2.05e-14,203 | |||
|phase1_expression=0,0,0.422863212287913,1.0007329835313,0,0,0,0,0,1.22866968250754,0,1.31064823278103,0.263766978228454,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,0,0.612002073732759,0.626909442956176,0.286235987131057,0.273748850145768,0.125542639594803,8.40547463227464,4.8439347775468,5.58846547327123,70.4122055559538,22.6459344877355,70.7509683554467,0.919421224478927,1.8072355126695,0.369754010166788,16.5779809241845,15.4964463411289,19.0840285567651,69.8034214750166,53.5453674745278,55.9888046446898,36.9460532495875,30.4460046057841,40.6969396862015,159.065673224844,113.362783106643,142.882012039624,62.0585528538178,40.2944530261389,31.2803434604055,18.9876978932619,25.359909946381,30.5062076556275,22.7532149286168,23.2374486090177,29.7938270507552,104.286256106603,72.593035915387,60.0011703468376,51.1160100259407,33.0556897888376,38.3602275479425,67.6195165382768,59.041242656003,75.8680055948196,11.3181603065148,7.37600792098482,8.09668923694247,19.597395890026,22.9452484104889,24.3251506069731,11.502590550034,13.2579948955523,15.1901945971625,118.725470907311,106.939962882417,115.731572320623,96.9396086794253,82.8976448485115,65.4153137857116,171.862684475973,145.010257678137,135.536802093358,54.55883578301,56.7984155712617,36.4698794084057,43.0997524792172,43.2427665998893,42.5316805566318,47.5952308405101,50.5648489903743,29.5990743936913,27.6001479004341,25.9945795125156,3.96513985737078,5.60508562981536,20.543958612456,10.0321982758055,10.2182798314783,14.8033079279647,38.954453426028,12.0591238654428,12.3096429491031,11.6896037044747,34.5372416344038,22.9792607830373,18.6088471450242,18.4146627360211,44.3195966250836,35.3761425362869,36.5052148220161,32.3329520809443,30.4293240021805,14.9769428793681,12.0393372640371,21.9524599990451,42.83093153968,29.8911985009499,19.2431369470273,17.4583587493457,27.7151910461964,32.5541726928209,26.6126572445545,25.5977702432214,21.3737640627879,26.2354525759926,35.0430333025145,22.1704559168683,12.7012248231581,8.55808626507223,12.3100743300379,0,1.34140171940727,0.511450247374121,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.702678285545008,4.38779902917337,2.18577172975525,1.11235332835329,46.4102772926197,44.9254722232109,48.5296555893858,23.3720811819235,24.5957811635455,20.0587050717965,2.58391129576717,2.58070378531837,3.81854551768354,3.95715559346807,7.97048928798821,1.6507082516404,1.8809546988313,2.58416759169329,3.91342888955381,2.34304428935269,2.01414658554573,2.28081631715554,4.39311703586705,1.10298924103761,3.24056779152704,1.51809538082936,2.02076435363553,1.91439516821648,1.53316637465883,5.69559395740877,2.19842092716489,151.547480051473,162.867710942297,0.872188104285069,0,1.01304409331664,0.132409180813219,0.573673241497627,1.77334191099179,0.560677600142307,0,0.74000264525148,0.311211035399766,0.67355336034844,0.326923806226917,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.352303495931295,0,0,0.61246251376468,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0.831192346452549,0.438977620880838,0.30648779579902,0.150238058906597,0.453728732640084,0.538168907066586,0,0.635795703478686,0.600182192168805,0.412210116953756,0.515281080091258,0.37223371266318,0,0.487185025805993,0.252433774244115,0,0.646584227275248,0,0.604512589365842,1.3564847384839,3.86521706326594,2.72746120590835,2.58124135850103,0.365921118388786,0.265059536642971,0.464775771478074,0.10366105501537,0.504641701751257,1.09493207722749,0,0,0,0,0,0.236613600079688,0.674338760312407,0.723033089650446,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.588664395376038,0,2.21446636387394,1.40241773803446,0.4115740113314,0,0,0.982827216677626,1.77236972004421,0,0.368965315629341,0.171567810298526,2.19500570817251,0,1.20634766893957,0.648119116109707,0.325808305310325,1.03993478527958,1.44331342025273,0.231860809950154,0.821860859650752,0.866198686566443,1.38895653772983,0.570762456703795,0,1.71697232418975,64.7550726009855,26.2084776955946,48.6023900684141,5.62403003920662,2.35174979478403,0.992425680696705,0.0895585227028483,0.871901815541886,1.15014803749563,0.985326475791887,22.980641277452,16.378921127721,51.5949433232722,19.946304481368,0.063497894292169,0,0,0,0,0,0.285826432630578,0.336393253036082,0,0.07333828582095,0,0,0,0.26593811658487,0,0.514414748524284,2.83698264046557,1.0656887160644,0.142977993658148,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.904318131178758,0.871533458600294,0.99972991182057,37.703371998769,47.2121665946199,48.4918060810973,0.718874566474748,0,0,1.30303176000821,0.410952645100767,0.179060963239896,5.60425719967636,19.1119837395869,8.84073056924021,17.1979668614863,0.508189248444927,1.30139853857622,0.773288812777695,2.01019518401218,0,180.510692771271,260.270469507502,228.342947903256,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.473107245101804,0.234282829985426,0,0,0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| |||
|short_description=p1@RGS19 | |||
}} |
Revision as of 12:54, 21 January 2014
Short description: | p1@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS19_5end |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | 0bp_to_ENST00000395042, NM_005873, uc002yhy.2, uc002yhz.2_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | P49795 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.47e-41 | 98 |
blood island | 2.47e-41 | 98 |
hemolymphoid system | 2.43e-39 | 108 |
immune system | 3.13e-33 | 93 |
bone marrow | 2.96e-32 | 76 |
bone element | 2.53e-27 | 82 |
skeletal element | 1.49e-23 | 90 |
skeletal system | 1.34e-18 | 100 |
adult organism | 1.52e-16 | 114 |
lateral plate mesoderm | 2.05e-14 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.58e-09 | 39 |
myeloid leukemia | 4.32e-09 | 31 |
hematologic cancer | 5.16e-09 | 51 |
immune system cancer | 5.16e-09 | 51 |