FFCP PHASE1:Hg19::chr3:107844539..107844555,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_at_chr3:107844539..107844555,- | |||
|id=chr3:107844539..107844555,- | |||
|ontology_enrichment_celltype=CL:0000542!3.83e-63!53;CL:0000051!3.83e-63!53;CL:0000838!1.41e-61!52;CL:0000037!1.12e-54!172;CL:0000566!1.12e-54!172;CL:0000988!3.53e-50!182;CL:0002032!1.87e-46!165;CL:0000837!1.87e-46!165;CL:0000738!4.59e-46!140;CL:0002087!2.72e-45!119;CL:0002031!3.39e-39!124;CL:0000945!5.13e-33!24;CL:0000826!5.13e-33!24;CL:0000084!2.84e-25!25;CL:0000827!2.84e-25!25;CL:0000236!5.40e-24!14;CL:0000791!1.66e-22!18;CL:0000789!1.66e-22!18;CL:0002420!1.66e-22!18;CL:0002419!1.66e-22!18;CL:0000790!1.66e-22!18;CL:0000625!2.60e-15!11;CL:0000134!6.97e-13!358;CL:0002320!3.47e-12!365;CL:0000624!1.66e-10!6;CL:0000219!8.92e-10!390;CL:0000034!8.83e-08!444;CL:0000048!2.15e-07!430;CL:0000723!5.28e-07!436;CL:0000763!8.26e-07!112;CL:0000049!8.26e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.61e-43;53!CL:0000945;3.84e-41;24!CL:0000236;6.20e-39;13!CL:0000791;3.25e-27;18!CL:0000789;3.25e-27;18!CL:0002419;3.25e-27;18!CL:0000084;1.37e-24;25!CL:0000624;2.47e-17;6!CL:0000625;1.99e-14;11!CL:0000784;3.79e-10;3!CL:0000898;5.11e-10;3!CL:0002087;2.86e-09;104!CL:0000738;2.05e-07;136!CL:0000815;3.00e-07;2!CL:0000792;3.00e-07;2!CL:0002677;3.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.83e-70,53;CL:0000051,5.83e-70,53;CL:0000838,1.94e-67,52;CL:0000236,2.78e-41,14;CL:0000945,7.04e-41,24;CL:0000826,7.04e-41,24;CL:0000738,5.31e-37,136;CL:0000037,6.74e-34,168;CL:0002087,2.30e-33,115;CL:0000988,1.61e-31,177;CL:0002031,5.21e-28,120;CL:0000791,1.55e-27,18;CL:0000789,1.55e-27,18;CL:0002420,1.55e-27,18;CL:0002419,1.55e-27,18;CL:0000790,1.55e-27,18;CL:0002032,3.24e-26,161;CL:0000837,3.24e-26,161;CL:0000084,7.43e-25,25;CL:0000827,7.43e-25,25;CL:0000624,2.34e-17,6;CL:0000625,1.06e-14,11;CL:0000784,3.91e-10,3;CL:0000898,4.68e-10,3;CL:0000134,1.78e-09,354;CL:0000817,3.21e-09,3;CL:0002320,4.64e-09,361;CL:0000219,1.32e-07,386;CL:0000815,2.91e-07,2;CL:0000792,2.91e-07,2;CL:0002677,2.91e-07,2;CL:0000785,8.22e-07,2;CL:0000955,8.22e-07,2;CL:0000818,8.22e-07,2;CL:0000954,8.22e-07,2;CL:0000816,8.22e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.61e-43;53!CL:0000790;3.25e-27;18!CL:0000954;7.52e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.07e-13!51;DOID:0060083!1.07e-13!51;DOID:0060058!5.31e-09!10;DOID:1240!1.61e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.06e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.64e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.80e-12!15;UBERON:0000179!4.80e-12!15;UBERON:0000463!4.80e-12!15;UBERON:0002384!3.03e-11!375;UBERON:0002193!5.89e-09!112;UBERON:0002390!1.16e-08!102;UBERON:0003061!1.16e-08!102;UBERON:0004177!2.16e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.71e-08,371;UBERON:0002370,9.37e-07,4;UBERON:0005058,9.37e-07,4;UBERON:0009113,9.37e-07,4;UBERON:0003295,9.37e-07,4;UBERON:0005562,9.37e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.821005894499457,1.33808328233255,1.57345710739562,1.15148819429164,0.309632246632152,0,0,0,4.9579008371393,1.13735385989937,2.64240395401362,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.575384784644301,0.512321413058201,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0.962787081228281,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,1.84138817993782,0,0,0.425208599930087,0,0,0,0,0.285012743741249,0,0.182664153764634,8.79981222306614,14.7457425040775,16.9006758234075,9.38806489646316,14.8146515203325,11.4950487990897,15.2040320740518,22.8972901088487,21.0608798570496,15.8554041130153,11.0859236156316,6.60856642895129,0.560508562981536,2.10707267820062,1.180258620683,2.35806457649499,3.90642848099067,0.668745981562712,5.54067853277104,5.20792586308207,1.94826728407911,0.557052284425868,7.36514768687093,4.2091439970888,3.24964636518019,0.25618263945135,0.260118695119756,0.657751618414705,1.10540007114339,0.289803085735052,4.74517002118593,2.40786745280742,7.31748666634838,0.906474741580529,5.74830740402882,3.09264700934367,2.78321661221453,1.91139248594458,2.60433381542567,0.950452044448374,0.301150238155546,1.27986611154418,2.49861453104692,1.18388626022008,1.64225599384209,1.41124720257313,2.94184215361858,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00830311041218,11.4398982156026,7.4291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,3.45004119775228,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.15714200818617,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.8300481571743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.476463550915578,1.23408681925858,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,3.53026032738866,2.01976898167023,1.70740424036194,0.159426272728822,0.798317485731266,0.5745161103971,2.11673582723883,0,0.561594356226918,0,0.626719583092093,5.01268954180134,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,1.10776324914963,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0.166211681900156,0,0,0,0.189753732724185,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19646015196032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,2.19226677085613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60243758504136,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,0,0,0,0,0,0,0,0,2.30467975111558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,1.12780701575824,0.386747327841463,0.399764623699716,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42095601639213,1.11734485732544,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr3:107844539..107844555,- | |||
}} |
Revision as of 20:24, 21 January 2014
Short description: | p@chr3:107844539..107844555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:107844539..107844555, - |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.71e-08 | 371 |
thymus | 9.37e-07 | 4 |
hemolymphoid system gland | 9.37e-07 | 4 |
thymic region | 9.37e-07 | 4 |
pharyngeal gland | 9.37e-07 | 4 |
thymus primordium | 9.37e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.64e-07 | 10 |