FFCP PHASE1:Hg19::chr7:27135705..27135768,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37117 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000429611,ENST00000434063,NR_038366,NR_038367,uc003syg.2_5end | |||
|coexpression_cluster_id=C1317 | |||
|description=CAGE_peak_2_at_HOTAIRM1_5end | |||
|id=chr7:27135705..27135768,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.22e-43!140;CL:0000037!4.51e-35!172;CL:0000566!4.51e-35!172;CL:0002031!5.71e-35!124;CL:0002087!8.34e-35!119;CL:0000766!9.05e-34!76;CL:0002032!1.55e-33!165;CL:0000837!1.55e-33!165;CL:0000988!3.93e-32!182;CL:0000557!5.93e-29!71;CL:0002009!5.54e-28!65;CL:0002057!1.84e-27!42;CL:0002194!6.88e-27!63;CL:0000576!6.88e-27!63;CL:0000040!6.88e-27!63;CL:0000559!6.88e-27!63;CL:0000839!7.20e-27!70;CL:0000860!4.69e-26!45;CL:0000763!7.95e-25!112;CL:0000049!7.95e-25!112;CL:0000134!5.58e-14!358;CL:0002320!2.74e-13!365;CL:0000219!4.75e-10!390;CL:0000791!9.36e-09!18;CL:0000789!9.36e-09!18;CL:0002420!9.36e-09!18;CL:0002419!9.36e-09!18;CL:0000790!9.36e-09!18;CL:0000723!1.53e-08!436;CL:0000048!1.57e-08!430;CL:0000838!2.63e-08!52;CL:0000542!3.55e-08!53;CL:0000051!3.55e-08!53;CL:0000034!3.96e-08!444;CL:0002393!2.21e-07!9;CL:0002397!2.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.47e-20;33!CL:0002057;5.47e-20;33!CL:0000576;1.09e-17;48!CL:0000473;7.93e-17;39!CL:0000234;7.93e-17;39!CL:0000766;5.50e-16;69!CL:0002087;1.51e-10;104!CL:0000738;2.93e-10;136!CL:0000791;6.37e-09;18!CL:0000789;6.37e-09;18!CL:0002419;6.37e-09;18!CL:0000763;2.90e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.62e-46,136;CL:0000037,5.33e-37,168;CL:0002087,8.40e-37,115;CL:0002031,8.73e-37,120;CL:0000766,3.05e-36,72;CL:0002032,1.94e-35,161;CL:0000837,1.94e-35,161;CL:0000988,3.24e-34,177;CL:0000557,3.40e-31,67;CL:0002009,2.58e-30,61;CL:0002194,3.45e-29,59;CL:0000576,3.45e-29,59;CL:0000040,3.45e-29,59;CL:0000559,3.45e-29,59;CL:0000839,8.03e-29,66;CL:0000473,5.05e-28,48;CL:0000234,5.05e-28,48;CL:0000860,6.44e-28,42;CL:0002057,6.44e-28,42;CL:0000763,1.56e-26,108;CL:0000049,1.56e-26,108;CL:0000134,8.00e-15,354;CL:0002320,4.57e-14,361;CL:0000219,6.17e-11,386;CL:0000723,5.19e-09,433;CL:0000048,5.34e-09,427;CL:0000791,7.00e-09,18;CL:0000789,7.00e-09,18;CL:0002420,7.00e-09,18;CL:0002419,7.00e-09,18;CL:0000790,7.00e-09,18;CL:0000838,1.50e-08,52;CL:0000034,1.83e-08,441;CL:0000542,2.05e-08,53;CL:0000051,2.05e-08,53;CL:0002393,1.75e-07,9;CL:0002397,1.75e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.56e-20;42!CL:0000790;6.37e-09;18!CL:0000049;3.66e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.93e-36!102;UBERON:0003061!2.93e-36!102;UBERON:0002193!1.23e-34!112;UBERON:0002371!2.65e-29!80;UBERON:0001474!8.07e-27!86;UBERON:0002405!1.29e-18!115;UBERON:0004765!3.17e-18!101;UBERON:0001434!3.17e-18!101;UBERON:0002384!1.42e-13!375;UBERON:0003081!3.03e-13!216;UBERON:0002204!1.32e-09!167;UBERON:0000178!5.78e-08!15;UBERON:0000179!5.78e-08!15;UBERON:0000463!5.78e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.97e-08;15!UBERON:0000179;3.97e-08;15!UBERON:0000463;3.97e-08;15!UBERON:0002390;1.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.29e-38,98;UBERON:0003061,2.29e-38,98;UBERON:0002193,1.63e-36,108;UBERON:0002371,2.30e-31,76;UBERON:0002405,3.10e-29,93;UBERON:0001474,1.01e-28,82;UBERON:0004765,1.74e-24,90;UBERON:0001434,2.85e-19,100;UBERON:0002384,2.56e-14,371;UBERON:0003081,3.53e-14,203;UBERON:0000926,1.17e-09,315;UBERON:0004120,1.17e-09,315;UBERON:0006603,1.17e-09,315;UBERON:0002204,1.18e-09,167;UBERON:0000178,4.46e-08,15;UBERON:0000179,4.46e-08,15;UBERON:0000463,4.46e-08,15 | |||
|phase1_expression=4.36028110249336,3.42560838225573,2.11431606143957,5.00366491765652,3.5756887554183,7.85104671690332,0,4.42203911398782,3.65659879479774,0.737201809504527,0,0.655324116390517,3.16520373874144,2.97039247104112,3.31397375727916,3.36162573225888,5.42425075221579,1.46062018077475,4.87932798790507,0.492484232307152,1.63200552995402,1.25381888591235,0,0,0,4.27915072188527,3.11982239909794,4.32909297225236,66.8719270643137,31.4740106439714,38.704030829019,1.83884244895785,2.409647350226,4.43704812200145,2.55641761914995,3.69640004467296,2.34880351467878,38.2256831886995,38.1034450193269,39.2789675995692,6.26963327871788,4.85840499028469,6.69696475848885,33.2961966805203,26.0734401145279,32.991432321543,40.9075104954005,28.370584273506,40.8812409581537,67.0323274110611,39.4487488054815,63.6137198400294,68.6043904665871,51.6387746867061,51.4620649058499,42.9192534157139,26.471896555611,36.1804809956586,50.5038422411989,34.339405897142,37.7208904221434,39.2523047222192,35.1056037414072,31.9668562899521,49.6257798054879,25.5323351111013,32.3867569477699,75.6258482422797,56.8416381078019,76.2332844914959,52.6697567291031,41.2470952306072,55.6973801895957,85.5583909563364,76.9627565873458,80.299261229708,67.62183595019,61.8728798507006,56.4146809306751,141.651333639401,94.2865049923687,88.4094504220828,7.03984977845291,10.3766336139805,8.00558328477199,5.9742231159311,9.6095036888643,8.04653415936277,10.5767179645578,12.4026988089597,14.7995371968457,11.1575065980478,20.6427543187624,7.93027971474155,11.7706798226123,2.63384084775077,11.9992959769438,15.7204305099666,11.9248869419715,6.8546463110178,20.5331027979162,13.2565385605725,5.84480185223734,9.6927097490101,43.6016743062759,30.3501435579561,22.7475245562613,4.86747014957566,6.76308607311367,6.24864037493969,8.29050053357545,9.85330491499179,11.7146384898028,5.61835738988397,14.6349733326968,7.81834464613207,36.0227263985806,25.084803520232,15.4342012131897,7.64556994377832,10.4173352617027,9.50452044448374,9.78738274005523,13.3106075600595,12.4930726552346,12.5491943583329,18.8859439291841,12.0964045934839,22.1975362500311,8.68946423296794,2.43806866313962,0.670700859703636,0.12786256184353,1.44575660953827,2.00535164254356,3.76600949298142,0,0.973269740605272,0,0,0.263504357079378,2.81605012320082,0.364295288292542,0.741568885568859,11.3591587779139,11.3184329244524,8.24339355216964,4.29283123749616,2.85997455390064,3.71457501329565,2.78267370313387,0.860234595106124,1.73570250803797,3.39184765154406,3.77549492588915,2.20094433552054,1.67195973229448,3.87625138753993,2.49036383880697,2.34304428935269,2.81980521976403,5.32190474002959,6.10155143870424,1.47065232138347,0,3.30408994651095,4.4905874525234,3.15312145353302,1.53316637465883,2.84779697870439,3.29763139074733,81.7038588103592,259.812776979378,8.72188104285069,2.98183171017191,1.01304409331664,7.0176865831006,8.03142538096678,2.83734705758686,0,0,0,0,0.404132016209064,0.653847612453835,0,0,0,0,0,6.12739590262384,0.822041490506354,0.809364721840658,0.98315564691574,0.408308342509787,0,0.309977343527296,0,0,1.82032272387605,5.74894513452991,0,0.125118519871964,0,0,0,0.300476117813194,0.340296549480063,1.97328599257748,2.98980344345994,3.81477422087211,4.50136644126603,2.67936576019941,5.15281080091258,3.16398655763703,4.05063197379039,3.31285817548075,4.29137416214995,2.66944706062668,0,5.32514388774922,1.61203357164224,0.847802961552438,2.70565194428616,0.272746120590835,0.860413786167011,0.121973706129595,0.397589304964456,0.464775771478074,1.55491582523056,0.252320850875628,0,0,0,0,4.64367928031979,7.21879481669586,3.07597680103594,3.70886318171824,1.20505514941741,4.85293480022533,1.96091499683166,3.08451804844426,4.58426447744559,3.53198637225623,1.53898862778556,2.21446636387394,0,0.4115740113314,2.94017422771084,1.26755034821831,1.96565443335525,1.77236972004421,6.62194649121976,1.8448265781467,0,3.73150970389327,4.49607013030478,5.62962245505133,1.20364978706088,0,0,0,0,0,2.30986316417718,2.31492756288305,2.85381228351897,7.90204397959275,2.57545848628462,3.69325509131096,3.97807250736704,3.86441021950693,0,0,0,12.7173102238045,3.19697332365358,4.21720947081732,9.85326475791887,13.9997010081029,5.59785911960085,11.6737162267739,6.56460653817176,2.47641787739459,2.29193055334967,2.34434894420094,0,1.85089486865982,3.90445975197093,2.00078502841405,0,0,0.07333828582095,6.20504235637333,10.7296933755565,1.690605505112,1.59562869950922,0,2.31486636835928,2.83698264046557,4.26275486425759,2.28764789853036,1.08524321078289,3.29296134712308,3.25736184293735,2.13235169245527,4.75171123760058,1.50719688529793,3.48613383440118,2.7992437530976,8.51366464488333,12.5564272858032,6.32501818449095,0,0,4.27910715122155,4.05387658669222,3.6985738059069,1.79060963239896,4.25923547175404,20.2941683007985,25.2284262585635,18.866426333123,0.508189248444927,0,0,0,0,78.6457375144542,32.9077605124427,38.9550582629873,1.34960640891054,4.50153468953709,1.35632511849868,0.207970861530807,0,0,0,1.805676598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| |||
|short_description=p2@HOTAIRM1 | |||
}} |
Revision as of 16:10, 22 January 2014
Short description: | p2@HOTAIRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOTAIRM1_5end |
Coexpression cluster: | C1317_Eosinophils_CD14CD16_CD14_Neutrophils_Basophils_Peripheral_CD4 |
Association with transcript: | 0bp_to_ENST00000429611, ENST00000434063, NR_038366, NR_038367, uc003syg.2_5end |
EntrezGene: | HOTAIRM1 |
HGNC: | 37117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.29e-38 | 98 |
blood island | 2.29e-38 | 98 |
hemolymphoid system | 1.63e-36 | 108 |
bone marrow | 2.30e-31 | 76 |
immune system | 3.10e-29 | 93 |
bone element | 1.01e-28 | 82 |
skeletal element | 1.74e-24 | 90 |
skeletal system | 2.85e-19 | 100 |
connective tissue | 2.56e-14 | 371 |
lateral plate mesoderm | 3.53e-14 | 203 |
mesoderm | 1.17e-09 | 315 |
mesoderm-derived structure | 1.17e-09 | 315 |
presumptive mesoderm | 1.17e-09 | 315 |
musculoskeletal system | 1.18e-09 | 167 |
blood | 4.46e-08 | 15 |
haemolymphatic fluid | 4.46e-08 | 15 |
organism substance | 4.46e-08 | 15 |