FFCP PHASE1:Hg19::chr5:137203541..137203556,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12399 | |||
|TSSclassifier=strong | |||
|UniProt=B4DT79,Q9UBF9 | |||
|association_with_transcript=0bp_to_ENST00000421631,ENST00000509812,ENST00000511625,NM_001135940,NM_006790,uc003lbv.2,uc011cyg.1,uc011cyh.1_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_2_at_MYOT_5end | |||
|id=chr5:137203541..137203556,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.27e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.47e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.15e-75!115;UBERON:0001049!5.71e-47!57;UBERON:0005068!5.71e-47!57;UBERON:0006241!5.71e-47!57;UBERON:0007135!5.71e-47!57;UBERON:0002616!7.54e-38!59;UBERON:0001017!3.06e-37!82;UBERON:0003075!4.28e-37!86;UBERON:0007284!4.28e-37!86;UBERON:0005743!1.33e-36!86;UBERON:0002780!1.22e-35!41;UBERON:0001890!1.22e-35!41;UBERON:0006240!1.22e-35!41;UBERON:0002346!7.61e-35!90;UBERON:0003080!1.37e-34!42;UBERON:0000955!4.16e-34!69;UBERON:0006238!4.16e-34!69;UBERON:0001893!9.93e-33!34;UBERON:0002020!1.08e-32!34;UBERON:0003528!1.08e-32!34;UBERON:0000073!6.63e-32!94;UBERON:0001016!6.63e-32!94;UBERON:0002791!3.13e-31!33;UBERON:0001869!2.07e-29!32;UBERON:0000153!2.48e-26!129;UBERON:0007811!2.48e-26!129;UBERON:0002619!5.40e-25!22;UBERON:0000033!5.93e-24!123;UBERON:0003056!1.12e-22!61;UBERON:0004121!2.93e-22!169;UBERON:0001950!7.72e-22!20;UBERON:0000956!1.75e-21!25;UBERON:0000203!1.75e-21!25;UBERON:0000924!2.15e-21!173;UBERON:0006601!2.15e-21!173;UBERON:0003076!3.88e-13!15;UBERON:0003057!3.88e-13!15;UBERON:0002308!5.46e-13!9;UBERON:0000125!5.46e-13!9;UBERON:0004111!1.96e-12!241;UBERON:0000025!6.53e-12!194;UBERON:0000200!2.44e-11!6;UBERON:0002298!4.61e-11!8;UBERON:0000477!1.21e-10!286;UBERON:0002420!5.68e-10!9;UBERON:0007245!5.68e-10!9;UBERON:0010009!5.68e-10!9;UBERON:0010011!5.68e-10!9;UBERON:0000454!5.68e-10!9;UBERON:0009663!7.31e-10!7;UBERON:0000483!9.93e-10!309;UBERON:0000119!1.73e-09!312;UBERON:0000475!3.04e-09!365;UBERON:0000481!3.43e-09!347;UBERON:0001872!5.30e-09!5;UBERON:0004733!7.04e-09!12;UBERON:0002028!7.04e-09!12;UBERON:0007277!7.04e-09!12;UBERON:0000064!4.13e-08!219;UBERON:0004732!4.38e-08!13;UBERON:0000062!1.34e-07!511;UBERON:0004151!4.98e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;7.21e-10;2!UBERON:0001630;7.21e-10;2!UBERON:0000341;1.06e-09;2!UBERON:0003127;2.38e-09;2!UBERON:0001829;4.66e-09;2!UBERON:0001875;6.69e-09;2!UBERON:0006514;6.69e-09;2!UBERON:0007023;1.90e-08;114!UBERON:0002702;2.26e-08;2!UBERON:0000125;4.16e-07;9!UBERON:0002308;4.16e-07;9!UBERON:0001723;8.84e-07;3!UBERON:0001033;8.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.84e-32,114;UBERON:0001049,1.61e-11,56;UBERON:0005068,1.61e-11,56;UBERON:0006241,1.61e-11,56;UBERON:0007135,1.61e-11,56;UBERON:0005090,7.22e-10,2;UBERON:0001630,7.22e-10,2;UBERON:0000341,1.06e-09,2;UBERON:0003127,2.33e-09,2;UBERON:0000073,4.52e-09,53;UBERON:0002616,4.52e-09,53;UBERON:0001829,4.66e-09,2;UBERON:0001875,6.96e-09,2;UBERON:0006514,6.96e-09,2;UBERON:0010314,7.38e-09,132;UBERON:0002702,2.44e-08,2;UBERON:0001017,4.58e-08,81;UBERON:0000955,1.37e-07,68;UBERON:0006238,1.37e-07,68;UBERON:0003528,2.53e-07,34;UBERON:0002020,2.53e-07,34;UBERON:0001893,2.79e-07,34;UBERON:0002780,3.00e-07,41;UBERON:0001890,3.00e-07,41;UBERON:0003080,3.00e-07,41;UBERON:0006240,3.00e-07,41;UBERON:0003103,3.49e-07,68;UBERON:0000125,3.90e-07,9;UBERON:0002308,3.90e-07,9;UBERON:0001016,5.90e-07,89;UBERON:0003075,6.22e-07,82;UBERON:0007284,6.22e-07,82;UBERON:0001723,8.84e-07,3;UBERON:0001033,8.84e-07,3;UBERON:0010056,8.84e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,2.67096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,1.4098700508785,0,9.8160480112169,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.774054819518572,0.591095237907095,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,1.01101699471016,376.408916583132,0.937057782901357,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,19.3946601748653,0,0,0,0,22.7924188747786,0,22.1461125964922,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,8.48813349130357,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,4.19325901047881,11.1598772515508,2.23171457441873,2.5529719544956,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,42.1670242560287,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.85125642439766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.610131324509816,1.1267183763585,1.14681839138014,1.22021956690538,0.124192805882767,5.67229403238546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,3.35231104020018,0,0.252071696221718,0.484100767249525,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.620060389503552,0.19024743058172,0.546974809018219,3.28954660114309,213.867017885786,0,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,2.09234565662625,0.173858272302579,0,0,0,0,3.01159151174194,0,0,0,0,0,0,0,0,0,1072.14215438315,539.185061609009,142.657175054598,39.8283014308494,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,1.78227840196252,1.6906229103336,0,0,0,0,0,0,0,0,15.1380663523498,6.16360207551241,0,0.203974470572744,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,1.74291005901951,0,0.829169439458779,4.2407528303377,352.689006064222,95.9399658798874,0,0.744896571550295,0,7.51036467682346,17.3820782504069,303.06171307257,446.272224615206,18.7912227910699,8.82183126329919,57.2175813259143,0,0,0,0,18.7712753922763,0,0,0,10.8687848539154,0 | |||
|short_description=p2@MYOT | |||
}} |
Revision as of 07:38, 22 January 2014
Short description: | p2@MYOT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYOT_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000421631, ENST00000509812, ENST00000511625, NM_001135940, NM_006790, uc003lbv.2, uc011cyg.1, uc011cyh.1_5end |
EntrezGene: | MYOT |
HGNC: | 12399 |
UniProt: | B4DT79Q9UBF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.84e-32 | 114 |
neural tube | 1.61e-11 | 56 |
neural rod | 1.61e-11 | 56 |
future spinal cord | 1.61e-11 | 56 |
neural keel | 1.61e-11 | 56 |
muscle structure | 7.22e-10 | 2 |
muscle organ | 7.22e-10 | 2 |
throat | 1.06e-09 | 2 |
open tracheal system trachea | 2.33e-09 | 2 |
regional part of nervous system | 4.52e-09 | 53 |
regional part of brain | 4.52e-09 | 53 |
major salivary gland | 4.66e-09 | 2 |
globus pallidus | 6.96e-09 | 2 |
pallidum | 6.96e-09 | 2 |
structure with developmental contribution from neural crest | 7.38e-09 | 132 |
middle frontal gyrus | 2.44e-08 | 2 |
central nervous system | 4.58e-08 | 81 |
brain | 1.37e-07 | 68 |
future brain | 1.37e-07 | 68 |
brain grey matter | 2.53e-07 | 34 |
gray matter | 2.53e-07 | 34 |
telencephalon | 2.79e-07 | 34 |
regional part of forebrain | 3.00e-07 | 41 |
forebrain | 3.00e-07 | 41 |
anterior neural tube | 3.00e-07 | 41 |
future forebrain | 3.00e-07 | 41 |
compound organ | 3.49e-07 | 68 |
neural nucleus | 3.90e-07 | 9 |
nucleus of brain | 3.90e-07 | 9 |
nervous system | 5.90e-07 | 89 |
neural plate | 6.22e-07 | 82 |
presumptive neural plate | 6.22e-07 | 82 |
tongue | 8.84e-07 | 3 |
gustatory system | 8.84e-07 | 3 |
future tongue | 8.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.47e-09 | 2 |