FFCP PHASE1:Hg19::chr4:24053554..24053559,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C449 | |||
|description=CAGE_peak_at_chr4:24053554..24053559,- | |||
|id=chr4:24053554..24053559,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.64e-26;1!UBERON:0003056;1.60e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;3.83e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.90e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002020!7.34e-24!34;UBERON:0003528!7.34e-24!34;UBERON:0001893!4.38e-21!34;UBERON:0002780!4.45e-21!41;UBERON:0001890!4.45e-21!41;UBERON:0006240!4.45e-21!41;UBERON:0001049!1.17e-20!57;UBERON:0005068!1.17e-20!57;UBERON:0006241!1.17e-20!57;UBERON:0007135!1.17e-20!57;UBERON:0007023!1.18e-20!115;UBERON:0003080!1.90e-20!42;UBERON:0001869!2.70e-20!32;UBERON:0002616!9.92e-20!59;UBERON:0002791!1.47e-19!33;UBERON:0000073!1.17e-17!94;UBERON:0001016!1.17e-17!94;UBERON:0000955!5.53e-17!69;UBERON:0006238!5.53e-17!69;UBERON:0003056!1.22e-16!61;UBERON:0005743!4.74e-16!86;UBERON:0002619!5.33e-16!22;UBERON:0001017!6.53e-16!82;UBERON:0001950!4.43e-15!20;UBERON:0003075!6.43e-15!86;UBERON:0007284!6.43e-15!86;UBERON:0002346!6.25e-14!90;UBERON:0000956!9.09e-14!25;UBERON:0000203!9.09e-14!25;UBERON:0002308!9.48e-13!9;UBERON:0000125!9.48e-13!9;UBERON:0000033!8.09e-11!123;UBERON:0000153!8.99e-11!129;UBERON:0007811!8.99e-11!129;UBERON:0000200!1.14e-10!6;UBERON:0002420!2.03e-09!9;UBERON:0007245!2.03e-09!9;UBERON:0010009!2.03e-09!9;UBERON:0010011!2.03e-09!9;UBERON:0000454!2.03e-09!9;UBERON:0004121!3.91e-09!169;UBERON:0002771!8.30e-09!3;UBERON:0000924!9.94e-09!173;UBERON:0006601!9.94e-09!173;UBERON:0009663!1.39e-08!7;UBERON:0006331!3.65e-08!3;UBERON:0001871!7.23e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.16e-26;1!UBERON:0005056;2.16e-26;1!UBERON:0004176;2.16e-26;1!UBERON:0000941;8.64e-26;1!UBERON:0001785;8.64e-26;1!UBERON:0002464;8.64e-26;1!UBERON:0004904;8.64e-26;1!UBERON:0001021;8.64e-26;1!UBERON:0001905;1.29e-13;2!UBERON:0003714;1.29e-13;2!UBERON:0005162;1.29e-13;2!UBERON:0000122;1.29e-13;2!UBERON:0002757;1.29e-13;2!UBERON:0010134;1.29e-13;2!UBERON:0005408;1.29e-13;2!UBERON:0001899;1.29e-13;2!UBERON:0002368;1.09e-07;33!UBERON:0003296;1.86e-07;4!UBERON:0010133;1.86e-07;4!UBERON:0002784;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.16e-26,1;UBERON:0005056,2.16e-26,1;UBERON:0000941,7.62e-26,1;UBERON:0001785,7.62e-26,1;UBERON:0002464,7.62e-26,1;UBERON:0004904,7.62e-26,1;UBERON:0001021,7.62e-26,1;UBERON:0003902,7.62e-26,1;UBERON:0005425,7.62e-26,1;UBERON:0001905,1.07e-13,2;UBERON:0002757,1.07e-13,2;UBERON:0010134,1.07e-13,2;UBERON:0005408,1.07e-13,2;UBERON:0001899,1.07e-13,2;UBERON:0003714,1.21e-13,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0003296,1.69e-07,4;UBERON:0010133,1.69e-07,4;UBERON:0002784,1.69e-07,4;UBERON:0001781,1.80e-07,4;UBERON:0002368,5.08e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,3.1668811219199,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.442317039724898,0.591095237907095,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.64340699832146,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,1.32506888912221,0.775697738169303,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.625954653532499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.957803154342908,0.82046545696302,0,0,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0.620060389503552,0.253663240775627,0,0,0,0,0,1.60710550763486,0,0,0,0,0,0,0,0.328863867814245,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.62164849248911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:24053554..24053559,- | |||
}} |
Revision as of 00:29, 22 January 2014
Short description: | p@chr4:24053554..24053559, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:24053554..24053559, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.16e-26 | 1 |
external female genitalia | 2.16e-26 | 1 |
cranial nerve II | 7.62e-26 | 1 |
cranial nerve | 7.62e-26 | 1 |
nerve trunk | 7.62e-26 | 1 |
nerve connecting eye with brain | 7.62e-26 | 1 |
nerve | 7.62e-26 | 1 |
retinal neural layer | 7.62e-26 | 1 |
presumptive neural retina | 7.62e-26 | 1 |
pineal body | 1.07e-13 | 2 |
regional part of epithalamus | 1.07e-13 | 2 |
secretory circumventricular organ | 1.07e-13 | 2 |
circumventricular organ | 1.07e-13 | 2 |
epithalamus | 1.07e-13 | 2 |
neural tissue | 1.21e-13 | 2 |
multi cell component structure | 1.21e-13 | 2 |
neuron projection bundle | 1.21e-13 | 2 |
gland of diencephalon | 1.69e-07 | 4 |
neuroendocrine gland | 1.69e-07 | 4 |
regional part of diencephalon | 1.69e-07 | 4 |
layer of retina | 1.80e-07 | 4 |
endocrine gland | 5.08e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.90e-08 | 14 |