FFCP PHASE1:Hg19::chr6:36644021..36644043,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1784 | |||
|TSSclassifier=weak | |||
|UniProt=P38936,Q6FI05 | |||
|association_with_transcript=-193bp_to_NM_001220777_5end | |||
|description=CAGE_peak_9_at_CDKN1A_5end | |||
|id=chr6:36644021..36644043,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.06e-20!182;CL:0002194!7.70e-20!63;CL:0000576!7.70e-20!63;CL:0000040!7.70e-20!63;CL:0000559!7.70e-20!63;CL:0002032!8.94e-20!165;CL:0000837!8.94e-20!165;CL:0000738!1.37e-19!140;CL:0000763!3.25e-19!112;CL:0000049!3.25e-19!112;CL:0002009!4.81e-19!65;CL:0000839!6.99e-19!70;CL:0000766!1.33e-18!76;CL:0000037!1.52e-18!172;CL:0000566!1.52e-18!172;CL:0000557!1.58e-18!71;CL:0002031!1.61e-17!124;CL:0002087!2.50e-17!119;CL:0002057!2.75e-17!42;CL:0000860!7.89e-16!45;CL:0000990!3.90e-12!8;CL:0000451!8.86e-10!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.73e-44;33!CL:0002057;2.73e-44;33!CL:0000473;5.86e-30;39!CL:0000234;5.86e-30;39!CL:0000576;7.60e-23;48!CL:0000840;4.51e-16;5!CL:0000766;2.31e-13;69!CL:0000990;6.68e-11;8!CL:0000451;5.19e-09;10!CL:0000988;4.93e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.17e-40,59;CL:0000576,4.17e-40,59;CL:0000040,4.17e-40,59;CL:0000559,4.17e-40,59;CL:0002009,9.67e-39,61;CL:0000860,8.52e-38,42;CL:0002057,8.52e-38,42;CL:0000766,6.84e-37,72;CL:0000839,1.11e-35,66;CL:0000557,3.99e-35,67;CL:0000473,7.69e-33,48;CL:0000234,7.69e-33,48;CL:0000763,6.40e-24,108;CL:0000049,6.40e-24,108;CL:0000988,8.29e-20,177;CL:0002087,1.25e-19,115;CL:0002031,1.02e-18,120;CL:0000738,1.58e-18,136;CL:0000840,4.52e-16,5;CL:0001029,4.52e-16,5;CL:0002032,2.79e-15,161;CL:0000837,2.79e-15,161;CL:0000037,1.53e-14,168;CL:0000990,6.69e-11,8;CL:0000451,5.19e-09,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-27;42!CL:0000049;2.14e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.94e-18!112;UBERON:0002390!1.64e-17!102;UBERON:0003061!1.64e-17!102;UBERON:0002371!9.74e-16!80;UBERON:0002405!2.28e-14!115;UBERON:0001474!3.31e-14!86;UBERON:0004765!3.43e-11!101;UBERON:0001434!3.43e-11!101;UBERON:0003081!7.94e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.36e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.36e-34,98;UBERON:0003061,8.36e-34,98;UBERON:0002371,9.38e-31,76;UBERON:0002193,1.78e-30,108;UBERON:0001474,2.30e-28,82;UBERON:0004765,1.14e-25,90;UBERON:0002405,8.94e-25,93;UBERON:0001434,6.77e-23,100;UBERON:0003081,4.44e-15,203;UBERON:0002204,8.42e-13,167;UBERON:0002331,1.21e-09,10;UBERON:0000358,1.21e-09,10;UBERON:0000307,1.21e-09,10;UBERON:0000091,1.21e-09,10;UBERON:0000087,1.21e-09,10;UBERON:0007010,1.21e-09,10;UBERON:0007806,1.21e-09,10;UBERON:0008780,1.21e-09,10;UBERON:0005728,1.21e-09,10;UBERON:0000926,9.42e-09,315;UBERON:0004120,9.42e-09,315;UBERON:0006603,9.42e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,1.23350366406548,0,3.45230870786581,3.58624989140741,3.31075121844019,0.689491361473237,0,0,0,0,0,0.918251677112708,0,0,4.28806690242731,2.59302754908121,3.83602275479425,0,2.26954089876456,1.24564449799115,3.26623264833766,2.08593167368081,1.52032191293582,0,0.368277635987565,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21911611751088,5.74628133087582,4.91944453919801,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.738651018262192,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3782395038218,2.96553453471607,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0.654261577023377,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p9@CDKN1A | |||
}} |
Revision as of 11:39, 22 January 2014
Short description: | p9@CDKN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CDKN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -193bp_to_NM_001220777_5end |
EntrezGene: | CDKN1A |
HGNC: | 1784 |
UniProt: | P38936Q6FI05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.17e-40 | 59 |
monocyte | 4.17e-40 | 59 |
monoblast | 4.17e-40 | 59 |
promonocyte | 4.17e-40 | 59 |
macrophage dendritic cell progenitor | 9.67e-39 | 61 |
classical monocyte | 8.52e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.52e-38 | 42 |
myeloid leukocyte | 6.84e-37 | 72 |
myeloid lineage restricted progenitor cell | 1.11e-35 | 66 |
granulocyte monocyte progenitor cell | 3.99e-35 | 67 |
defensive cell | 7.69e-33 | 48 |
phagocyte | 7.69e-33 | 48 |
myeloid cell | 6.40e-24 | 108 |
common myeloid progenitor | 6.40e-24 | 108 |
hematopoietic cell | 8.29e-20 | 177 |
nongranular leukocyte | 1.25e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-18 | 120 |
leukocyte | 1.58e-18 | 136 |
immature conventional dendritic cell | 4.52e-16 | 5 |
common dendritic progenitor | 4.52e-16 | 5 |
hematopoietic oligopotent progenitor cell | 2.79e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-15 | 161 |
hematopoietic stem cell | 1.53e-14 | 168 |
conventional dendritic cell | 6.69e-11 | 8 |
dendritic cell | 5.19e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.36e-34 | 98 |
blood island | 8.36e-34 | 98 |
bone marrow | 9.38e-31 | 76 |
hemolymphoid system | 1.78e-30 | 108 |
bone element | 2.30e-28 | 82 |
skeletal element | 1.14e-25 | 90 |
immune system | 8.94e-25 | 93 |
skeletal system | 6.77e-23 | 100 |
lateral plate mesoderm | 4.44e-15 | 203 |
musculoskeletal system | 8.42e-13 | 167 |
umbilical cord | 1.21e-09 | 10 |
blastocyst | 1.21e-09 | 10 |
blastula | 1.21e-09 | 10 |
bilaminar disc | 1.21e-09 | 10 |
inner cell mass | 1.21e-09 | 10 |
cleaving embryo | 1.21e-09 | 10 |
connecting stalk | 1.21e-09 | 10 |
inner cell mass derived epiblast | 1.21e-09 | 10 |
extraembryonic mesoderm | 1.21e-09 | 10 |
mesoderm | 9.42e-09 | 315 |
mesoderm-derived structure | 9.42e-09 | 315 |
presumptive mesoderm | 9.42e-09 | 315 |