FFCP PHASE1:Hg19::chr6:79787902..79787958,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55023 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15673 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WWQ0 | |||
|association_with_transcript=0bp_to_ENST00000275034_5end | |||
|coexpression_cluster_id=C3712 | |||
|description=CAGE_peak_1_at_PHIP_5end | |||
|id=chr6:79787902..79787958,- | |||
|ontology_enrichment_celltype=CL:0000037!1.74e-32!172;CL:0000566!1.74e-32!172;CL:0000738!2.08e-29!140;CL:0002032!4.80e-29!165;CL:0000837!4.80e-29!165;CL:0000988!5.01e-29!182;CL:0002031!1.76e-23!124;CL:0002087!6.20e-23!119;CL:0000542!2.68e-17!53;CL:0000051!2.68e-17!53;CL:0000838!6.86e-17!52;CL:0000763!8.44e-13!112;CL:0000049!8.44e-13!112;CL:0000766!9.22e-11!76;CL:0000084!9.95e-11!25;CL:0000827!9.95e-11!25;CL:0000791!1.38e-09!18;CL:0000789!1.38e-09!18;CL:0002420!1.38e-09!18;CL:0002419!1.38e-09!18;CL:0000790!1.38e-09!18;CL:0000557!1.28e-08!71;CL:0000839!2.83e-08!70;CL:0000236!3.95e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.23e-11;53!CL:0000084;8.80e-11;25!CL:0000791;1.29e-09;18!CL:0000789;1.29e-09;18!CL:0002419;1.29e-09;18!CL:0002087;6.43e-08;104!CL:0000236;2.76e-07;13!CL:0000738;9.77e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.59e-32,168;CL:0000988,1.17e-29,177;CL:0000738,1.57e-29,136;CL:0002032,4.52e-29,161;CL:0000837,4.52e-29,161;CL:0002031,1.39e-23,120;CL:0002087,4.75e-23,115;CL:0000542,2.68e-17,53;CL:0000051,2.68e-17,53;CL:0000838,6.86e-17,52;CL:0000763,8.94e-13,108;CL:0000049,8.94e-13,108;CL:0000766,8.34e-11,72;CL:0000084,9.95e-11,25;CL:0000827,9.95e-11,25;CL:0000791,1.38e-09,18;CL:0000789,1.38e-09,18;CL:0002420,1.38e-09,18;CL:0002419,1.38e-09,18;CL:0000790,1.38e-09,18;CL:0000557,1.26e-08,67;CL:0000839,2.83e-08,66;CL:0000236,3.95e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;6.23e-11;53!CL:0000790;1.29e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-12!115;UBERON:0002390!3.91e-11!102;UBERON:0003061!3.91e-11!102;UBERON:0002193!4.07e-09!112;UBERON:0001017!1.13e-08!82;UBERON:0000073!1.00e-07!94;UBERON:0001016!1.00e-07!94;UBERON:0005743!1.24e-07!86;UBERON:0001049!1.63e-07!57;UBERON:0005068!1.63e-07!57;UBERON:0006241!1.63e-07!57;UBERON:0007135!1.63e-07!57;UBERON:0003080!5.59e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.64e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.47e-12,114;UBERON:0002390,4.17e-11,98;UBERON:0003061,4.17e-11,98;UBERON:0002193,4.80e-09,108;UBERON:0001016,2.29e-08,89;UBERON:0001017,2.55e-08,81;UBERON:0001049,3.83e-07,56;UBERON:0005068,3.83e-07,56;UBERON:0006241,3.83e-07,56;UBERON:0007135,3.83e-07,56 | |||
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| |||
|short_description=p1@PHIP | |||
}} |
Revision as of 12:46, 22 January 2014
Short description: | p1@PHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHIP_5end |
Coexpression cluster: | C3712_granulocyte_Neutrophils_embryonic_non_Eosinophils_CD19_rectum |
Association with transcript: | 0bp_to_ENST00000275034_5end |
EntrezGene: | PHIP |
HGNC: | 15673 |
UniProt: | Q8WWQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.59e-32 | 168 |
hematopoietic cell | 1.17e-29 | 177 |
leukocyte | 1.57e-29 | 136 |
hematopoietic oligopotent progenitor cell | 4.52e-29 | 161 |
hematopoietic multipotent progenitor cell | 4.52e-29 | 161 |
hematopoietic lineage restricted progenitor cell | 1.39e-23 | 120 |
nongranular leukocyte | 4.75e-23 | 115 |
lymphocyte | 2.68e-17 | 53 |
common lymphoid progenitor | 2.68e-17 | 53 |
lymphoid lineage restricted progenitor cell | 6.86e-17 | 52 |
myeloid cell | 8.94e-13 | 108 |
common myeloid progenitor | 8.94e-13 | 108 |
myeloid leukocyte | 8.34e-11 | 72 |
T cell | 9.95e-11 | 25 |
pro-T cell | 9.95e-11 | 25 |
mature alpha-beta T cell | 1.38e-09 | 18 |
alpha-beta T cell | 1.38e-09 | 18 |
immature T cell | 1.38e-09 | 18 |
mature T cell | 1.38e-09 | 18 |
immature alpha-beta T cell | 1.38e-09 | 18 |
granulocyte monocyte progenitor cell | 1.26e-08 | 67 |
myeloid lineage restricted progenitor cell | 2.83e-08 | 66 |
B cell | 3.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.47e-12 | 114 |
hematopoietic system | 4.17e-11 | 98 |
blood island | 4.17e-11 | 98 |
hemolymphoid system | 4.80e-09 | 108 |
nervous system | 2.29e-08 | 89 |
central nervous system | 2.55e-08 | 81 |
neural tube | 3.83e-07 | 56 |
neural rod | 3.83e-07 | 56 |
future spinal cord | 3.83e-07 | 56 |
neural keel | 3.83e-07 | 56 |