FFCP PHASE1:Hg19::chr9:18474125..18474160,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92949 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14632 | |||
|TSSclassifier=strong | |||
|UniProt=A6NIB9,F8WEP3 | |||
|association_with_transcript=0bp_to_ENST00000380570,ENST00000431052_5end | |||
|coexpression_cluster_id=C4811 | |||
|description=CAGE_peak_1_at_ADAMTSL1_5end | |||
|id=chr9:18474125..18474160,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-46!180;CL:0000057!2.49e-25!75;CL:0000222!3.58e-21!119;CL:0000680!3.76e-20!57;CL:0000056!3.76e-20!57;CL:0000355!3.76e-20!57;CL:0000183!3.43e-19!59;CL:0000187!1.69e-18!54;CL:0000393!1.08e-17!60;CL:0000211!1.08e-17!60;CL:0000192!4.96e-14!42;CL:0000514!4.96e-14!42;CL:0002620!6.58e-13!23;CL:0000220!4.67e-12!246;CL:0000359!5.42e-12!32;CL:0002321!9.92e-12!248;CL:0002371!4.55e-08!591;CL:0002334!9.25e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.90e-14;23!CL:0000359;3.06e-12;32!CL:0000192;1.48e-11;43!CL:0000187;1.77e-11;55!CL:0000057;1.14e-10;73!CL:0000393;7.52e-10;61!CL:0000211;7.52e-10;61!CL:0002320;4.84e-08;188!CL:0002334;2.98e-07;12!CL:0002139;5.03e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.04e-28,76;CL:0000680,2.33e-22,58;CL:0000056,2.33e-22,58;CL:0000355,2.33e-22,58;CL:0000222,1.05e-21,121;CL:0000187,1.52e-20,55;CL:0000393,1.09e-18,61;CL:0000211,1.09e-18,61;CL:0000192,1.21e-15,43;CL:0000514,1.21e-15,43;CL:0002620,4.06e-14,23;CL:0000359,5.73e-13,32;CL:0002321,8.33e-10,250;CL:0000048,1.04e-09,427;CL:0000723,1.82e-09,433;CL:0000034,2.76e-08,441;CL:0002334,3.00e-07,12;CL:0002139,5.06e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000355;5.19e-12;58!CL:0000514;1.48e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.25e-26!83;UBERON:0002329!5.25e-26!83;UBERON:0003077!5.25e-26!83;UBERON:0003059!5.25e-26!83;UBERON:0007282!5.25e-26!83;UBERON:0009618!5.25e-26!83;UBERON:0007285!5.25e-26!83;UBERON:0004290!4.16e-23!70;UBERON:0002049!1.09e-22!79;UBERON:0007798!1.09e-22!79;UBERON:0000486!1.10e-19!82;UBERON:0001134!2.30e-19!61;UBERON:0002036!2.30e-19!61;UBERON:0003082!2.30e-19!61;UBERON:0000055!2.47e-19!69;UBERON:0002385!2.61e-19!63;UBERON:0001015!2.61e-19!63;UBERON:0000383!2.61e-19!63;UBERON:0004872!3.65e-19!84;UBERON:0001981!8.12e-18!60;UBERON:0007500!8.12e-18!60;UBERON:0004537!8.12e-18!60;UBERON:0006965!8.12e-18!60;UBERON:0004535!4.47e-16!110;UBERON:0005256!8.06e-16!143;UBERON:0001009!1.11e-15!113;UBERON:0001637!6.14e-15!42;UBERON:0003509!6.14e-15!42;UBERON:0004572!6.14e-15!42;UBERON:0000475!1.60e-14!365;UBERON:0003914!1.35e-12!118;UBERON:0004573!1.54e-12!33;UBERON:0004571!1.54e-12!33;UBERON:0000490!3.56e-12!138;UBERON:0000119!6.43e-12!312;UBERON:0000468!7.59e-12!659;UBERON:0000483!1.78e-11!309;UBERON:0002199!2.70e-11!45;UBERON:0002416!2.70e-11!45;UBERON:0003102!2.83e-10!95;UBERON:0002097!7.11e-10!40;UBERON:0002100!9.90e-10!216;UBERON:0000481!1.25e-09!347;UBERON:0000467!4.93e-09!625;UBERON:0000480!7.43e-09!626;UBERON:0000947!1.08e-08!21;UBERON:0010191!1.08e-08!21;UBERON:0000477!1.18e-08!286;UBERON:0003104!3.52e-07!238;UBERON:0009142!3.52e-07!238;UBERON:0004111!9.01e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.34e-12;33!UBERON:0004571;1.34e-12;33!UBERON:0001637;3.73e-12;42!UBERON:0003509;3.73e-12;42!UBERON:0004572;3.73e-12;42!UBERON:0007500;4.74e-11;56!UBERON:0001981;4.74e-11;56!UBERON:0004537;4.74e-11;56!UBERON:0002385;1.09e-10;31!UBERON:0001015;1.09e-10;31!UBERON:0000383;1.09e-10;31!UBERON:0000055;1.55e-10;65!UBERON:0002049;1.77e-10;75!UBERON:0007798;1.77e-10;75!UBERON:0000947;2.33e-09;21!UBERON:0010191;2.33e-09;21!UBERON:0002199;8.38e-09;46!UBERON:0002416;8.38e-09;46!UBERON:0002097;1.06e-08;41!UBERON:0002204;1.82e-08;70!UBERON:0003914;9.36e-08;74!UBERON:0003102;1.04e-07;50!UBERON:0002384;3.63e-07;198!UBERON:0001013;4.41e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.79e-25,71;UBERON:0003059,2.79e-25,71;UBERON:0007282,2.79e-25,71;UBERON:0004290,2.79e-25,71;UBERON:0009618,2.79e-25,71;UBERON:0007503,7.64e-25,78;UBERON:0007524,7.74e-25,73;UBERON:0003077,1.65e-24,72;UBERON:0007285,1.65e-24,72;UBERON:0002049,1.65e-23,78;UBERON:0007798,1.65e-23,78;UBERON:0000486,2.20e-21,83;UBERON:0001134,3.50e-21,62;UBERON:0002036,3.50e-21,62;UBERON:0003082,3.50e-21,62;UBERON:0002385,3.98e-21,64;UBERON:0001015,3.98e-21,64;UBERON:0000383,3.98e-21,64;UBERON:0000055,5.66e-20,68;UBERON:0004872,1.29e-19,83;UBERON:0007500,3.40e-18,59;UBERON:0001981,3.40e-18,59;UBERON:0004537,3.40e-18,59;UBERON:0006965,3.40e-18,59;UBERON:0004535,7.91e-18,109;UBERON:0001009,1.68e-16,112;UBERON:0000490,3.35e-16,148;UBERON:0001637,3.44e-16,42;UBERON:0003509,3.44e-16,42;UBERON:0004572,3.44e-16,42;UBERON:0003104,2.12e-15,160;UBERON:0009142,2.12e-15,160;UBERON:0005256,2.78e-14,122;UBERON:0004573,1.45e-13,33;UBERON:0004571,1.45e-13,33;UBERON:0002199,5.89e-13,46;UBERON:0002416,5.89e-13,46;UBERON:0003914,7.42e-13,117;UBERON:0002097,2.17e-11,41;UBERON:0003102,3.15e-11,99;UBERON:0000926,1.46e-10,315;UBERON:0004120,1.46e-10,315;UBERON:0006603,1.46e-10,315;UBERON:0000119,5.32e-10,309;UBERON:0000483,1.41e-09,306;UBERON:0000947,2.33e-09,21;UBERON:0010191,2.33e-09,21;UBERON:0002100,5.43e-08,199;UBERON:0001013,4.07e-07,14 | |||
|phase1_expression=6.90377841228115,11.9896293378951,4.36958652697511,5.00366491765652,0.893922188854576,13.9574163856059,2.53299878168311,16.4247167090976,11.7533532689927,3.19454117451962,0,0,0,59.6553821267425,45.0700430989965,22.1867298329086,16.8754467846714,18.2577522596843,15.1259167625057,50.479633811483,54.4681845622155,36.3607476914582,19.4640471249119,24.5005220880463,10.4200390863686,0,0,0,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,8.71911117614727,5.4980901592718,66.8662431911448,55.1471701699478,42.729723093443,8.74814541756209,14.1124112387764,12.9512699514773,12.195116860441,10.1010003547095,4.84622579341537,0.364295288292542,0.370784442784429,0,0,0,0,0,0,13.1183188862025,20.645630282547,10.0670745466202,12.4367747223282,20.1359729380755,8.25354125820202,16.9285922894817,19.639673696869,19.9229107104558,9.70689777017544,12.8905381474927,12.9246257972147,8.29810995663776,27.5747310259402,14.5825550618717,9.82297011124877,6.06229306090659,5.74318550464943,10.7321646226118,44.6154859997021,14.4729377705022,0,0,0.436094052142534,23.35768172968,30.7712143344929,127.377631942316,164.931056930568,36.8855117486291,13.4562624034154,2.1349799145941,6.166688710429,21.7847724779836,8.89090435659941,11.6057951210556,9.83823279692054,7.49028701823999,59.5176436857843,35.8984088354869,23.3893446833224,31.8325689575336,46.6214959615747,48.4000103660713,41.8543403972701,26.3358880918812,24.4440291450418,15.2922156140133,8.31602000097437,2.22540236350701,94.6567816415547,57.4894513452991,21.8836948140286,19.6436076198984,11.9137569658199,20.6319481813994,25.7449748471176,9.01428353439581,7.71338845488143,223.698875704011,98.8770710229967,95.1574236206433,210.063767259082,64.7169883617396,161.025337528518,77.610729090273,428.185554896092,152.586350082437,236.530446466735,121.597916106477,144.349928739199,390.510551768276,114.353631488372,49.8508141392834,1.54608682530637,1.09098448236334,2.29443676311203,0,0.132529768321485,0.348581828608555,0.207322110030741,0.252320850875628,2.91981887260664,29.725411142665,9.00537313470039,34.5337303381201,37.1494342425583,68.5785507586106,0,0,0.241011029883482,0,0,0,0,0,0,0.738155454624648,22.4386838085513,6.5851841813024,10.2906097969879,0,0,2.36315962672562,0,0,6.6911446016425,0.658501712451753,1.1240175325762,0,1.66659201285353,28.0195142566879,23.9185000614303,10.1031939417691,4.9850074139283,15.7327650276001,8.95071976118658,11.5746378144153,2.47330397904978,0,0,0,0,0,3.74935335947108,2.35174979478403,4.25325291727159,0.895585227028483,0.290633938513962,1.91691339582606,0,0,2.07328115540772,0.288239906833923,0.12624243342638,0,0,0,10.2643467613623,1.33675740514321,0,0,13.4557301214433,3.48768055066624,9.8273303000073,64.2480427316155,71.5312891703765,31.276201844572,1.06375246633948,0,49.6410232325934,38.2992656462851,63.1420564268156,0.57191197463259,20.6196210048748,24.6972101034231,29.9677289550236,0.355391948742546,2.37585561880029,0.602878754119172,2.61460037580088,0.199945982364114,0,0,0,2.63587341040741,3.44585807502342,68.4657144195448,55.0168965336801,52.1909859277974,62.6713371339635,0,0,0,0,3.30323011489202,0,0.773288812777695,1.67516265334349,0.637938751653163,0,0,0,55.3338627653321,96.032740043458,37.1633082468638,5.19927153827018,20.6977627004708,8.51593041183247,31.862464878018,31.9002865711382,18.1926003244788,24.8335371102012,81.0355230213233,50.5171521804267,14.5095636161698,15.6640925970192,9.95115929051482,0,0,0,0,4.99306318531491,3.93107381328584,35.7275243259039,106.656071435203,38.4504329373311,10.1229927912004,42.9834089216031,11.2597744800525,13.3576259800492,49.1928923230471,55.7543817483219,100.277257492861,38.9440821887716,65.1940223160371,0,0,0,4.13332013392584,9.46874073634929,8.26083814244372,2.25599806453706,0.462092022626489,5.49044838423799,2.92278449306521,1.05551628892876,2.27466768141793,8.84487267437881,5.82972973475776,4.62681758070868,7.04460737614017,4.51520796469368,1.01950509218015,1.66215201785745,9.17886494360931,0,0,1.28225062558195,1.31205858279882,0,0.9273691048295,0,0,1.14853107599234,1.30012049207304,67.487250534547,63.1259790447556,38.3581056615465,30.2402239210475,30.4618825190813,47.1574874971721,38.4294238872706,46.3632853143589,55.5559902435641,0.165284915360978,0,0.510450849978337,0,4.64845549297286,210.924272376529,27.1844535362634,46.8211041867655,21.2922412126809,46.9763815720539,51.7054571299937,3.43499728180779,8.18748412591268,33.8525984449037,8.95961911441977,45.5498068534174,31.6674851145101,87.1876899317067,5.49464048139461,14.2099241490819,10.9814811894422,14.8443626955565,19.207335749465,20.6063417524911,9.26768603725758,1.95053495635836,39.4815853202681,47.5425660405399,5.86949619054339,1.69686518344455,107.357710789231,39.1469393917748,28.5278759353724,15.7842318691355,38.19918526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| |||
|short_description=p1@ADAMTSL1 | |||
}} |
Revision as of 00:57, 23 January 2014
Short description: | p1@ADAMTSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTSL1_5end |
Coexpression cluster: | C4811_Fibroblast_extraskeletal_leiomyoma_Smooth_giant_mesenchymal_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000380570, ENST00000431052_5end |
EntrezGene: | ADAMTSL1 |
HGNC: | 14632 |
UniProt: | A6NIB9F8WEP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.04e-28 | 76 |
muscle precursor cell | 2.33e-22 | 58 |
myoblast | 2.33e-22 | 58 |
multi-potent skeletal muscle stem cell | 2.33e-22 | 58 |
mesodermal cell | 1.05e-21 | 121 |
muscle cell | 1.52e-20 | 55 |
electrically responsive cell | 1.09e-18 | 61 |
electrically active cell | 1.09e-18 | 61 |
smooth muscle cell | 1.21e-15 | 43 |
smooth muscle myoblast | 1.21e-15 | 43 |
skin fibroblast | 4.06e-14 | 23 |
vascular associated smooth muscle cell | 5.73e-13 | 32 |
embryonic cell | 8.33e-10 | 250 |
multi fate stem cell | 1.04e-09 | 427 |
somatic stem cell | 1.82e-09 | 433 |
stem cell | 2.76e-08 | 441 |
preadipocyte | 3.00e-07 | 12 |
endothelial cell of vascular tree | 5.06e-07 | 24 |