FFCP PHASE1:Hg19::chr22:45636741..45636810,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1314 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ICG6 | |||
|association_with_transcript=-91bp_to_ENST00000336156,NM_001009880,uc003bfx.1_5end | |||
|coexpression_cluster_id=C4106 | |||
|description=CAGE_peak_1_at_KIAA0930_5end | |||
|id=chr22:45636741..45636810,- | |||
|ontology_enrichment_celltype=CL:0000766!3.18e-22!76;CL:0002194!3.22e-22!63;CL:0000576!3.22e-22!63;CL:0000040!3.22e-22!63;CL:0000559!3.22e-22!63;CL:0000839!5.33e-22!70;CL:0002009!8.11e-22!65;CL:0000557!9.46e-22!71;CL:0002057!4.77e-18!42;CL:0000763!3.44e-17!112;CL:0000049!3.44e-17!112;CL:0000860!5.31e-15!45;CL:0000738!8.98e-09!140;CL:0000037!1.35e-08!172;CL:0000566!1.35e-08!172;CL:0000988!2.68e-08!182;CL:0002087!2.85e-08!119;CL:0002031!3.10e-08!124;CL:0002032!7.62e-08!165;CL:0000837!7.62e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.98e-14;48!CL:0000473;4.49e-14;39!CL:0000234;4.49e-14;39!CL:0000860;9.81e-13;33!CL:0002057;9.81e-13;33!CL:0000766;1.54e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.78e-26,59;CL:0000576,1.78e-26,59;CL:0000040,1.78e-26,59;CL:0000559,1.78e-26,59;CL:0000766,5.82e-26,72;CL:0002009,6.26e-26,61;CL:0000839,6.28e-26,66;CL:0000557,1.30e-25,67;CL:0000473,5.42e-22,48;CL:0000234,5.42e-22,48;CL:0000763,1.21e-19,108;CL:0000049,1.21e-19,108;CL:0000860,4.77e-18,42;CL:0002057,4.77e-18,42;CL:0000738,3.58e-10,136;CL:0000037,7.76e-10,168;CL:0002087,9.55e-10,115;CL:0002031,1.13e-09,120;CL:0000988,2.78e-09,177;CL:0002032,4.86e-09,161;CL:0000837,4.86e-09,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.50e-19!112;UBERON:0002390!5.44e-18!102;UBERON:0003061!5.44e-18!102;UBERON:0002371!5.84e-18!80;UBERON:0002405!1.49e-17!115;UBERON:0001474!1.04e-15!86;UBERON:0004765!6.63e-14!101;UBERON:0001434!6.63e-14!101;UBERON:0007023!1.32e-09!115;UBERON:0000480!1.48e-09!626;UBERON:0000467!1.59e-09!625;UBERON:0003081!1.79e-09!216;UBERON:0000923!9.59e-08!604;UBERON:0005291!9.59e-08!604;UBERON:0006598!9.59e-08!604;UBERON:0002532!9.59e-08!604;UBERON:0000922!1.12e-07!612;UBERON:0000468!1.13e-07!659;UBERON:0002050!1.60e-07!605;UBERON:0005423!1.60e-07!605;UBERON:0000062!2.16e-07!511;UBERON:0001049!9.36e-07!57;UBERON:0005068!9.36e-07!57;UBERON:0006241!9.36e-07!57;UBERON:0007135!9.36e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.61e-21,108;UBERON:0002371,4.32e-21,76;UBERON:0002390,1.15e-20,98;UBERON:0003061,1.15e-20,98;UBERON:0002405,1.85e-20,93;UBERON:0001474,1.93e-18,82;UBERON:0004765,4.94e-17,90;UBERON:0001434,9.88e-15,100;UBERON:0003081,9.56e-10,203;UBERON:0005423,1.90e-09,581;UBERON:0007023,2.20e-09,114;UBERON:0002050,1.08e-08,564;UBERON:0000922,1.59e-08,592;UBERON:0000923,3.63e-08,560;UBERON:0010316,3.63e-08,560;UBERON:0005291,3.63e-08,560;UBERON:0006598,3.63e-08,560;UBERON:0010317,3.63e-08,560;UBERON:0002532,3.63e-08,560 | |||
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| |||
|short_description=p1@KIAA0930 | |||
}} |
Revision as of 16:32, 21 January 2014
Short description: | p1@KIAA0930 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA0930_5end |
Coexpression cluster: | C4106_Monocytederived_Melanocyte_Macrophage_granulocyte_Dendritic_acute_CD14 |
Association with transcript: | -91bp_to_ENST00000336156, NM_001009880, uc003bfx.1_5end |
EntrezGene: | KIAA0930 |
HGNC: | 1314 |
UniProt: | Q6ICG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.78e-26 | 59 |
monocyte | 1.78e-26 | 59 |
monoblast | 1.78e-26 | 59 |
promonocyte | 1.78e-26 | 59 |
myeloid leukocyte | 5.82e-26 | 72 |
macrophage dendritic cell progenitor | 6.26e-26 | 61 |
myeloid lineage restricted progenitor cell | 6.28e-26 | 66 |
granulocyte monocyte progenitor cell | 1.30e-25 | 67 |
defensive cell | 5.42e-22 | 48 |
phagocyte | 5.42e-22 | 48 |
myeloid cell | 1.21e-19 | 108 |
common myeloid progenitor | 1.21e-19 | 108 |
classical monocyte | 4.77e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.77e-18 | 42 |
leukocyte | 3.58e-10 | 136 |
hematopoietic stem cell | 7.76e-10 | 168 |
nongranular leukocyte | 9.55e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-09 | 120 |
hematopoietic cell | 2.78e-09 | 177 |
hematopoietic oligopotent progenitor cell | 4.86e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.86e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.61e-21 | 108 |
bone marrow | 4.32e-21 | 76 |
hematopoietic system | 1.15e-20 | 98 |
blood island | 1.15e-20 | 98 |
immune system | 1.85e-20 | 93 |
bone element | 1.93e-18 | 82 |
skeletal element | 4.94e-17 | 90 |
skeletal system | 9.88e-15 | 100 |
lateral plate mesoderm | 9.56e-10 | 203 |
developing anatomical structure | 1.90e-09 | 581 |
adult organism | 2.20e-09 | 114 |
embryonic structure | 1.08e-08 | 564 |
embryo | 1.59e-08 | 592 |
germ layer | 3.63e-08 | 560 |
germ layer / neural crest | 3.63e-08 | 560 |
embryonic tissue | 3.63e-08 | 560 |
presumptive structure | 3.63e-08 | 560 |
germ layer / neural crest derived structure | 3.63e-08 | 560 |
epiblast (generic) | 3.63e-08 | 560 |