FFCP PHASE1:Hg19::chr5:64777604..64777636,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=222 | |||
|TSSclassifier=strong | |||
|UniProt=C9JX62,Q5IR90,Q9UKP5 | |||
|association_with_transcript=67bp_to_ENST00000261306,ENST00000536360,NM_197941,uc003jtp.2,uc003jtq.2_5end | |||
|description=CAGE_peak_4_at_ADAMTS6_5end | |||
|id=chr5:64777604..64777636,- | |||
|ontology_enrichment_celltype=CL:0000055!7.11e-34!180;CL:0000057!1.56e-22!75;CL:0000222!2.03e-19!119;CL:0000680!1.92e-16!57;CL:0000056!1.92e-16!57;CL:0000355!1.92e-16!57;CL:0000187!1.22e-15!54;CL:0000359!1.02e-14!32;CL:0000183!1.14e-14!59;CL:0000192!3.54e-14!42;CL:0000514!3.54e-14!42;CL:0002620!8.32e-14!23;CL:0000393!1.06e-12!60;CL:0000211!1.06e-12!60;CL:0000220!8.48e-09!246;CL:0002321!1.14e-08!248;CL:0002371!3.90e-08!591;CL:0000144!1.43e-07!625;CL:0002539!2.42e-07!10;CL:0000723!9.08e-07!436;CL:0000048!9.97e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.09e-18;32!CL:0002620;1.56e-17;23!CL:0000192;1.44e-13;43!CL:0000057;8.63e-11;73!CL:0000187;1.78e-10;55!CL:0002539;3.78e-10;10!CL:0000393;1.14e-08;61!CL:0000211;1.14e-08;61!CL:0002320;6.19e-07;188!CL:0002494;6.50e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.52e-29,76;CL:0000359,7.95e-20,32;CL:0000187,2.95e-18,55;CL:0000680,7.20e-18,58;CL:0000056,7.20e-18,58;CL:0000355,7.20e-18,58;CL:0002620,1.31e-17,23;CL:0000192,8.02e-17,43;CL:0000514,8.02e-17,43;CL:0000222,3.57e-16,121;CL:0000048,5.82e-16,427;CL:0000723,1.25e-15,433;CL:0000393,3.11e-15,61;CL:0000211,3.11e-15,61;CL:0000034,1.25e-14,441;CL:0002539,2.64e-10,10;CL:0002494,8.26e-07,16;CL:0002321,9.85e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.44e-13;43!CL:0000355;8.77e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!6.93e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.59e-09;14!DOID:17;6.80e-07;5!DOID:450;6.80e-07;5!DOID:66;6.80e-07;5!DOID:423;6.80e-07;5!DOID:0080000;6.80e-07;5!DOID:11722;6.80e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.33e-09,14;DOID:17,6.02e-07,5;DOID:450,6.02e-07,5;DOID:66,6.02e-07,5;DOID:423,6.02e-07,5;DOID:0080000,6.02e-07,5;DOID:11722,6.02e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.21e-21!84;UBERON:0002049!4.75e-20!79;UBERON:0007798!4.75e-20!79;UBERON:0001981!7.24e-20!60;UBERON:0007500!7.24e-20!60;UBERON:0004537!7.24e-20!60;UBERON:0006965!7.24e-20!60;UBERON:0001637!8.23e-20!42;UBERON:0003509!8.23e-20!42;UBERON:0004572!8.23e-20!42;UBERON:0000055!5.85e-19!69;UBERON:0004573!8.62e-19!33;UBERON:0004571!8.62e-19!33;UBERON:0000914!8.72e-18!83;UBERON:0002329!8.72e-18!83;UBERON:0003077!8.72e-18!83;UBERON:0003059!8.72e-18!83;UBERON:0007282!8.72e-18!83;UBERON:0009618!8.72e-18!83;UBERON:0007285!8.72e-18!83;UBERON:0004290!3.02e-17!70;UBERON:0000486!5.28e-17!82;UBERON:0004535!2.32e-15!110;UBERON:0002385!2.45e-15!63;UBERON:0001015!2.45e-15!63;UBERON:0000383!2.45e-15!63;UBERON:0001134!5.67e-15!61;UBERON:0002036!5.67e-15!61;UBERON:0003082!5.67e-15!61;UBERON:0001009!3.38e-14!113;UBERON:0000490!4.36e-12!138;UBERON:0000947!8.52e-12!21;UBERON:0010191!8.52e-12!21;UBERON:0003914!1.28e-11!118;UBERON:0002097!4.49e-10!40;UBERON:0005256!1.10e-09!143;UBERON:0002199!2.71e-09!45;UBERON:0002416!2.71e-09!45;UBERON:0000119!3.01e-09!312;UBERON:0000483!3.48e-09!309;UBERON:0001135!5.10e-08!15;UBERON:0003102!2.11e-07!95;UBERON:0004237!2.42e-07!10;UBERON:0004695!2.42e-07!10;UBERON:0002111!2.42e-07!10;UBERON:0004178!2.42e-07!10;UBERON:0000468!5.77e-07!659;UBERON:0000467!8.43e-07!625;UBERON:0000475!9.51e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.24e-21;33!UBERON:0004571;1.24e-21;33!UBERON:0001637;1.86e-15;42!UBERON:0003509;1.86e-15;42!UBERON:0004572;1.86e-15;42!UBERON:0000947;2.29e-13;21!UBERON:0010191;2.29e-13;21!UBERON:0007500;5.30e-12;56!UBERON:0001981;5.30e-12;56!UBERON:0004537;5.30e-12;56!UBERON:0004237;3.78e-10;10!UBERON:0004695;3.78e-10;10!UBERON:0002111;3.78e-10;10!UBERON:0004178;3.78e-10;10!UBERON:0002385;5.24e-10;31!UBERON:0001015;5.24e-10;31!UBERON:0000383;5.24e-10;31!UBERON:0000055;1.50e-09;65!UBERON:0001135;1.83e-09;15!UBERON:0002097;8.21e-09;41!UBERON:0002049;1.24e-07;75!UBERON:0007798;1.24e-07;75!UBERON:0002199;1.26e-07;46!UBERON:0002416;1.26e-07;46!UBERON:0002384;8.95e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.12e-23,33;UBERON:0004571,1.12e-23,33;UBERON:0004872,1.25e-21,83;UBERON:0001637,2.29e-21,42;UBERON:0003509,2.29e-21,42;UBERON:0004572,2.29e-21,42;UBERON:0002329,5.71e-19,71;UBERON:0003059,5.71e-19,71;UBERON:0007282,5.71e-19,71;UBERON:0004290,5.71e-19,71;UBERON:0009618,5.71e-19,71;UBERON:0007500,9.11e-19,59;UBERON:0001981,9.11e-19,59;UBERON:0004537,9.11e-19,59;UBERON:0006965,9.11e-19,59;UBERON:0000055,1.60e-18,68;UBERON:0003077,1.69e-18,72;UBERON:0007285,1.69e-18,72;UBERON:0007524,4.85e-18,73;UBERON:0002049,9.56e-18,78;UBERON:0007798,9.56e-18,78;UBERON:0000486,5.80e-17,83;UBERON:0002385,5.96e-17,64;UBERON:0001015,5.96e-17,64;UBERON:0000383,5.96e-17,64;UBERON:0001134,7.07e-17,62;UBERON:0002036,7.07e-17,62;UBERON:0003082,7.07e-17,62;UBERON:0004535,4.68e-16,109;UBERON:0007503,6.03e-16,78;UBERON:0001009,3.67e-15,112;UBERON:0000947,2.49e-13,21;UBERON:0010191,2.49e-13,21;UBERON:0003914,2.00e-11,117;UBERON:0000490,2.13e-11,148;UBERON:0002097,2.81e-11,41;UBERON:0002199,4.53e-11,46;UBERON:0002416,4.53e-11,46;UBERON:0004237,2.64e-10,10;UBERON:0004695,2.64e-10,10;UBERON:0002111,2.64e-10,10;UBERON:0004178,2.64e-10,10;UBERON:0001135,1.15e-09,15;UBERON:0005256,8.16e-09,122;UBERON:0000926,3.76e-08,315;UBERON:0004120,3.76e-08,315;UBERON:0006603,3.76e-08,315 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,1.96597234917155,1.58260186937072,0,0,2.01697543935533,2.41077811209591,3.65155045193687,3.41552959153355,0.123121058076788,0,0,0,0,0.87879847716362,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14446559053763,2.00535164254356,3.33146993609895,19.8821486762775,35.0377106617898,0.283604451492204,0.443458794925128,1.05401742831751,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,1.39133685156694,3.4409383804245,0.694281003215189,1.13061588384802,0.838998872419812,0.825354125820202,0.835979866147242,0,0,1.67360306382335,2.41697590265488,1.52054421143703,1.22031028774085,1.10298924103761,0.81014194788176,0.803697554556718,1.12264686313085,1.46394924628319,3.06633274931766,0,0.916008719652036,0,0,0,8.44852317882041,3.67228483827281,13.2409180813219,28.1099888333837,4.25602058638028,1.12135520028461,2.1349799145941,1.2333377420858,0.311211035399766,2.15537075311501,1.79808093424805,0.151357427644931,0,0.937285727335186,0.624320153660641,0.570471821544449,1.04614076386261,3.87533845524424,2.75184005425824,1.96631129383148,0.816616685019573,0.368502951935304,0.309977343527296,1.18800285728205,2.96720315134268,1.82032272387605,0,1.17835279767846,1.37630371859161,2.21651292387346,3.95079858792754,3.98434134538726,1.05166641234618,1.13432183160021,17.9389635688862,2.56268866582281,5.51022943014861,25.5077431671742,6.38925681278321,10.0479810617795,2.60563598864226,22.7848048525709,4.09235421677034,25.7482449728997,4.87864462804187,1.13152239773168,26.6257194387461,2.72030665214629,3.22165125389926,0.193260853163297,0,0.573609190778008,0.121973706129595,0,0,0,0,0,3.12899064659632,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.878002283269004,1.1240175325762,0.603173834469785,0,0,0,1.44331342025273,0.231860809950154,0.352226082707465,2.30986316417718,0.462985512576611,2.09279567458058,0,0,0,0,0,0,0.335964256397719,0.283550194484773,2.23896306757121,1.16253575405585,0.766765358330422,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.80672114403045,1.55126058909333,0,2.535908257668,1.59562869950922,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,1.64648067356154,0.65147236858747,0,0,0.904318131178758,0.871533458600294,1.49959486773086,0,0,0,0.958499421966331,0,1.42636905040718,0.868687840005475,0.410952645100767,3.04403637507822,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,1.66376689224646,3.21172179834891,1.89242898040722,3.04567678981054,0.601892199455438,0,0,1.99267679560631,2.39679919104214,0.955719759148911,0,0,0,0.215714200818617,0,0.303127571446259,0,1.20956117331872,3.47350930946288,3.6830873589135,0.280660094433074,0.768834895534206,1.02341449813341,2.41280881715411,0,2.62156479464514,1.9531789784444,4.27061211271807,6.75030757938707,1.85936605535935,0,0,0.0920809889358963,0.34444334449382,2.36718518408732,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0.510281115829547,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.082509499920588,0,0.650060246036521,4.82051789532479,3.19013370364003,0.924291702687866,1.5350367472613,4.41077031950498,0.751941714077915,1.30515024522806,2.30111894023472,2.31483292681517,0.165284915360978,0.576570202095319,1.53135254993501,0,2.78907329578371,23.2961136654674,2.7881490806424,6.16067160352178,2.66153015158511,4.34966496037536,2.7798632865588,4.15062171551775,0,2.21465597303108,1.33441135746677,0.511795582622668,0,2.54562598340749,7.8494864019923,0.359744915166629,1.64722217841633,1.06031162111118,1.2130948894399,1.58510321173008,3.37006764991185,0,4.87426979262569,4.22600587027022,1.09199929126389,0.848432591722276,1.13008116620243,7.16774946609961,5.30751180192976,3.5076070820301,0,0,0.608731130888112,1.239293992399,3.66204283291914,0.860468113224309,1.27723753317057,0,5.32141596105897,3.16661452946496,5.92730807327823,0.75894634753143,1.39973888097993,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849523652246594,0,0,0.95497793895076,3.56357616999166,0.307160702099232,0.994147647766298,0,3.7844959707788,0,0,0.796991953004279,0.552567831062295,0,0,0,2.17727711363265,0.359473404589307,0,0,0.690503839458535,0,1.11136990144637,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,2.27884111694002,0,0,0,0.957003479195758,0.274792780205587,2.66517388009317,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0.611030144933625,0,0,0,0.06740113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| |||
|short_description=p4@ADAMTS6 | |||
}} |
Revision as of 05:40, 22 January 2014
Short description: | p4@ADAMTS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADAMTS6_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_ENST00000261306, ENST00000536360, NM_197941, uc003jtp.2, uc003jtq.2_5end |
EntrezGene: | ADAMTS6 |
HGNC: | 222 |
UniProt: | C9JX62Q5IR90Q9UKP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.52e-29 | 76 |
vascular associated smooth muscle cell | 7.95e-20 | 32 |
muscle cell | 2.95e-18 | 55 |
muscle precursor cell | 7.20e-18 | 58 |
myoblast | 7.20e-18 | 58 |
multi-potent skeletal muscle stem cell | 7.20e-18 | 58 |
skin fibroblast | 1.31e-17 | 23 |
smooth muscle cell | 8.02e-17 | 43 |
smooth muscle myoblast | 8.02e-17 | 43 |
mesodermal cell | 3.57e-16 | 121 |
multi fate stem cell | 5.82e-16 | 427 |
somatic stem cell | 1.25e-15 | 433 |
electrically responsive cell | 3.11e-15 | 61 |
electrically active cell | 3.11e-15 | 61 |
stem cell | 1.25e-14 | 441 |
aortic smooth muscle cell | 2.64e-10 | 10 |
cardiocyte | 8.26e-07 | 16 |
embryonic cell | 9.85e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.33e-09 | 14 |
musculoskeletal system disease | 6.02e-07 | 5 |
myotonic disease | 6.02e-07 | 5 |
muscle tissue disease | 6.02e-07 | 5 |
myopathy | 6.02e-07 | 5 |
muscular disease | 6.02e-07 | 5 |
myotonic dystrophy | 6.02e-07 | 5 |