FFCP PHASE1:Hg19::chr5:76383070..76383117,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20711 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IU2 | |||
|association_with_transcript=30bp_to_ENST00000255198_5end | |||
|description=CAGE_peak_3_at_ZBED3_5end | |||
|id=chr5:76383070..76383117,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.88e-14!94;UBERON:0001016!8.88e-14!94;UBERON:0005743!1.94e-12!86;UBERON:0001017!3.70e-11!82;UBERON:0000955!6.31e-10!69;UBERON:0006238!6.31e-10!69;UBERON:0003080!1.68e-09!42;UBERON:0001049!1.88e-09!57;UBERON:0005068!1.88e-09!57;UBERON:0006241!1.88e-09!57;UBERON:0007135!1.88e-09!57;UBERON:0002780!4.79e-09!41;UBERON:0001890!4.79e-09!41;UBERON:0006240!4.79e-09!41;UBERON:0002616!1.43e-08!59;UBERON:0002346!1.53e-08!90;UBERON:0001893!3.14e-08!34;UBERON:0002791!4.86e-08!33;UBERON:0003056!6.81e-08!61;UBERON:0002020!7.33e-08!34;UBERON:0003528!7.33e-08!34;UBERON:0003075!1.33e-07!86;UBERON:0007284!1.33e-07!86;UBERON:0001869!2.75e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.34e-08;34!UBERON:0002791;8.52e-08;32!UBERON:0002780;1.04e-07;41!UBERON:0001890;1.04e-07;41!UBERON:0001869;1.48e-07;32!UBERON:0003528;1.48e-07;34!UBERON:0002020;1.48e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.42e-13,223;UBERON:0001016,7.01e-12,89;UBERON:0001017,6.27e-11,81;UBERON:0002346,1.90e-10,86;UBERON:0000955,7.23e-10,68;UBERON:0006238,7.23e-10,68;UBERON:0001049,7.77e-10,56;UBERON:0005068,7.77e-10,56;UBERON:0006241,7.77e-10,56;UBERON:0007135,7.77e-10,56;UBERON:0002780,8.43e-10,41;UBERON:0001890,8.43e-10,41;UBERON:0003080,8.43e-10,41;UBERON:0006240,8.43e-10,41;UBERON:0000073,1.07e-09,53;UBERON:0002616,1.07e-09,53;UBERON:0001893,1.97e-09,34;UBERON:0003075,2.54e-09,82;UBERON:0007284,2.54e-09,82;UBERON:0003528,5.27e-09,34;UBERON:0002020,5.27e-09,34;UBERON:0003056,1.00e-08,61;UBERON:0002791,1.16e-08,32;UBERON:0001869,2.40e-08,32 | |||
|phase1_expression=0.54503513781167,2.99740733447376,1.69145284915165,0,3.5756887554183,0,0,1.26343974685366,16.7158802047897,0.737201809504527,0,0.218441372130172,0,6.80714941280256,6.62794751455832,1.34465029290355,0,0.730310090387373,0.487932798790507,2.21617904538218,0,2.19418305034661,3.14859585844162,1.36874425072884,1.50651167513763,2.36881557818649,1.39571002064908,1.57421562627358,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,7.04641054403633,0.553995408531877,0.802177789880567,0.651032612147555,2.01523926815932,0.971680998056939,2.83333124397605,2.61716829803216,1.88937971844405,1.21292030593908,1.62700325833979,0.822335776043652,1.23882548358041,1.1507695692886,1.5369642391746,0.945928919554341,0,0,1.35426486594342,1.88242339542605,0.818718450173537,1.34834090667051,0.612167784741805,0.320929027076094,0,0.659702600373432,1.39624560335142,2.13112375266347,0.580418477257168,0.56738522469114,0,1.50749199154046,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0,0.419317291016752,1.68492946719743,1.50176892841506,0.48217676009124,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0,0,2.64342657158052,4.48406850385229,6.58460211937693,0.983548850569165,0.393010762749165,0.205601498999509,0,0.977766799900771,0,0,0,0.294605907474837,0,0,0,0,0,0,0,1.03800594213442,1.07016331235885,1.04535523804977,0,0,0.34362744548263,0,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.80642697289893,0,1.30341963494519,4.87613732627923,4.02420515822182,1.79007586580942,1.0843174571537,1.00267582127178,0.869079113764942,0,0.973269740605272,1.03988298880475,0.443458794925128,0.790513071238134,2.29213382120997,0,0,2.59637914923747,2.43781632218974,2.26028532882071,1.66943437013739,2.28797964312051,1.85728750664782,0.79504962946682,0.860234595106124,0.694281003215189,1.69592382577203,0.419499436209906,1.6507082516404,1.25396979922086,1.29208379584664,1.77883131343355,2.34304428935269,0.805658634218294,0.760272105718513,0.24406205754817,0.735326160691737,0.81014194788176,1.51809538082936,0.44905874525234,1.12611480483322,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.397227542439656,2.29469296599051,0,0,0,1.2333377420858,1.8672662123986,1.88594940897563,0.980771418680752,0.454072282934794,1.72852777344,7.26396438684769,0.312160076830321,0,0,0.939475989150119,0.647491777472526,0.280901613404497,0.408308342509787,0.737005903870608,2.47981874821837,3.56400857184616,1.23633464639278,0.910161361938026,2.15585442544872,0.673344455816265,0.750711119231785,0,0,0.30648779579902,0.45071417671979,1.02088964844019,0.179389635688862,0.640672166455702,0.211931901159562,0.600182192168805,0.309157587715317,0.257640540045629,0.37223371266318,1.0126579934476,0.292311015483596,0.252433774244115,0.276149695926898,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0,0,1.09776335516636,1.85541675650079,2.09149097165133,0.829288440122964,1.7662459561294,1.45990943630332,0,0,0,0.464367928031979,0.721879481669586,3.31259040111563,3.03452442140583,4.33819853790268,4.19117096383097,2.83243277320128,2.37270619111097,3.37078270400411,3.13954344200554,2.30848294167834,0,0,0.8231480226628,0,5.07020139287323,4.91413608338813,2.95394953340702,0,4.79654910318143,0.343135620597051,0.219500570817251,1.1240175325762,0,0.555530670951178,3.25808305310325,2.07986957055916,0,1.15930404975077,0.352226082707465,0.577465791044295,0.925971025153221,1.52203321787679,0,0,2.21595305478658,0.936017060556951,1.93220510975347,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0.383382679165211,0,0.088048434013226,0.207328115540772,0.432359860250884,0.37872730027914,0.761974731506028,1.14596527667483,0,3.4214489204541,0.719792448923265,0.600686115687835,0.857479297891735,1.34557301214433,0.87192013766656,0.36669142910475,0,3.57656445851882,0,1.06375246633948,0,2.05765899409714,1.41849132023278,2.66422179016099,1.42977993658148,2.71310802695722,3.29296134712308,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0.199945982364114,2.43247561282381,3.51579964002488,2.10833939483032,0.718874566474748,1.14861935834114,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0.591092280605782,0,0.898401253958239,3.30323011489202,2.60279707715243,1.54657762555539,3.35032530668698,1.91381625495949,0,0,0,3.55805325985506,7.00238729483548,2.98391526069709,1.45579603071565,1.07057393278297,1.10391690523754,0.819989904948992,2.70851489754947,2.27407504055985,5.17365356462525,0.664225598535437,0.553107505625109,1.21637060255316,6.2656370388077,3.43143423810856,1.24060815673732,0.431428401637234,0.320182673410333,0,0,0.604780586659361,0.248107807818777,0.460385919864187,0,1.15325234330131,0.511707249066704,0.804269605718038,0,0,0.177561725313127,0,0,0,4.47179963489002,0,1.56537681191024,0.803701137152247,2.00300284807389,1.31124414959424,3.15839729035188,1.07821471946181,3.13739907670742,7.30696123266303,2.21658420675039,0,0.6803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| |||
|short_description=p3@ZBED3 | |||
}} |
Revision as of 06:04, 22 January 2014
Short description: | p3@ZBED3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZBED3_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000255198_5end |
EntrezGene: | ZBED3 |
HGNC: | 20711 |
UniProt: | Q96IU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.42e-13 | 223 |
nervous system | 7.01e-12 | 89 |
central nervous system | 6.27e-11 | 81 |
neurectoderm | 1.90e-10 | 86 |
brain | 7.23e-10 | 68 |
future brain | 7.23e-10 | 68 |
neural tube | 7.77e-10 | 56 |
neural rod | 7.77e-10 | 56 |
future spinal cord | 7.77e-10 | 56 |
neural keel | 7.77e-10 | 56 |
regional part of forebrain | 8.43e-10 | 41 |
forebrain | 8.43e-10 | 41 |
anterior neural tube | 8.43e-10 | 41 |
future forebrain | 8.43e-10 | 41 |
regional part of nervous system | 1.07e-09 | 53 |
regional part of brain | 1.07e-09 | 53 |
telencephalon | 1.97e-09 | 34 |
neural plate | 2.54e-09 | 82 |
presumptive neural plate | 2.54e-09 | 82 |
brain grey matter | 5.27e-09 | 34 |
gray matter | 5.27e-09 | 34 |
pre-chordal neural plate | 1.00e-08 | 61 |
regional part of telencephalon | 1.16e-08 | 32 |
cerebral hemisphere | 2.40e-08 | 32 |