FFCP PHASE1:Hg19::chr9:116917765..116917795,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85301 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22986 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IZC6 | |||
|association_with_transcript=-44bp_to_ENST00000356083_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_COL27A1_5end | |||
|id=chr9:116917765..116917795,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!1.29e-15!173;UBERON:0006601!1.29e-15!173;UBERON:0002346!1.56e-15!90;UBERON:0007023!3.77e-15!115;UBERON:0001017!3.98e-15!82;UBERON:0001049!4.41e-15!57;UBERON:0005068!4.41e-15!57;UBERON:0006241!4.41e-15!57;UBERON:0007135!4.41e-15!57;UBERON:0004121!7.86e-15!169;UBERON:0003075!1.00e-14!86;UBERON:0007284!1.00e-14!86;UBERON:0005743!1.40e-14!86;UBERON:0000073!1.24e-13!94;UBERON:0001016!1.24e-13!94;UBERON:0000153!1.74e-13!129;UBERON:0007811!1.74e-13!129;UBERON:0000033!2.04e-13!123;UBERON:0000955!5.62e-13!69;UBERON:0006238!5.62e-13!69;UBERON:0000481!6.93e-12!347;UBERON:0000468!2.32e-11!659;UBERON:0002616!2.55e-11!59;UBERON:0000922!4.16e-11!612;UBERON:0002020!2.78e-10!34;UBERON:0003528!2.78e-10!34;UBERON:0000475!3.79e-10!365;UBERON:0002780!4.74e-10!41;UBERON:0001890!4.74e-10!41;UBERON:0006240!4.74e-10!41;UBERON:0000467!5.82e-10!625;UBERON:0000480!8.64e-10!626;UBERON:0000062!9.30e-10!511;UBERON:0002050!1.39e-09!605;UBERON:0005423!1.39e-09!605;UBERON:0003080!1.81e-09!42;UBERON:0003056!1.98e-09!61;UBERON:0002791!2.14e-09!33;UBERON:0001893!2.35e-09!34;UBERON:0000923!3.09e-09!604;UBERON:0005291!3.09e-09!604;UBERON:0006598!3.09e-09!604;UBERON:0002532!3.09e-09!604;UBERON:0001869!6.40e-09!32;UBERON:0000483!7.11e-09!309;UBERON:0000119!9.26e-09!312;UBERON:0000477!1.14e-08!286;UBERON:0000064!1.33e-08!219;UBERON:0004111!6.38e-08!241;UBERON:0003076!2.33e-07!15;UBERON:0003057!2.33e-07!15;UBERON:0000956!6.34e-07!25;UBERON:0000203!6.34e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;3.91e-08;4!UBERON:0000922;1.63e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.38e-11,56;UBERON:0005068,1.38e-11,56;UBERON:0006241,1.38e-11,56;UBERON:0007135,1.38e-11,56;UBERON:0001017,1.74e-11,81;UBERON:0007023,3.09e-11,114;UBERON:0000955,3.32e-11,68;UBERON:0006238,3.32e-11,68;UBERON:0001016,1.60e-10,89;UBERON:0004121,4.41e-10,171;UBERON:0000924,4.41e-10,171;UBERON:0006601,4.41e-10,171;UBERON:0000073,6.75e-10,53;UBERON:0002616,6.75e-10,53;UBERON:0002346,1.15e-09,86;UBERON:0003075,1.68e-09,82;UBERON:0007284,1.68e-09,82;UBERON:0010371,4.60e-09,104;UBERON:0005904,1.57e-08,4;UBERON:0003076,2.99e-08,15;UBERON:0003057,2.99e-08,15;UBERON:0006947,6.88e-07,3;UBERON:0004054,6.88e-07,3;UBERON:0003528,8.80e-07,34;UBERON:0002020,8.80e-07,34 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0.572471974262113,0.821246550437305,2.25976751270645,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,1.45990461090791,0.567208902984407,0.443458794925128,0.702678285545008,1.57174890597255,0,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.44905874525234,0,0,0,0,0,0,0.872188104285069,0,0.25326102332916,1.05927344650575,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0,0.161872944368132,0.280901613404497,0,0.368502951935304,0.413303124703062,2.37600571456411,0.494533858557114,0,0.718618141816238,0.168336113954066,0.750711119231785,0,0,0.612975591598039,0,0,0.717558542755448,0.640672166455702,0,0,0.206105058476878,0.515281080091258,0,0.506328996723799,0.194874010322397,0.504867548488229,0.460249493211497,0.323292113637624,0.355009592516614,0.201504196455281,0.169560592310488,0.57978255948989,0,0.286804595389004,0.365921118388786,0.397589304964456,0.348581828608555,0.932949495138334,0.504641701751257,0,0,0,1.38134921352481,0.928735856063958,0,0.946454400318751,0.337169380156203,0,0.330881918197182,0.653638332277218,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0.8231480226628,0,1.26755034821831,2.94848165003288,0.590789906681404,0,0.368965315629341,0.171567810298526,1.20725313949488,1.1240175325762,0.502644862058154,0.277765335475589,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0,3.42991719156694,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0.65147236858747,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,2.03275699377971,0,0.773288812777695,0.167516265334349,0,0,0,0,0.49076596687656,0.500170521059677,0,0.831883446123229,1.24900292158013,0.630809660135739,0.468565659970853,0,0,0,0,0.553107505625109,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0.846016147141356,0.802025881213139,0.0920809889358963,0.114814448164607,0,0.524497659837696,0,0.15403067420883,0.784349769176855,0,0.527758144464379,0,0,0,0,0.270946437543853,3.01013864312912,0.254876273045038,0,0.671624264166535,0,0,0,0,0.325378394664303,0.721287081534056,1.37354197227515,0.495056999523528,0.574265537996172,2.60024098414608,1.6068392984416,0.193341436584244,0.308097234229289,0.307007349452259,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.712256285173899,0.330569830721956,0.384380134730212,2.67986696238627,0.30347334256665,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0.54907405947211,0.589062011728432,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.294747123039363,0,0.354761064070598,0.211107635297664,0,1.13841952129715,0.699869440489966,0.48111056362756,0.670302275535787,0,1.03558180854457,0.43050537267123,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,1.40669416410513,0.333926115068718,0,0,1.9924798825107,0.828851746593443,0.755798243562828,0.613612095012929,0,0,0.0898683511473268,0,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0,0,0.583209226766509,0.520874984799877,1.77148277162768,1.08536794762867,15.2581736317083,24.106278665007,20.9838809457019,0.219385397153973,0.10893846351899,0.697118721393016,5.77126938778478,0.227884111694002,0,0.718061155278177,0.108647371922008,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.282706142867882,0.432777279484182,0,0.265372693510018,1.83309043480088,0.593042257361244,0.370691816839509,0.522109747527277,0.404406797884062,4.01288823649394,0.234264445725339,0,0,0,1.97292201424695,9.67925728389311,0,0.758238955541855,0.300646838828985,0,1.32930774541437,0,0.313932918407225,1.1947242977295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| |||
|short_description=p2@COL27A1 | |||
}} |
Revision as of 02:55, 23 January 2014
Short description: | p2@COL27A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL27A1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -44bp_to_ENST00000356083_5end |
EntrezGene: | COL27A1 |
HGNC: | 22986 |
UniProt: | Q8IZC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.38e-11 | 56 |
neural rod | 1.38e-11 | 56 |
future spinal cord | 1.38e-11 | 56 |
neural keel | 1.38e-11 | 56 |
central nervous system | 1.74e-11 | 81 |
adult organism | 3.09e-11 | 114 |
brain | 3.32e-11 | 68 |
future brain | 3.32e-11 | 68 |
nervous system | 1.60e-10 | 89 |
ectoderm-derived structure | 4.41e-10 | 171 |
ectoderm | 4.41e-10 | 171 |
presumptive ectoderm | 4.41e-10 | 171 |
regional part of nervous system | 6.75e-10 | 53 |
regional part of brain | 6.75e-10 | 53 |
neurectoderm | 1.15e-09 | 86 |
neural plate | 1.68e-09 | 82 |
presumptive neural plate | 1.68e-09 | 82 |
ecto-epithelium | 4.60e-09 | 104 |
duct of male reproductive system | 1.57e-08 | 4 |
posterior neural tube | 2.99e-08 | 15 |
chordal neural plate | 2.99e-08 | 15 |
male genital duct | 6.88e-07 | 3 |
internal male genitalia | 6.88e-07 | 3 |
brain grey matter | 8.80e-07 | 34 |
gray matter | 8.80e-07 | 34 |